KEGG   Sorex fumeus (smoky shrew): 130029857
Entry
130029857         CDS       T10594                                 
Name
(RefSeq) elongin-C-like
  KO
K03872  elongin-C
Organism
sfum  Sorex fumeus (smoky shrew)
Pathway
sfum04066  HIF-1 signaling pathway
sfum04120  Ubiquitin mediated proteolysis
sfum05170  Human immunodeficiency virus 1 infection
sfum05200  Pathways in cancer
sfum05211  Renal cell carcinoma
Brite
KEGG Orthology (KO) [BR:sfum00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    130029857
 09130 Environmental Information Processing
  09132 Signal transduction
   04066 HIF-1 signaling pathway
    130029857
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    130029857
  09162 Cancer: specific types
   05211 Renal cell carcinoma
    130029857
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    130029857
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sfum04121]
    130029857
   03400 DNA repair and recombination proteins [BR:sfum03400]
    130029857
Ubiquitin system [BR:sfum04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul2 complex
    Adoptor protein
     130029857
   Cul5 complex
     130029857
DNA repair and recombination proteins [BR:sfum03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     130029857
SSDB
Motif
Pfam: Skp1_POZ
Other DBs
NCBI-GeneID: 130029857
NCBI-ProteinID: XP_055976913
LinkDB
Position
Unknown
AA seq 112 aa
MDGEEKTYGGCEGPDAMYVKLISSDGHKFIVKREHALTSGTIKAMLSGPGQFAENETNEV
NFTEIPSHVLSKVCVYITYKVRYTNSSTEIPELPIAPEIALGLLMAANFLDC
NT seq 339 nt   +upstreamnt  +downstreamnt
atggatggagaagagaaaacctatggtggttgtgaaggtcctgatgctatgtatgtcaaa
ttaatatcctctgatggtcataagtttattgtaaaaagagaacatgcattaacatcagga
acaataaaagccatgttgagtggcccaggtcagtttgctgaaaatgaaaccaatgaagtc
aattttacagagatcccttcacatgtgctatccaaagtgtgcgtgtatatcacatacaag
gttcgttatactaacagctccaccgagattcctgaattgccaattgcacctgaaattgca
ctgggactgctgatggctgcgaatttcctagattgttaa

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