Sorex fumeus (smoky shrew): 130030024
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Entry
130030024 CDS
T10594
Symbol
CPNE1
Name
(RefSeq) copine-1 isoform X1
KO
K24526
RNA-binding protein 12
Organism
sfum Sorex fumeus (smoky shrew)
Brite
Spliceosome [BR:
sfum03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
130030024 (CPNE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
130030024
NCBI-ProteinID:
XP_055977055
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Position
Unknown
AA seq
1011 aa
AA seq
DB search
MAVVIRLQGLPIVAGTMDIRHFFSGLTIPDGGVHIVGGELGEAFIVFATDEDARLGMMRT
GGTIKGSKVTLLLSSKTEMQNMIELSRRRFETANLDIPPANSSRSGPPPSSGMSGRVNLP
TTVPNFNNPSPTVVTAATSVHESNKNIQTFSTASIGTAPPNMGASFGSPTFSSTIPSTAS
PMNTVPPPPIPPIPAMPSMPPMPSIPPIPVPPPVPTLPPVPPVPPMPPVPSVPPMTPLPP
MSGMPPLNPPPVAPLPAGMNGSGAPMNLNNNLNPVFLGPLNPVNPIQMNSQSGVKPLPIN
PDDLYVSVHGMPFSAMENDVRDFFHGLRVDAVHLLKDHVGRNNGNGLVKFLSPQDTFEAL
KRNRMLMIQRYVEVSPATERQWVAAGGHITFKQSMGPSGQTHPPPQTVPRSKSPSGQKRS
RSRSPHEAGFCVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRN
EADYKAALCRHKQYMGSRFIQVHPITKKGMLEKIDMIRKRLQNFSYDQREMMLNPEGDVS
SAKVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARK
SERLHRKKLNGREAFVHVVTLEDMREIEKNPPAQGKKGLKMPVPGNPAVPGVPNAGVPGA
GVPGAGVPGSGVPGAGVPGAGVPGAGVPGSGVPGAGVPGAGVPGAGVPGAGMPGAGMPGA
GMPGAGVPGSVMPGAAMPGAALPGAVMPGAAMSGAGIPGAGMPGPGMPGPGMPGVGIPGA
GIPGAGGEEHAFLTVGSKEANNGPPFNFPGNFGGSNAFGPPLPPPGLGGAFGDVRPGMPS
VGNSGLPGLGLDVPGFGGGPNSISGPGFGGGPQNFGNGPGGLGGPPGFGSGPPGLGSAPG
HLSGPPAFGPGPGPGPIHIGGPPGFGSSSGKPGPTVIKVQNMPFTVSIDEILDFFYGYQV
IPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVFDLNDRPIGSRKVKLVLG
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atggctgtggtcatccgcttgcaaggtctcccaattgtggcggggaccatggacattcgc
cacttcttctctggattgaccatccctgatgggggcgtgcatattgtagggggtgaactg
ggtgaggctttcatcgtttttgccactgatgaagatgcaaggcttggtatgatgcgcaca
ggtggtacaattaaagggtcaaaagtaacactgttgttgagtagtaaaacggaaatgcag
aatatgattgaactgagtcgtaggcggtttgaaactgccaacttagatataccaccagca
aattctagtagatcaggaccgcctcctagctcaggaatgagtggcagggtaaacttacct
acaacagtgcccaactttaataatccttcacccactgtagttactgctgctacttctgtt
catgaaagcaacaaaaatatacagacattttccacagccagcataggaacggctcctcca
aatatgggggcctcctttgggagcccaacgtttagctcaactataccaagcacagcctct
ccaatgaacacagtcccaccaccaccaattcctccaatcccagcgatgccatctatgcca
ccaatgccgtctattcccccaataccagttcctcctccagtacctacattgcctcctgtg
cctcctgtgcccccaatgcccccagtaccttctgtgccacccatgaccccattgccaccc
