Sorex fumeus (smoky shrew): 130030735
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Entry
130030735 CDS
T10594
Symbol
PAX1
Name
(RefSeq) paired box protein Pax-1
KO
K09382
paired box protein 1/9
Organism
sfum Sorex fumeus (smoky shrew)
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfum03000
]
130030735 (PAX1)
Transcription factors [BR:
sfum03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
130030735 (PAX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAX
HTH_23
HTH_32
HTH_28
Motif
Other DBs
NCBI-GeneID:
130030735
NCBI-ProteinID:
XP_055978049
LinkDB
All DBs
Position
Unknown
AA seq
428 aa
AA seq
DB search
MKFPLGLGARAWRVSRARAAAGPGAGAALGGGPRGSGRGSGLARALPICPSRRGRALPPR
AGPGRLGPRAMEQTYGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSH
GCVSKILARYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADG
VCDKYNVPSVSSISRILRNKIGNLTQPAPYEAGKQPPPQPALPYGHVYQYPYPGPVSPAG
AKMGSHHGVPGTAGHVSIPRSWPSAHSVSNILGIRTFMEQTGALAGADGASYSPKVEDWA
GVNRTAFPAAPTANGLEKPALEADIKYTQSASGLSAVGGFLPACAYPASNQHGVYSAPTG
SYLAPGPPWPPAQASPLAPSVHGGELTATMTFKHPSREVADRKPSSPGGKAPDSLGSLHG
LPGPASTS
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcccgctgggcctgggggcgcgggcgtggagagtgtcgcgggcgcgggcggcg
gcgggcccgggcgcgggggccgcgctcggcggcggcccgcgcgggtcgggccggggctcg
gggctcgcgcgcgcgctccctatatgcccgtcccgccgcggccgcgctctcccgccccgc
gcagggcccgggcggcttggcccgcgcgctatggagcagacgtacggcgaggtgaaccag
ctgggcggcgtgttcgtcaacggccgcccgctcccaaacgccatccgtttgcgcatcgtg
gagctggcccagctgggcatccggccctgtgacatcagccggcagcttcgcgtgtcgcac
ggctgcgtgagcaagatcctggcgcgctacaacgagaccggctccatcctgcccggggcc
atcgggggcagcaagccgagggtgacgacccccaacgtggtcaagcatatccgggactat
aagcagggcgaccctggcatcttcgcctgggagatccgggaccggctactggccgacggc
gtctgcgacaagtacaacgtgccctcggtcagctccatcagccgcatcctgcgcaataag
attggaaacctgacgcagcccgcgccctacgaggccggcaagcagccgccaccgcagcct
gcgctcccctacggccacgtctaccagtacccctaccccgggccggtgtcgcccgcggga
gccaagatgggcagccaccacggggtcccgggcacagcgggccacgtcagcatccctcgt
tcatggccctcggcccactcggtcagcaacatcctgggcatccggacattcatggagcaa
acaggggccctggccggggccgacggagcctcctattccccgaaggtggaagactgggcc
ggcgtgaaccgcacagccttcccggccgccccaaccgccaacgggctggagaagcctgcc
ttggaagcggacataaagtacacgcagtcagcctccggcctctcagcagtgggaggtttc
ctcccggcctgcgcttaccctgcctccaaccagcacggggtgtacagtgctccaaccggc
agctacctcgcccccggcccgccctggccaccagcacaggcctcccccctggcgcccagc
gtgcacggcggggagctcacagctacaatgaccttcaagcatcccagccgagaagtggcc
gaccggaagccgtccagccccggaggcaaagccccggacagccttggcagcttgcacgga
ctgcccggcccggcctcgacctcctag
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