Sorex fumeus (smoky shrew): 130030448
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Entry
130030448 CDS
T10594
Symbol
SNTA1
Name
(RefSeq) alpha-1-syntrophin
KO
K24063
alpha-syntrophin
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04820
Cytoskeleton in muscle cells
sfum05410
Hypertrophic cardiomyopathy
sfum05412
Arrhythmogenic right ventricular cardiomyopathy
sfum05414
Dilated cardiomyopathy
sfum05416
Viral myocarditis
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
130030448 (SNTA1)
09160 Human Diseases
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
130030448 (SNTA1)
05412 Arrhythmogenic right ventricular cardiomyopathy
130030448 (SNTA1)
05414 Dilated cardiomyopathy
130030448 (SNTA1)
05416 Viral myocarditis
130030448 (SNTA1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Syntrophin_4th
PH_17
PDZ
PH
PDZ_6
PDZ_2
PA14
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
130030448
NCBI-ProteinID:
XP_055977711
LinkDB
All DBs
Position
Unknown
AA seq
501 aa
AA seq
DB search
MASSRRTPRTGLLELRCGTGSGAGAERWQRVLLSLAEDALTVSPADGEPAGPREPEPAQL
NGAAEPGAAPPQLPEALLLQRRRVTVRKADAGGLGISIKGGRENKMPILISKIFKGLAAD
QTEALFVGDAILSVNGEDLSSATHDEAVQVLKKTGKEVVLEVKYMKEVSPYFKNSAGGTS
VGWDSPPASPLQKQPSSPGPPPRDLSEAKHVPLKMAYVSRRCTLTDPEPRYLEICSADGQ
HTLFLRAKDEASAKSWAAAIQAQVNTLMPWVKDELQALLVATSTAGNQAIKQIGWLTEQL
PNGGTAPTLALLTDKELLLYCCLPQTREALSQPARSAPLITTRLVHSGPSKGSVPYDAEL
SFALRTGTRHGVDTHLFSVESPQELAAWTRQLVDGCHRAAEGVQEVSTACTWNGRPCSLS
VHIDKGFTLWAAEPGATRAVLLRQPFEKLQMSSDDGASLLFLDFGGTEGEIQLDLHSCPK
TMVFIIHSFLSAKVTRLGLLA
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccagcaggcgcaccccgcgcacgggactgctggaactgcgctgcgggacgggc
tcgggggccggcgccgagcgctggcagcgggtgctgctcagcctggcggaggacgcgctg
accgtgagccccgccgacggcgagccggccggcccgcgggagccagagcccgcgcagctc
aacggcgccgccgagccgggcgcggcgcccccgcagctgcccgaggcgctgctgctccag
cggcgccgcgtgaccgtgcgcaaggccgacgcgggcggtctgggtattagcatcaaagga
ggccgggagaataagatgcccattctcatctccaagatcttcaagggcctggcagctgac
cagacagaggccctctttgtgggcgatgccatcctctctgtgaatggggaagacctctcc
tctgccacccatgacgaggcggtacaggtgctgaagaagacgggcaaagaagtggtgttg
gaggtcaagtacatgaaagaggtctcaccctatttcaagaactctgctggtggaacgtca
gttggctgggactcacctcctgcctcaccccttcagaagcagccctcctctcctggcccc
ccaccccgggacctcagtgaggccaaacatgtgcccttgaagatggcctatgtctcaagg
aggtgcacccttactgatccagagcccaggtacctggagatctgttccgcagatggccag
cacaccctcttcctgagggccaaggatgaggcgagtgcgaagtcatgggcagctgctatc
caagcccaggtcaacactcttatgccgtgggtcaaggatgagctgcaggcactgctggtg
gccaccagcacagcagggaaccaggccatcaagcagattggctggctgacagagcagctg
cccaacggaggcacagcccccaccctggccctgctgacggataaggagctgctcctgtac
tgctgtctcccccagacccgggaggccctgagccagcccgcccgcagcgcaccactcatc
accaccaggctggtacactcaggcccctccaagggctcggtgccctatgacgcagagctc
tcctttgccctacgcacgggcacgcgccatggcgtggacacccacctgttcagcgtggag
tctccgcaggagctggctgcatggacccgtcaactggtggatggctgtcaccgggctgcc
gagggtgtgcaggaagtgtccacagcctgtacgtggaacggccggccttgcagcctctct
gtgcacatcgataagggcttcacgctgtgggctgctgagccaggcgccactcgagcagtg
ctgctccgccagccgtttgagaaactgcagatgtcctcagacgacggagccagcctcctt
ttcctggactttgggggcactgaaggagagattcagttggacctgcattcatgccccaaa
accatggtcttcatcatacactccttcctctctgccaaagtcacccgcctggggcttttg
gcctag
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