KEGG   Sorex fumeus (smoky shrew): 130030062
Entry
130030062         CDS       T10594                                 
Symbol
SOX2
Name
(RefSeq) transcription factor SOX-2
  KO
K16796  transcription factor SOX2 (SOX group B)
Organism
sfum  Sorex fumeus (smoky shrew)
Pathway
sfum04390  Hippo signaling pathway
sfum04550  Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:sfum00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04390 Hippo signaling pathway
    130030062 (SOX2)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04550 Signaling pathways regulating pluripotency of stem cells
    130030062 (SOX2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:sfum03000]
    130030062 (SOX2)
Transcription factors [BR:sfum03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    130030062 (SOX2)
SSDB
Motif
Pfam: SOXp HMG_box HMG_box_2 HMG_WDHD1
Other DBs
NCBI-GeneID: 130030062
NCBI-ProteinID: XP_055977173
LinkDB
Position
Unknown
AA seq 330 aa
MYNMMETELKPPGPPQTSGGGGGGGGGGGGGNPGAAAAAAAAGGNPKNSPDRVKRPMNAF
MVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSETEKRPFIDEAKRLRALHMKEHPDY
KYRPRRKTKTLLKKDKYTLPGGLLAPGGNGMASGVGVGAGLGAGVNQRMDSYAHMNGWSN
GSYSMMQDQLGYAQHPGLNAHGAAQMQPMHRYDVSALQYNSMSSSQTYMNGSPTYSSMSY
SQQGTPGMALGSMGSVVKSEASSSPPVVTSSSHSRAPCQAGDLRDMISMYLPGAEVPEPA
APSRLHMAQHYQSGPVPGTAINGTLPLSHM
NT seq 993 nt   +upstreamnt  +downstreamnt
atgtacaacatgatggagacggagctgaagcccccgggcccgccgcagacttcggggggc
ggcggcggcggcggcggcggtggcggcggcggcaaccccggggcggcggcggcggcggcg
gcggcgggcggcaaccccaagaacagccccgaccgcgtgaagcggcccatgaacgccttc
atggtgtggtcccgcgggcagcggcgcaagatggcccaggagaaccccaagatgcacaac
tcggagatcagcaagcgcctgggcgccgagtggaagctgctgtccgagacggagaagcgg
ccgttcatcgacgaggccaagcggctgcgcgcgctgcacatgaaggagcacccggattac
aagtaccggccgcggcggaaaaccaagacgctgctcaagaaggacaagtacacgctgccc
ggcgggctgctggcgcccggcggcaacggcatggccagcggcgtcggggtgggcgccggg
ctgggcgcgggcgtcaaccagcgcatggacagctacgcgcacatgaacggctggagcaac
ggcagctacagcatgatgcaggaccagctgggctacgcgcagcacccgggcctcaacgcg
cacggcgcggcgcagatgcagcccatgcaccgctacgacgtgagcgcgctgcagtacaac
tccatgagcagctcgcagacctacatgaacggctcgcccacctacagcagcatgtcctac
tcgcagcagggcacgcccggcatggcgctgggctccatgggctcggtggtcaagtccgag
gccagctccagcccgcccgtggtcacgtcctcctcgcactccagggcgccctgccaggcc
ggggacctgcgggacatgatcagcatgtacctcccgggcgccgaggtgcccgagcccgcc
gcgcccagcagactgcacatggcccagcactaccagagcggcccagtgcccggcacggcc
atcaacggcacactgccgctgtcgcacatgtga

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