Sorex fumeus (smoky shrew): 130030025
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Entry
130030025 CDS
T10594
Symbol
RBM39
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
sfum Sorex fumeus (smoky shrew)
Brite
Spliceosome [BR:
sfum03041
]
Common components
Common spliceosomal components
General mRNP proteins
130030025 (RBM39)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RBD_DEAH11
RRM_7
POP1_C
IHO1
Motif
Other DBs
NCBI-GeneID:
130030025
NCBI-ProteinID:
XP_055977067
LinkDB
All DBs
Position
Unknown
AA seq
530 aa
AA seq
DB search
MADDIDIEAMLEAPYKKDENKLSSANGHEERSKKRKKSKSRSRSHERKRSKSKERKRSRD
RERKKSKSRERKRSRSKERRRSRSRSRDRRFRGRYRSPYSGPKFNSAIRGKIGLPHSIKL
SRRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVR
DVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMAN
NLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSD
SECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGRLQLM
ARLAEGTGLQIPPAAQQALQMSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAASVQP
LATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPS
IAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPSRR
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgatattgatattgaagcaatgcttgaggctccttacaagaaggatgagaac
aagttgagcagtgctaacggccatgaagaacgtagcaaaaagaggaaaaaaagcaagagc
agaagtcgtagtcatgaaagaaaaagaagcaaaagtaaggaacggaaacgaagtcgagat
agagaacggaaaaagagtaaaagtcgtgaaaggaagagaagtagaagcaaagaaagaaga
cgaagtcgttcaagaagtcgagaccgcagattcagaggccgctacagaagtccttactcc
ggaccaaaatttaacagtgccatccgaggaaagattgggttgcctcatagcatcaaatta
agcagacgacgttctcgaagcaaaagtccattcagaaaagacaagagccctgtgagggaa
ccaattgataatctaactcctgaggaaagagatgcaaggacagttttctgcatgcagttg
gcggctagaattcggccacgggatttggaagagtttttctctacagtaggaaaggttcga
gatgtgaggatgatttccgacagaaattcaagacgttctaaaggaattgcttatgtggaa
tttgttgacgttagctctgttcctctagctataggattaactggccaacgtgttttggga
gtgcccatcatagtacaggcatcccaggccgaaaaaaacagagctgcagcaatggcaaac
aatctacaaaagggaagtgctggacctatgaggctttatgtaggctccttacattttaac
ataacagaggatatgcttcggggaatctttgagccttttggaaggattgaaagtatccag
ctcatgatggatagtgaaacaggacgatccaaggggtatggatttatcacgttttctgac
tcagaatgtgccaagaaggctttggaacaacttaatggatttgagttagcaggaaggcca
atgaaagttggtcatgttactgaacgaactgatgcttccagtgctagctcatttttggac
agtgatgaactggaaaggactggaattgatttgggaacaacgggtcgcctccaattaatg
gcaaggcttgcagagggtacaggtttgcaaattccaccagcagcacagcaagctctacaa
atgagtggctctttggcatttggtgctgtggcagaattctcttttgttatagatttgcaa
acaagactttctcagcagacggaagcttcagctttagctgcggctgcttctgttcaacca
cttgcaacacaatgcttccaactctctaacatgtttaaccctcaaacagaagaagaagtc
ggatgggataccgagattaaagatgatgtgattgaagaatgtaataaacatggcggagtt
attcatatttatgttgataaaaattcagctcagggcaatgtgtatgtgaagtgcccatcc
attgctgcagccattgctgcagtaaacgcattgcatggcaggtggtttgctggaaaaatg
ataacagcagcgtatgtacctcttccaacatatcacaacctcttccctgattctatgaca
gcaacacaactactggttccaagtagacgatga
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