Sorex fumeus (smoky shrew): 130030594
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Entry
130030594 CDS
T10594
Name
(RefSeq) 5-hydroxytryptamine receptor 3C-like
KO
K04819
5-hydroxytryptamine receptor 3
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04082
Neuroactive ligand signaling
sfum04726
Serotonergic synapse
sfum04742
Taste transduction
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
130030594
09150 Organismal Systems
09156 Nervous system
04726 Serotonergic synapse
130030594
09157 Sensory system
04742 Taste transduction
130030594
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sfum04040
]
130030594
Ion channels [BR:
sfum04040
]
Ligand-gated channels
Serotonin (5-HT3)
130030594
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
130030594
NCBI-ProteinID:
XP_055977900
LinkDB
All DBs
Position
Unknown
AA seq
454 aa
AA seq
DB search
MEGACPIRRGLLLGLTVSLLLQERGDTFTINCSGFDQHGVDPAAFQPVFDRKAFRPVLNH
SVPTRVNISFTLSAILEVDAHLQLLTSFLWMNLVWDNAFISWDPKECISISKLSISAENL
WIPDIFIVEAMNIHSAPSGLRAYVNSRGRIKYDTPARVTSICNLDIFYFPFDQQNCSFTF
SSFLYTVDSLLLGMNKKVWEISDTSRNVIQTQGEWELLGISMATQKMSVGSSLYDKIMFY
VAIRRRPGLYIINLLVPSSFLVVIDALSFYLPAENENRAPFKITLLLGYNVFLLMMNDLL
PNSGTPLISVYFSLCLSLMVVSLLETIFITHLLHVATTQPPSMPSWLYSLLLYCTSPWKG
CPTAPQKGSQGLPPSHLPGVKEPMELVGKEARPRGAELNRSPGSAKAQQEDEAHKSYLVD
QWVLFSHLMDTLLFRLYLLFLATSIITILILWNT
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggagggggcgtgccccatcaggaggggactcctcctgggcctcactgtcagcctcctg
cttcaagaacgaggcgacactttcaccatcaattgctcaggctttgaccagcatggagta
gaccctgcagccttccagccagtgttcgacaggaaggcctttcgtcctgtcctcaaccac
agtgtccccaccagggtcaacatctctttcaccctgtctgccatactagaagtggatgca
catctccagctcctgacgtcgtttctgtggatgaacttggtatgggataacgcttttatc
agctgggacccaaaggagtgcatcagcatcagtaaactcagcatatcggccgaaaacctg
tggatccccgacatcttcatcgtcgaagccatgaacatacactccgccccttctggcctc
agggcctacgtcaacagcagaggtcggataaagtacgacacgccagcgcgggtgaccagc
atctgcaacctggacatcttctacttccctttcgaccagcagaactgctccttcaccttc
agctccttcctctacacagtggatagcttgctgctgggcatgaacaagaaggtgtgggag
atctcagacacatctcggaacgtcatccagacccaaggagagtgggagctcctgggcatc
agcatggccacccagaagatgtcggtgggcagcagcctgtatgacaagatcatgttctat
gtggccatcaggcgcagacccggactctacatcatcaaccttctggtgcccagtagcttt
ttggttgtcatcgatgccctcagcttctacctgccggccgagaatgagaaccgggcaccc
ttcaagatcactctcctgctgggctacaatgtcttcctgctcatgatgaatgacttactg
cctaatagtggcacccccctcatcagtgtctacttctccctgtgcctgtccctgatggtg
gtcagcctgctggagaccatcttcattacccacctactgcacgtggccaccacccagccc
ccatccatgccgtcatggctctactctctgctcctctactgcaccagcccctggaaaggc
tgccccactgcaccccagaaggggagccagggtctccctccctctcatctgcctggtgtg
aaggagcctatggaattggtggggaaggaagccaggcccagaggggcagagctgaacagg
agtccagggtcagcgaaagcccaacaagaagatgaggctcacaaaagctatctggtcgac
cagtgggtactgttcagccacctgatggatactcttctcttccgcctctacctgctcttc
ttggccacctccatcataacaatcctcatcctctggaacacctag
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