Sorex fumeus (smoky shrew): 130030205
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Entry
130030205 CDS
T10594
Symbol
TOP1
Name
(RefSeq) DNA topoisomerase 1
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sfum Sorex fumeus (smoky shrew)
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sfum03032
]
130030205 (TOP1)
Enzymes [BR:
sfum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
130030205 (TOP1)
DNA replication proteins [BR:
sfum03032
]
Eukaryotic type
DNA Topoisomerases
130030205 (TOP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
Motif
Other DBs
NCBI-GeneID:
130030205
NCBI-ProteinID:
XP_055977409
LinkDB
All DBs
Position
Unknown
AA seq
771 aa
AA seq
DB search
MSGDHLHNDSQIEADFRLNDSHKHKDKHKDREHRHKEHKKDKEKDREKSKHSNSEHKDSE
KKHKEKEKTKHKDGSSEKHKDKHKDRDKEKRKEEKIRASGDAKIKKEKENGFSSPPRIKD
EPEDDNYFVPPKEDIKPLKRPRDEDDADYKPKKIKTEDIKKEKKRKLEEEEDVKLKKPKN
KDKDKDKDKKVPEPDSKKKKPKKEEEQKWKWWEEERYPEGIKWKFLEHKGPVFAPPYEPL
PESVKFYYDGKVMKLSPKAEEVATFFAKMLDHEYTTKEIFRKNFFKDWRKEMTNEEKNII
TNLSKCDFNQMSQYFKAQSEARKQMSKEEKQKIKEENEKLLKEYGFCIMDNHRERIANFK
IEPPGLFRGRGNHPKMGMLKRRIMPEDIIINCSKDAKVPSPPPGHKWKEVRHDNKVTWLV
SWTENIQGSIKYIMLNPSSRIKGEKDWQKYETARRLKKCVDKIRNQYREDWKSKEMKVRQ
RAVALYFIDKLALRAGNEKEEGETADTVGCCSLRVEHINLHPELDGQEYVVEFDFLGKDS
IRYYNKVPVEKRVFKNLQLFMENKQPEDDLFDRLNTGILNKHLQDLMEGLTAKVFRTYNA
SITLQQQLKELTAPDENIPAKILSYNRANRAVAILCNHQRAPPKTFEKSMMNLQSKIDAK
KEQLADARRDLKSAKADAKVMKDAKTKKVVESKKKAVQRLEEQLMKLEVQATDREENKQI
ALGTSKLNYLDPRISVAWCKKWGIPIEKIYNKTQREKFAWAIDMADEDYEF
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgagtggggaccatctccacaacgattcccagatcgaggcggatttccgattgaatgat
tctcataaacacaaagataaacacaaagatcgagaacatcggcacaaagagcacaaaaag
gacaaagaaaaggaccgagaaaaatccaagcatagcaacagtgaacataaagattctgaa
aagaaacacaaagaaaaggagaaaaccaaacacaaagacggaagttcagaaaagcataag
gacaaacacaaagacagagataaggaaaaacgaaaggaggaaaagattagagcctctggg
gatgcaaaaataaagaaggagaaggagaatggcttttctagtccaccacgaattaaagat
gaacctgaggacgataactattttgttcctcccaaagaggatataaagccattaaagaga
ccacgagatgaggatgatgctgattataaacctaagaaaattaaaacagaagatatcaag
aaggaaaagaaacggaaattagaggaagaagaggacgttaagttgaaaaaacccaagaat
aaagataaagataaagataaagataaaaaagttcctgagccagatagcaagaaaaagaag
ccgaagaaagaagaggagcagaaatggaaatggtgggaggaggagcgctatcctgaaggc
atcaagtggaaattcctagagcataaaggtcctgtttttgctccaccatatgagcctctt
ccagagagtgtcaagttttactatgatggtaaagtcatgaagctgagccccaaagcagaa
gaagtagctacgttctttgcaaaaatgctcgaccatgaatatactactaaggaaatattt
agaaaaaatttctttaaagactggagaaaggaaatgactaatgaagagaagaatattatc
accaacttaagcaaatgtgattttaaccagatgagccaatatttcaaagctcagtctgag
gctcggaagcagatgagcaaggaagaaaaacagaaaatcaaagaggagaatgaaaaatta
ctgaaagaatatggcttctgtattatggataatcacagagagaggattgccaacttcaag
atagaacctcctgggcttttccgtggtcgtggcaaccatccgaagatgggcatgctgaag
agacgaattatgcctgaagatataatcatcaactgtagcaaagatgccaaggttccttct
cctcctccaggacataaatggaaagaggttcgacatgataacaaggttacttggctggtc
tcctggacagagaatatccaaggttccattaaatacatcatgctgaaccccagctctcga
atcaagggtgagaaagattggcagaaatatgagactgctcgtcggctgaagaagtgtgtg
gacaaaatccggaaccagtatcgagaagactggaagtccaaagagatgaaagtccggcag
agagctgtagccttatactttattgacaagctggctctgagagcaggtaatgagaaggag
gaaggagaaacagcggacactgtgggttgctgctcacttcgtgtagaacacatcaatctg
cacccagagttggatggtcaggaatatgtggtagaatttgacttccttgggaaggactca
atcagatactataacaaggtccctgttgagaaaagagtttttaaaaacttacaactattt
atggagaacaaacagcctgaggatgatctttttgatagactcaatactggtattttaaat
aagcatcttcaagatctcatggaaggcttaacagccaaggtgttccgtacatacaatgcc
tccatcacgctacagcagcagcttaaagaacttacagctccggatgagaacatcccagca
aagattctttcttacaaccgagccaatcgagctgttgcaattctctgtaaccatcagagg
gcaccacctaaaacttttgagaagtccatgatgaatttacaatctaagattgatgctaaa
aaggaacagctcgcagatgcccggagagatctgaagagtgctaaggctgatgccaaggtc
atgaaggatgcaaagactaagaaggtggtagaatcaaagaagaaagctgtgcagagattg
gaggaacagttaatgaagcttgaagttcaggccacagaccgagaagaaaataaacagatt
gccttggggacctccaaactcaattatctggaccctaggatctcagtggcttggtgcaag
aagtggggaattccaattgagaaaatttacaacaaaacccagcgggagaagtttgcctgg
gctattgacatggccgatgaggactacgagttctag
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