KEGG   Sorex fumeus (smoky shrew): 130030646
Entry
130030646         CDS       T10594                                 
Symbol
TOPBP1
Name
(RefSeq) DNA topoisomerase 2-binding protein 1 isoform X1
  KO
K10728  topoisomerase (DNA) II binding protein 1
Organism
sfum  Sorex fumeus (smoky shrew)
Pathway
sfum03440  Homologous recombination
Brite
DNA replication proteins [BR:sfum03032]
 Eukaryotic type
  DNA Replication Initiation Factors
   Other initiation factors
    130030646 (TOPBP1)
DNA repair and recombination proteins [BR:sfum03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA1-B complex
     130030646 (TOPBP1)
SSDB
Other DBs
NCBI-GeneID: 130030646
NCBI-ProteinID: XP_055977973
LinkDB
Position
Unknown
AA seq 1525 aa
MSGSDQESEPYLVKFLKSPDNSENFFKALESIKEFQTEEYLQIITEDEALKIKENDRSLY
ICDSFSGIVFDHLRKLGCRIVGPQVVTFCMQHQQCVPRAEHPVHNMVMSDVIISCTSLEK
DKREEVHKYVQMMGGHVFKDLNVSVTHLIAGEVGSKKYLVAANLKKPILLPSWVETLWEK
SQEKKITKYTDINMEDFRCPIFLGCIICVTGLCSADRKAVQQLTVKSGGQYMGHLKMNEC
THLIVQEPKGQKYECAKKWNVHCVTLQWFFDSIEKGFCQDESMYKTESKRETKTMPNTST
PTGQTNTVDSRALSDVSHISNITASCVNESICNSILNSKVEPTVENLENLDISSFQAPED
LLDGCRIYLCGFSGRKLDKLRRLINSGGGVRFNQLNEDVTHVIVGDYDDELKQFWDKSAH
RPLVVGAKWLLECFSKGYLLPEEPYIHASYRPVEVPVSEQPESKTVLLKKNSSFSKKDFS
PNNKPEQADEDLLSQYVNNNSSLDETVKVEREPFNASTHVESGNDSTHISLQEENQSSLT
QGLPGTSTITEEGLFSNKSFLILGFGNEIESNIINIIRENAGKIVSLQSRIIADYAVVPL
LGCQVEATVGEVVTNTWLVTCLDYETLFDPKSDPLFTPVPVMTGKTPLEDCVISFSQCVG
AEKESLAYLANLLGASVQEFFVRKSSAKKGMLASTHLVLKEPNGSKYEASKKWNLPAVSV
AWLLETARTGKKANESLFLIENSPKEEQSVVTEIANGAKLSPKIPEPPVTHLETHSKTAI
KPLDVNQFQSKAFQAVISQHTGQGPVPAAENKPPQEQPTLHLDTPSKFLSKDKLFKPSFD
VKDALAALETPGGPTQRNRKLSTPLSEVIIRNLKLALANSSRNADTLSASPQLKAAQSKQ
EEAVKPLHKVVVCVSKKLSKKQSELNGIAASLGADYRWNFDETVTHFIYQGRPNDTNREY
KSVKERGVHIVSEHWLLECAQEYKHLSESLYPHTYNPKMSLDISTVQDSRLCHSRLPSTD
STSTEDEEPDYLPVEENDTDNVTTNNKESATSDENEKNVPKGALTQTLEMRENFQKQLQE
IMSATSIVKAPGQRASLSRSGCNSTSSTPDSTRSARNGRSRVLEALRHSRQTAPDINTEP
SQNEQIIWDDPTAREERARLASNLQWPSDPTQYSEPQVDVKKLEDFPLPESLQDPEIAKE
AVCNPGSKCTREASNCPSSEEPEALTKDGHLIPTPQAPSIAFPLAKPPVPPHPREKITVM
KETREDLKKKYIFQLSSLNPQERIDYCHLIEKLGGSVIEKQCFDPSCTHIVVGHPLRNEK
YLASVAAGKWVLHRSYLEACRTAGRFVLEEDYEWGSSSIIDVLTGITVQQRRLALAAMRW
RKTIQQKQESGIVEGAFSGWKVILHVDPSREAGFRRLLQSGGAKVLHGHSAPFYKEATHL
FSDYNKMRQDDSGVNIAEAASYNVYCLKTEYIADYIMQETPPQIENYCLPEAVSFLQNNI
EPGSGLSQKRKVPTEKNLIKRPRVY
NT seq 4578 nt   +upstreamnt  +downstreamnt
