Sorex fumeus (smoky shrew): 130030366
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Entry
130030366 CDS
T10594
Symbol
CLDN1
Name
(RefSeq) claudin-1
KO
K06087
claudin
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum03272
Virion - Hepatitis viruses
sfum04382
Cornified envelope formation
sfum04514
Cell adhesion molecule (CAM) interaction
sfum04530
Tight junction
sfum04670
Leukocyte transendothelial migration
sfum05160
Hepatitis C
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
130030366 (CLDN1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
130030366 (CLDN1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
130030366 (CLDN1)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
130030366 (CLDN1)
09158 Development and regeneration
04382 Cornified envelope formation
130030366 (CLDN1)
09160 Human Diseases
09172 Infectious disease: viral
05160 Hepatitis C
130030366 (CLDN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sfum03037
]
130030366 (CLDN1)
04147 Exosome [BR:
sfum04147
]
130030366 (CLDN1)
Cilium and associated proteins [BR:
sfum03037
]
Other cilia and associated proteins
Stereociliary proteins
130030366 (CLDN1)
Exosome [BR:
sfum04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
130030366 (CLDN1)
Exosomal proteins of colorectal cancer cells
130030366 (CLDN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Voltage_CLC
TrbC
Cytochrom_B_C
SUR7
DUF7937
TMEM174
HAAS_TM
DUF2207_C
DUF6479
DUF2975
Motif
Other DBs
NCBI-GeneID:
130030366
NCBI-ProteinID:
XP_055977598
LinkDB
All DBs
Position
Unknown
AA seq
211 aa
AA seq
DB search
MANAGLQLLGFILAFLGWIGAIVSTALPQWKIYSYAGDNIVTAQAIYEGLWMSCVSQSTG
QIQCKVFDSLLNLNSTLQATRALMVIGILLGVIAICVATVGMKCMKCLEDDEVQKMRMAV
VGGVIFLIAGLALLVATAWYGNRIVQEFYDPMTPVNARYEFGQALFTGWAAASLCLLGGA
LLCCSCPRKTTSYPTPRPYPKPTPSSGKDYV
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atggccaacgcggggctgcagctgctgggcttcatcctggccttcctgggctggatcggg
gccatcgtgagcaccgcgctgccccagtggaagatctactcctatgccggcgacaacatc
gtcacggcccaggccatctacgaggggctgtggatgtcctgcgtgtcccagagcaccggg
cagatccagtgcaaagtctttgactccttgctgaacctgaatagtactttgcaagctact
cgtgccttgatggtgattggcatcctcctgggagtaatagccatctgtgtagccactgtt
ggcatgaaatgtatgaaatgtctggaagatgatgaggtacagaagatgcggatggccgtt
gttgggggtgtgatatttcttattgcaggtctggctctgttagttgccacagcatggtat
ggaaatagaattgttcaagaattctatgaccctatgacaccagtcaatgcaaggtatgaa
ttcggtcaggctctattcactggttgggctgctgcttctctctgtcttttgggaggtgcc
ctactttgctgctcctgtcccagaaaaacaacatcttacccaacaccaaggccctatcct
aaacctacaccttcgagtgggaaagactatgtgtga
DBGET
integrated database retrieval system