Sorex fumeus (smoky shrew): 130029827
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Entry
130029827 CDS
T10594
Symbol
SEC31B
Name
(RefSeq) protein transport protein Sec31B
KO
K14005
protein transport protein SEC31
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
130029827 (SEC31B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfum04131
]
130029827 (SEC31B)
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
sfum02044
]
130029827 (SEC31B)
Membrane trafficking [BR:
sfum04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
130029827 (SEC31B)
Secretion system [BR:
sfum02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
130029827 (SEC31B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
WD40_Prp19
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
WD40
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Beta-prop_EML
TPR_Sec16
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
EIF3I
Motif
Other DBs
NCBI-GeneID:
130029827
NCBI-ProteinID:
XP_055976825
LinkDB
All DBs
Position
Unknown
AA seq
1164 aa
AA seq
DB search
MTMKLKELERPAVQAWSPANQYPVYLATGTSAQQLDASFSTNGTLELFEIDFRDPSLDLK
RKGVLSASCRFHKLVWGSFGNGLLEGSGVLVGGGDNGTLTVYRVAHILSGGKEPVLAQTQ
KHTGPVGALDFNPFQANLLASGASDSEIFIWDLNHLSAPMTPGSKSQPPEDVKALSWNRQ
VQHILSSAHPSGKAVVWDLRKNEPIIKVSDPSSRMRCSGLAWRPDVATQLVLCSEDDRLP
VIQLWDLRFASSPLKVLESHSRGVLSVSWSQADAELLLSSAKDNQILCWNLGSGDVVYWL
PTQSSWCFDVQWCPRDPSVFSATSFDGWIALCSVMGQSWEAQQMRQAEQISASFGEGQPL
PSLQVPERLAPASLIPPLKKAPKWMRRPAGGSFAFGGKLVTFGLPSTPAPQGPQPGPRLV
FISQVTTEPEFLQRAAELRQALGTGTLPSFCQNKIQQAHGDGEKLLWQFLKVTSEQDAKT
KFLKLLGYSKEELQEKVTAWLKRDTLPDESVVPKGDAPAGTRQQLFCRQAPNPPLEGASA
SSAFFDELVPQSLTPWEIPVTEDADGLLCRAILLGQLEAAVKLCLKEERFADAILLAQAG
STDLLKRTQEHYLAKRRTRVSSLLACVVQKNWKSLVCACSLKNWREALAMLLTYSAPEEL
PGLCDMLGMRLEQEGSGALAADARLCYVCSGSVERLVECWAKGDPAPSPMTLQDLMEKVM
VLQRSLQLLRGPEGGSLGPATISSITQYANFLAAQGSLAAALSYLPRDSAQPPIQQLRDR
LFHAQGSSVLGQQAPPFPFPRVFVGAPPRPKDTASYRPGFQPSHQVPAPPPHPRIFTPQS
PLVMPFTPSGPNPYQGPRMQNINDYRPPMPETPQSLPLGPGVSSAIPQPPLMGQEAQAPH
PGGVTGRWPLSAAPPAILQPGPASLPDTPILFPPLPVRPLGPSPDSPQPGLHPPGGPAVP
SFSVLPTAGIAAPLPGSQDSLKNAPAPKGSLWRKQLPETFVPPAPITAPVQSLPPEPRGS
LSSQRPIPVGGHAPPGAPRERSLQPQAPKKTEKKELPTEHQPLKTSFETLLQRCSACATD
LKTKRKLEEAAHRLEGLYEKLCEGTLSPQVLAGLHEVARCVDTGSFEQGLAVHAQVVGCS
TFSEVSGFMPILKAVLTIAHKLHL
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atgaccatgaagctgaaagaactggagcgaccagctgtccaggcgtggagcccagccaac
cagtaccctgtgtatctggccacagggacatctgcccagcagctagatgcgtcctttagc
acaaatggtaccttggaactctttgagatcgatttcagggacccttctttggacttgaaa
cgcaaaggcgtcctttctgcctcctgcaggtttcacaagctggtgtgggggagctttggc
aatgggcttctggaaggctccggggttcttgtcggtggcggggacaatggcacgctgact
gtgtaccgtgtggcccacatcctgtccggcgggaaggagcctgtcctggcccagactcag
aagcacacggggccagtcggggccctcgactttaaccctttccaggccaacctcctggcc
tcgggggccagcgattctgaaatcttcatttgggacttgaatcatctgagcgcgccaatg
accccgggatcgaagtctcagcccccagaagacgtcaaggcactttcctggaaccggcaa
gttcagcacatcttgtcttcagctcacccgagtggcaaggcagtggtgtgggacctccgg
aagaatgaaccgatcatcaaagtcagtgaccccagcagcaggatgcgctgctcgggcctg