atgtccggaagtgaccaggaatcagaaccgtaccttgtgaagtttctcaagtctcccgac
aattccgagaacttttttaaagcgcttgagtcaataaaagagttccagacagaagaatat
cttcagatcattacagaagatgaggcactgaagataaaagagaatgatcggtcactttat
atatgtgactcttttagtggtattgtctttgatcacctgagaaagcttggctgcagaatt
gttggtcctcaagtagttacattttgtatgcagcatcagcagtgtgttccaagagctgaa
catccagttcataatatggttatgtctgatgtaattatatcctgcacaagcctcgaaaag
gacaaacgggaagaagttcacaaatatgtgcaaatgatgggtggacatgttttcaaggac
cttaatgtatcagtaactcaccttattgcaggagaagttggtagcaaaaaatatttagtg
gctgcaaacctgaagaaacctattttacttccttcttgggtagagacactttgggagaag
tcacaagagaaaaaaataactaaatatactgatataaacatggaagacttcagatgtcct
atttttcttggttgtataatctgtgtgactggcttatgtagtgcagacaggaaggcagtt
cagcagctcacagtcaagtctggcggtcagtacatgggacacctgaaaatgaatgaatgt
acacacctcattgtgcaagaaccaaaaggccaaaaatatgaatgtgccaagaagtggaat
gtacactgtgtgaccctacagtggttttttgacagtattgaaaaagggttttgccaggat
gaatccatgtacaagacagaatccaaacgagaaacaaagacaatgcctaatacttcaact
cctactggacaaaccaacacagttgatagtcgtgctctttcagatgtcagccacatttcc
aacatcactgcaagttgtgtaaatgagtcgatatgtaattcaattcttaatagcaaagtg
gagcctaccgtggagaatctagaaaatctagatatcagttcatttcaagcacctgaagac
ttgttagatggttgtcggatctatctttgcggttttagtggcagaaagctagataaattg
agaaggcttattaacagcggaggtggagttcgtttcaatcagctcaatgaagatgtaact
catgttattgtgggagattatgatgatgaattgaagcagttttgggataaatcagcccac
aggcctcttgtagtgggagcgaaatggctgctggagtgtttcagtaaaggttatctgctt
cctgaggagccgtatatccatgccagctaccggccagtggaagttccagtttcagagcaa
cctgagagtaaaacagtccttttaaaaaagaacagcagcttctctaagaaagatttttct
cctaacaataagcctgagcaagctgatgaagacctgctctctcagtatgtaaataataac
tcatcattagatgaaactgtaaaggttgaacgtgagccttttaatgcctctactcatgtt
gagtccggtaatgactctactcatatctctcttcaagaagaaaaccagtcttctcttact
cagggtctcccgggcacttctaccatcactgaagaaggtttatttagcaataaaagtttt
ctgattttgggttttggcaatgaaattgaatcaaatattataaatattataagagaaaac
gctggaaaaattgtgtcccttcagagcagaattattgctgattatgctgtggtccctctg
ctgggctgccaagtagaagcaactgtgggagaagttgttaccaatacttggctggtaaca
tgtctagactatgagactttatttgacccaaaatcagatcctctcttcacaccagtccca
gtaatgacaggaaagactcctttagaggattgtgttatttcattcagccagtgtgtaggc
gcagaaaaagaatctttggcctacttagcaaatctccttggagcgagtgttcaagaattc
tttgttcgcaaatcaagtgctaaaaaaggcatgcttgccagtacacatcttgtattgaaa
gaacctaatggttcaaaatatgaagcttccaaaaagtggaatttaccggcagtcagtgtt
gcttggctgttggagactgctaggactgggaagaaagcgaatgaaagcctctttctgatt
gaaaattcgccaaaagaagaacagagtgtggtaactgaaatagcaaatggcgcaaaactc
tctccgaaaattcctgagcctcctgttacacacctggaaactcacagcaaaacagccatt
