Sorex fumeus (smoky shrew): 130030062
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Entry
130030062 CDS
T10594
Symbol
SOX2
Name
(RefSeq) transcription factor SOX-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04390
Hippo signaling pathway
sfum04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04390 Hippo signaling pathway
130030062 (SOX2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
130030062 (SOX2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfum03000
]
130030062 (SOX2)
Transcription factors [BR:
sfum03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
130030062 (SOX2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
130030062
NCBI-ProteinID:
XP_055977173
LinkDB
All DBs
Position
Unknown
AA seq
330 aa
AA seq
DB search
MYNMMETELKPPGPPQTSGGGGGGGGGGGGGNPGAAAAAAAAGGNPKNSPDRVKRPMNAF
MVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSETEKRPFIDEAKRLRALHMKEHPDY
KYRPRRKTKTLLKKDKYTLPGGLLAPGGNGMASGVGVGAGLGAGVNQRMDSYAHMNGWSN
GSYSMMQDQLGYAQHPGLNAHGAAQMQPMHRYDVSALQYNSMSSSQTYMNGSPTYSSMSY
SQQGTPGMALGSMGSVVKSEASSSPPVVTSSSHSRAPCQAGDLRDMISMYLPGAEVPEPA
APSRLHMAQHYQSGPVPGTAINGTLPLSHM
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgtacaacatgatggagacggagctgaagcccccgggcccgccgcagacttcggggggc
ggcggcggcggcggcggcggtggcggcggcggcaaccccggggcggcggcggcggcggcg
gcggcgggcggcaaccccaagaacagccccgaccgcgtgaagcggcccatgaacgccttc
atggtgtggtcccgcgggcagcggcgcaagatggcccaggagaaccccaagatgcacaac
tcggagatcagcaagcgcctgggcgccgagtggaagctgctgtccgagacggagaagcgg
ccgttcatcgacgaggccaagcggctgcgcgcgctgcacatgaaggagcacccggattac
aagtaccggccgcggcggaaaaccaagacgctgctcaagaaggacaagtacacgctgccc
ggcgggctgctggcgcccggcggcaacggcatggccagcggcgtcggggtgggcgccggg
ctgggcgcgggcgtcaaccagcgcatggacagctacgcgcacatgaacggctggagcaac
ggcagctacagcatgatgcaggaccagctgggctacgcgcagcacccgggcctcaacgcg
cacggcgcggcgcagatgcagcccatgcaccgctacgacgtgagcgcgctgcagtacaac
tccatgagcagctcgcagacctacatgaacggctcgcccacctacagcagcatgtcctac
tcgcagcagggcacgcccggcatggcgctgggctccatgggctcggtggtcaagtccgag
gccagctccagcccgcccgtggtcacgtcctcctcgcactccagggcgccctgccaggcc
ggggacctgcgggacatgatcagcatgtacctcccgggcgccgaggtgcccgagcccgcc
gcgcccagcagactgcacatggcccagcactaccagagcggcccagtgcccggcacggcc
atcaacggcacactgccgctgtcgcacatgtga
DBGET
integrated database retrieval system