gcctggcgcccggacgtcgccacccagctggtgctgtgctcggaagacgaccgactgcct
gtaatccagctgtgggacctgcgcttcgcctcctcgccgctgaaggtgctggagagccac
agcaggggggtcctgtccgtgtcatggagtcaggctgatgccgagctgctgctgagtagc
gccaaggacaaccagatcctgtgctggaacttggggagcggtgatgtggtctactggctg
cccacccagagcagctggtgctttgacgtgcagtggtgccctcgggacccttcggtgttc
tccgccacctccttcgacggctggatcgctctgtgctctgtgatgggtcagagctgggaa
gcccagcagatgagacaggcagagcagatctctgcatccttcggtgaaggtcagcctctc
ccctcactgcaggtgccagagcggctggccccagcatcactgatcccgcccctgaagaag
gctcccaagtggatgagaaggccagcagggggttcatttgcttttggggggaagctggtt
acctttggcctccctagcacccccgcccctcagggaccgcagcctggcccccgccttgtc
ttcatcagccaagtcaccacggagcccgagtttctgcagcgggccgccgagctgcgccag
gcgctggggacgggaaccctccccagtttctgtcagaacaagatccagcaggcgcacggt
gacggcgagaagctgctctggcagttcctgaaggtgacctcagagcaagacgccaaaacg
aaattcttgaagctcttaggatacagtaaagaggagctacaggagaaggtgaccgcgtgg
ctgaagcgagacacgctgcccgatgagagtgttgtgcccaagggggacgcacccgctggc
acccggcaacagctcttctgcagacaggcccctaacccgcccttggagggagcctctgcc
tcctctgccttctttgatgagctggtccctcagagtctgactccctgggagatccccgtc
acagaagacgcggatgggctcctgtgccgggcaatactgcttggacagctggaagccgcc
gtgaaactgtgtctgaaggaagagcgctttgccgatgccatcctgctggcccaggctggg
agcacggacctgctgaagcgaacccaggagcactacttggccaagaggagaacaagagtc
tcctcgcttctggcctgcgtcgtgcagaaaaactggaagtccctggtgtgtgcctgtagc
ctgaaaaactggagggaggcgctggccatgctgctgacctactcagcgccggaggaactc
ccggggctctgcgacatgctgggcatgcgcctggagcaggagggcagcggggccttggcg
gccgacgccaggctctgttacgtgtgctcagggagcgtggagcggctggtggagtgctgg
gccaagggtgacccggcgccatcccccatgactctccaggacctgatggagaaggtgatg
gtcctccagaggagcctgcagctactgcgggggcccgagggggggagcctgggccctgcc
acgatttccagcatcacacagtatgccaacttcctggcagcccaaggcagcctggctgct
gccctgagctacctacccagagacagtgctcagccaccaatccagcagctgagagatcga
ctgtttcatgcccagggttctagcgtcttgggccaacaggctccccctttccccttcccc
cgagtttttgtgggggctcccccccgccctaaagatactgcatcctacagaccaggcttc
cagccttctcatcaggttccagctccacctcctcatccaaggatctttacacctcagtca
ccactagtgatgcctttcacaccttcgggtcccaacccttatcagggtcccagaatgcag
aatataaatgactacagaccccccatgcctgagaccccacagtctttgcccctgggccct
ggggtaagttctgctatccctcagccgccgctcatgggacaagaggcccaggctcctcac
ccagggggagtcaccggcaggtggcctctgtcagcagcacccccagccatcctgcagccg
ggccctgcctccctgccggacactcccattctgttcccgccgcttcccgtgaggccactg
ggtcccagcccagacagcccccagcccgggcttcatcccccgggaggccccgctgtcccc
agcttcagcgtcctccccactgcgggcatcgcagctcctctaccaggatctcaagattcc
ctgaaaaatgccccagctcccaagggaagcctttggaggaagcagttgccagagacattt
gtgcccccagcacctatcactgctcctgttcagagccttccccccgagccccgggggagc
ctctcctcacagcgccccatccctgttgggggtcacgctcccccaggcgcgcccagagaa
cgcagcctgcagccacaggcacccaagaagacggagaagaaggagctgcccacagagcac
cagcctttgaagaccagcttcgagacgcttctgcagcgctgctctgcgtgtgccacagac
ttgaaaacaaagcggaagctggaggaggccgcccaccggctggaagggctctatgagaag
ctctgtgaggggacgctctcccctcaggtcctggccgggctccacgaggtggcccgctgt
gtggacaccggaagcttcgagcagggcctcgccgtgcacgcacaggtggtgggctgcagc
accttcagcgaggtgtcgggcttcatgcccatcctgaaggccgtcctcaccatcgcacac
aagctgcacctctga
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