aagcctctggacgtgaatcagtttcagagtaaagctttccaggcagtgatctcgcagcac
acgggacagggtccggttcccgctgcagagaacaagccgcctcaggagcagcccacactg
cacctggacacaccttcaaaatttctctccaaggacaaactcttcaagccgtcctttgat
gtgaaggatgcacttgcagccttggaaactcctggaggtcccacccagcgcaataggaaa
ttgagtacaccactctcagaagttattatcagaaacttgaaacttgctctggcaaatagc
tctcgaaatgccgacactctctctgccagccctcagctaaaggctgcccaatcaaagcag
gaagaagctgtaaagccacttcacaaagtagtggtctgtgttagtaaaaaactcagtaag
aagcagagtgaactaaatgggattgcagcctctcttggggcagattacaggtggaatttt
gatgagacagtcacccattttatttatcaaggacgaccaaatgacactaatcgagaatat
aaatctgtgaaggaaagaggtgtacacattgtttctgagcactggcttttagaatgtgcc
caagaatacaaacatctttctgagtctctttacccacatacctataatcccaaaatgagc
ttggatatcagcacagtacaagacagcagactctgtcacagccgactgccctcaaccgat
tcaacatcaacagaggatgaagagccagattatttacctgtagaggaaaatgatacagac
aatgttaccaccaataataaagaatcagcaacgtcagatgaaaatgaaaagaatgtccca
aaaggagccctgacacagaccttggagatgagagagaatttccagaaacagctgcaggag
atcatgtctgcaacgtcaatagtaaaggccccagggcagagggcttcgctgtcgaggagt
ggctgcaacagcacgtcctccactccggacagcacgcgctctgctcgcaacgggcgaagt
cgagtcctcgaggcactcaggcattctcgtcaaacagcacctgacataaatactgagccc
tcccagaatgaacaaatcatttgggatgaccctacagccagggaggagagagcaagactt
gccagcaacctgcagtggcctagtgatcccacacaatattcggagcctcaggttgacgtg
aagaaattggaggattttcctctccctgagtctctacaggatccagaaattgccaaagag
gctgtctgtaatcctggaagtaaatgtacgcgtgaggcctccaactgcccgagctctgaa
gaaccagaagccctgaccaaggacggccacctgattcctacacctcaggctcccagtatc
gcctttcccctcgccaaaccacctgtgcctccacacccgagagaaaagattacggtgatg
aaagagactcgtgaagacttgaaaaaaaagtacatatttcagttgtcatctctgaatcct
caagaacgtattgattattgccatctgattgaaaaactaggtggctccgtgatcgagaag
cagtgcttcgaccccagctgtacacacattgttgtgggccacccgcttcgcaatgagaag
tacctggcctcagtggcggctggcaagtgggtgctccatcgctcctaccttgaggcttgt
aggaccgctgggcgcttcgtgctggaagaagactatgagtggggaagcagttccataatt
gatgtcttgactggaatcactgtacagcagcgaagactagcacttgcagcaatgagatgg
aggaaaaccattcagcaaaaacaagaatccggcattgttgagggggcattcagtggttgg
aaagttattttacatgttgatccatcccgggaagcaggattcagacgccttcttcagtca
ggaggagctaaggtcctacatggtcattctgcccctttctataaagaagccacacatctc
ttttctgactataataaaatgagacaagatgactctggagttaatattgcagaagctgct
tcctataacgtgtactgcttgaagacagaatacattgctgattatattatgcaggaaact
cctcctcagatagaaaattactgtttaccagaagctgtttcatttcttcaaaataatatt
gaacctggatctggattatcacaaaagaggaaagttcctacagagaaaaatttaatcaaa
cgacctagagtatactga

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