atgtcaggtatgccacccttgaaccctccacctgtggcaccgctacctgctggaatgaat
ggctctggagcacctatgaatctgaacaataacttgaaccctgtgtttctgggtccattg
aatcctgttaaccctatccagatgaactctcaaagcggagtgaaaccacttcccatcaat
cctgatgatctttatgttagtgtacatggaatgcccttttctgcaatggaaaatgatgtc
agagatttttttcatgggctccgtgttgatgcagtgcacttgttgaaagatcatgtgggt
cgaaataatgggaatggattggttaagttcctctcccctcaagatacctttgaagctttg
aaaagaaacagaatgctgatgattcaacgttatgtggaagttagccctgccacagagaga
cagtgggtagctgctggaggccatatcacttttaagcaaagtatgggaccttctggacaa
acccatccccctcctcagacagttcccagatcaaaatcgcccagtgggcagaaaagatca
aggtcaagatcaccacatgaggctggtttttgtgtttatttgaaagggctgccatttgaa
gcagaaaacaaacatgtcattgatttttttaagaagttggatattgtggaagatagtatt
tatattgcttatggacccaatgggaaagcaactggtgaaggcttcgtagagttcaggaat
gaggctgactataaggctgctctatgtcgacataaacaatatatgggcagtcgttttatt
caagttcatccaataactaagaagggcatgctagaaaagatagatatgattcgaaaaaga
ctgcagaacttcagctatgaccagagggaaatgatgttgaatccagagggtgatgtcagc
tctgccaaagtctgtgcccacattacaaatattccattcagcattaccaagatggatgtt
cttcagttcctagaaggaattcctgtggatgaaaatgctgttcatgttcttgttgataac
aatgggcaaggtctaggacaggcattggttcagtttaaaaatgaagatgatgcacgtaag
tctgaacgcttacaccgtaaaaaacttaatgggagagaagcttttgttcatgtagttact
ctagaagatatgagagagattgagaaaaatccccctgctcaaggcaaaaaggggttaaag
atgcctgtgccaggtaatcctgcagttccaggagtgcccaatgcaggagtgcccggtgca
ggagtgcccggtgcaggagtgcctggttctggagtgcccggtgcaggagtgcccggtgca
ggagtgcccggtgcaggagtgcccggttctggagtgcccggggctggagtgcccggtgct
ggagtgcccggtgctggagtgcctggggcaggaatgcccggtgctggaatgcctggcgcc
ggaatgcccggcgctggagtgccgggctctgtgatgccgggcgctgccatgcccggcgct
gccttgcctggcgctgtgatgcctggtgctgcaatgtctggtgctgggatccctggtgct
gggatgcctggcccggggatgcccggcccagggatgcctggtgtggggatacctggtgca
gggattcctggtgcaggaggtgaagagcatgccttcctgaccgtaggatctaaggaagcc
aataatgggcctccatttaactttcctggtaattttggtgggtcaaatgcctttggacca
ccactccctcctccaggattaggaggagcctttggtgatgttaggcctggtatgccttca
gttggaaatagtggtttgccgggtttaggactggatgttccaggttttggtggtggacca
aatagtataagtgggccaggatttggagggggccctcagaattttggaaatggtcctggt
ggcttaggtggccctcctggctttggaagtggccctcctggtcttgggagtgcccctggg
catttgagtggaccaccagcttttgggcctgggcctggccctgggccaatccatattggt
ggtccccctggctttggatctagttctggaaaaccaggaccaacagtaattaaagtgcag
aatatgcccttcactgtgtctattgatgagatcctagatttcttttatggctatcaagtg
attccaggctcagtatgtttaaaatacaatgaaaaaggtatgcccacaggtgaagccatg
gtggccttcgaatctcgtgatgaagccacggctgctgtctttgatttaaatgacagacct
attggctcaaggaaagtaaaacttgtattagggtag
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