Sorex fumeus (smoky shrew): 130030113
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Entry
130030113 CDS
T10594
Symbol
SAMHD1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1 isoform X1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum03250
Viral life cycle - HIV-1
sfum04623
Cytosolic DNA-sensing pathway
sfum05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
130030113 (SAMHD1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
130030113 (SAMHD1)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
130030113 (SAMHD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfum03400
]
130030113 (SAMHD1)
DNA repair and recombination proteins [BR:
sfum03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
130030113 (SAMHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HD
HD_assoc_2
PDEase_I
Motif
Other DBs
NCBI-GeneID:
130030113
NCBI-ProteinID:
XP_055977277
LinkDB
All DBs
Position
Unknown
AA seq
477 aa
AA seq
DB search
MKVINDPVHGHIELHPLLIRIIDTPQFQRLRYIKQLGAGYYVFPGASHNRFEHSLGVGYL
AGCLLRELHEKQPELKISPRDILCVQIAGLCHDLGHGPFSHMFDGRFIPLARPDVKWTHE
QGSVQMFEHLIKSNGLKDVMQHYGLVPEEDICFIKEQIIGPPDSPTDSCSWPYKGRPKEK
GFLYEIVANKRNGIDVDKWDYFARDCHHLGIKNSFDYQRFIRFARVCEVEDGKHICTREK
EVGNLYDMFHTRNILHRRAYQHKVSNIIDRMITDALLKADSFIKITGTEGKTYHISTAID
DMEAFTKLTDNVYQQILYSNDPNLEAAQKILKKIECRELYKYVGETQPMKQIRIQKEEFN
HLPKEVADAKPEGVFPEAEQEPELKDEDFIVDVISMDYGMQDRNPIDLVDFYCKSDINKA
IKISRNQVSQLLPERFAEQLIRVYCKKMDEKSLHKARQHFVQWCLLRNFTKPQFFSP
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtaattaatgaccctgtccatggccacattgaacttcatcctctcctcatccga
atcattgacactcctcagtttcagcggcttcggtatattaaacagttgggagccggttac
tatgttttcccaggagcttcacacaatcgatttgaacatagtctaggtgtaggatatctt
gcaggttgtctacttcgtgagctgcatgaaaagcagccagagctgaagataagtcctcga
gatatactctgtgttcagattgctgggctttgtcatgatcttggtcatggtccattttct
catatgtttgatggaagatttattccacttgctcgcccagatgtgaagtggacgcatgaa
caaggctcagttcagatgtttgagcacttaataaagtctaatggactcaaagatgtcatg
caacactatggacttgttcctgaagaagatatttgctttatcaaggaacagattatagga
ccacctgattcaccaacggattcatgttcttggccatacaaagggcgtcctaaagagaaa
ggcttcctatatgaaatagtggctaataaaagaaatggcattgatgtggacaaatgggat
tattttgctagggactgccatcatcttggaataaaaaatagttttgattatcaacgtttt
attaggtttgcccgtgtctgtgaagtagaggatggaaagcatatttgtacaagagaaaag
gaggttgggaatctttatgatatgttccacacacgcaacatcttgcatcgtagagcttat
cagcataaagtcagtaacatcattgatagaatgattacagatgctttgctcaaagcagac
tccttcataaagattacaggcactgaaggaaaaacgtaccacatttctacagcaattgat
gacatggaagccttcacaaaattaacagataatgtttatcaacagattctgtactctaat
gatcccaatttggaggcagcacaaaagattttaaaaaaaattgaatgccgtgaactgtac
aagtatgtgggtgagactcagccaatgaaacaaataaggattcaaaaggaagaatttaat
caccttccaaaagaggttgccgatgctaaacctgagggagtatttccagaagctgaacag
gaacctgaactgaaagatgaagatttcatagtggatgttatcagcatggattatggaatg
caagacaggaatccaattgatcttgttgacttctattgtaagagtgacatcaataaagca
atcaagatttcgagaaatcaggtctcacagcttttaccagagagatttgcagaacagctg
attcgagtatactgcaaaaagatggatgaaaaaagtttacataaagcacggcaacatttt
gttcagtggtgcttattgagaaatttcactaaaccacagtttttctctccatga
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