Sorex fumeus (smoky shrew): 130030326
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Entry
130030326 CDS
T10594
Symbol
TMC2
Name
(RefSeq) transmembrane channel-like protein 2
KO
K21988
transmembrane channel-like protein
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
130030326 (TMC2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sfum02000
]
130030326 (TMC2)
03037 Cilium and associated proteins [BR:
sfum03037
]
130030326 (TMC2)
Transporters [BR:
sfum02000
]
Other transporters
Pores ion channels [TC:
1
]
130030326 (TMC2)
Cilium and associated proteins [BR:
sfum03037
]
Other cilia and associated proteins
Stereociliary proteins
130030326 (TMC2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
TRAP_beta
Motif
Other DBs
NCBI-GeneID:
130030326
NCBI-ProteinID:
XP_055977547
LinkDB
All DBs
Position
Unknown
AA seq
888 aa
AA seq
DB search
MVAVLMAPIPAGFASSAAYTPARYPVPAAAAGSSAAGNKGSMGSTSGDRSRRESSRKRTS
KAQDASGRREAQRGLKEKAGDSPRPGSPRRKSTGHGQQKAAERTPQGRRKRDGRASIREQ
RASSKKEREVPRHQEEMWKPSRKHRSSSLASGASAGDSLTEEELAQILEQVEDKKKLIAT
MRNKPWPMARKLRELREAQEFVEKYEGALGRGKGKRLYAYKMLMAKKWIKFKRDFDNFKT
QCIPWEMKIKDIESHFGSSVASYFIFLRWMYGVNLVLFGLIFGLVIIPEVLMGVPYGSIP
RKTVPRAEEEKAMDFSVLWDFEGYIKYSALFYGYYNNQRTIGWLRYRLPMAYFMVGVSVF
GYSLTIVIRSMASNTQGTTSEGESDNFTFSFKMFTSWDYLIGNSETADNKYASITTSFKE
SIVDEQESNKEENVHLTRFLRVLANFLIICCLCGSGYLIYFVVKRSQEFSKMQNVSWYER
NEVEIVMSLLGMFCPPLFETIAILENYHPRVGLKWQLGRIFALFLGNLYTFLLALMDDVH
LKLSQEETIRNITHWTLFNYYNSTGWNESIPRPPLHPADVPRGSCWETAVGIEFMRLTVS
DMLVTYITILLGDFLRACFVRFMNYCWCWDLEAGFPSYAEFDISGNVLGLIFNQGMIWMG
SFYAPGLVAVNVLRLLTSMYFQCWAVMSSNVPHERVFKASRSNNFYMGLLLLVLFLSLLP
VAYTIMSLPPSFDCGPFSGKNRMYEVIQETIENDFPTFLGKIFAFLANPGLIIPAILLMF
LAIYYLNSVSKSLSRANALLRKKIQALREVEKSHKSVKGRTPGQDSKDVSKGSSEIATQL
PATKEGTTSVLETVLNVAFSTASGERDSRRAAPPFRSVTAKAEGVGGE
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atggtggcggttctgatggctccgattcccgccggattcgcctcctccgcggcctacacg
cccgcccgctacccggttcccgccgccgccgccggaagttcggccgccggcaacaagggg
tcgatgggatctacttccggtgacaggtccagaagggaatcctccaggaagcggacgtcc
aaagcccaggatgcctcaggccggcgagaggcacagcggggcctaaaggagaaagcaggg
gacagcccaaggccggggtctccccggaggaagtcgacgggacatgggcagcagaaagcg
gctgagaggactccccaggggaggaggaagagggatgggagggcctccatccgggagcag
agagcgtcctccaagaaggaaagggaggttccaaggcaccaggaggagatgtggaagcca
tcgaggaagcacaggtcatcctccttggcttctggcgcctctgctggtgactccctcact
gaagaggaactggcccagattctggagcaggtggaagataagaagaagctcattgccacc
atgcggaacaagccctggcccatggcgaggaagcttagggagctcagggaggcccaagaa
tttgtggagaagtatgaaggagccttgggaaggggaaaaggcaaacgactctacgcatac
aagatgctgatggctaagaaatggatcaagtttaagagagattttgataatttcaagact
caatgtattccttgggaaatgaagattaaggatattgagagtcactttggctcttcagtt
gcatcatatttcatctttctccgatggatgtacggagttaacctcgttctttttggttta
atatttggtctagtaataatcccagaggtgctgatgggcgtgccctacgggagtatcccc
aggaagacagtgcctcgggctgaggaagagaaggccatggatttttctgtcctttgggat
tttgagggctacatcaaatattctgctctcttctacggctactacaacaaccagaggacc
atcgggtggctgaggtacaggctgcccatggcttacttcatggtgggggtcagcgtgttc
ggctacagcctgacgatcgtcattcgctcgatggccagcaatacccagggcaccacgagt
gagggagagagtgacaatttcaccttcagcttcaagatgttcaccagttgggactacctg
atcgggaattccgagacggcggataacaaatacgcctccatcaccaccagcttcaaggaa
tcaatagtggatgagcaggagagcaacaaagaagaaaatgtccacctgacgcgattcctc
cgtgtcctggccaacttcctcatcatctgctgtttgtgcggaagtggatacctcatttac
tttgtggtgaagcgatcccaggagttctccaaaatgcagaatgtcagctggtatgaaagg
aacgaggtagaaattgtgatgtccttgctcgggatgttttgtccccctctctttgaaacc
atcgctatcctggagaattaccacccacgagtcggactgaagtggcagctgggtcgcatt
tttgctctcttcctgggaaacctctacacctttctcttggccctcatggatgatgttcac
ctcaagctttctcaagaagagacgataaggaacatcacccactggactctgtttaactac
tacaactccacgggttggaacgagagcatcccccggccacccctgcaccctgcggatgtg
ccccggggctcttgctgggagacagccgtgggcattgaattcatgaggctgacggtgtcg
gacatgctggtcacctacatcaccatcctgctgggggatttcctgcgtgcgtgctttgtg
cggttcatgaactactgctggtgctgggacctagaggccggttttccctcatatgctgag
tttgatattagtggaaatgtgctcgggttgatcttcaaccaaggaatgatctggatgggc
tccttctacgcaccaggactggtggcggtcaacgtgctgcgcctgctgacctccatgtac
ttccagtgctgggcagtgatgagcagcaacgtgccccacgagcgcgtgttcaaggcctcc
cggtccaacaacttctacatgggcctcctgctgctggtgctcttcctcagcctgctgcct
gtggcctacaccatcatgtccctcccgccctccttcgactgcgggcccttcagtgggaaa
aacagaatgtatgaagtcatccaagagaccatcgaaaatgacttccccactttcctgggc
aagatctttgctttcctcgccaacccgggcctcatcatcccagccattttgctgatgttt
ctggccatctactacctgaactcagtgtccaaaagcctctcacgagcgaatgccctgctg
aggaagaaaatccaagcgctccgagaagttgagaagagccacaaatcagtcaaaggcaga
accccaggccaagattccaaggatgtttctaaaggtagctctgaaattgccacccagctc
ccagccacaaaagaaggcacgacttccgtgctggagacggtgctcaacgtggccttttca
acagcctctggggagcgcgattcccgcagggccgcgccgcccttccgatcggtcaccgcg
aaggcggaaggagtgggaggcgagtga
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