Sorex fumeus (smoky shrew): 130030743
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Entry
130030743 CDS
T10594
Symbol
ATRN
Name
(RefSeq) attractin isoform X1
KO
K24332
attractin
Organism
sfum Sorex fumeus (smoky shrew)
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
sfum04091
]
130030743 (ATRN)
Lectins [BR:
sfum04091
]
C-Type lectins
Others
130030743 (ATRN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_ATRN-LZTR1
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_FBX42
GBD_ATRN
Kelch_1
EGF_LMN_ATRN
Kelch_2
PSI
CUB
Kelch_HCF
Beta-prop_Calicin
NANM
Beta-prop_TYW4
EGF_Teneurin
EGF_TEN
PSI_integrin
EGF_laminin
EGF_2
Motif
Other DBs
NCBI-GeneID:
130030743
NCBI-ProteinID:
XP_055978055
LinkDB
All DBs
Position
Unknown
AA seq
1426 aa
AA seq
DB search
MVAAAAATEARLRRRRRRRTEATTAPAGTDGGRRGDWDAPGAGRPGLGAGLRLLLPTPPP
PPLLLLLLPLLLPLPWAAEAAAAAAIVSGSAAAEAKECDRPCVNGGRCNPGTGQCVCPAG
WVGEQCQHCGGRFRLTGPSGFVTDGPGNYKYKTKCTWLIEGQPNRVMRLRFNHFATECSW
DHLYVYDGDSIYAPLIAAFSGLIVPERDGNDTVPEVVATSGYALLHFFSDAAYNLTGFNI
TYNFDMCPNNCSGRGECKISDGSNTVRCECSGNWKGEACDIPHCVNNCSFPRGGFCNPDN
VRGCSCFANWQGPGCSIPVPANQSFWTREEYSNLKLPRASHKAVVNGNIMWVIGGYMFNH
SDYSMVLAYDLSSKEWLTLNQSVNNVMVRYGHSLALHKGKIYMYGGKIDSTGNVTNELRV
FHIHNESWVLLSPRAKEQYAVVGHSAHIVTLSTDRVVMLVIFGHCPLYGYISNVQEYDLD
KNTWTILPTQGALVQGGYGHSSVFDRNTRAIYVHGGYKAFSANKYRLADDLYRYDVDTRM
WTILKDSRFFRYLHTAVVVSGTMLVFGGNTHNDTSMSHGAKCFSSDFMAYDIACDRWSVL
PRPGLHQDVNRFGHSAVLHNSTMYVFGGFNSLLLSDILVFTSERCEAHRNEAACLAAGPG
IRCVWDPTLTQCISWELANDEQQEKLKSECLSKRPLDHDRCDQHTDCYSCTANTNDCHWC
PDHCIPLNHSCAENQISIAKYENCPKDNPMYYCNKKTSCRSCALDQNCQWEPRNQECIAL
PENICGIGWHLVGNSCLKITTAKENYDNAKLSCRSHNAFLASLTTQKKVEFVLKQLRVMQ
SSQSLSKLTLTPWVGLRKINVSYWCWEDMSPFTNSLLQWMPSEPSDAGFCGILSEPSVRG
LKAATCINPLNGSVCERPANHSAKQCRTPCALRTACGECTSGSSECMWCSNMKQCVDSNA
YVASFPFGQCMEWYTMSSCPPENCSGYYTCSHCLEQPGCGWCTDPSNTGKGKCIEGSSKG
PVKMPSRAPTGSHYPQPLLNSSMCLEDGRYNWSFIQCPACQCNGHSKCINQSICEKCENL
TTGKHCETCISGFYGDPTNGGRCQPCRCNGHASLCNTNSGKCFCTTKGVKGDECQLCEVE
NRYQGNPLKGTCYYTLLIDYQFTFSLSQEDDRHYTAINFVATPDEQNRDLDMFINASKNF
NLNITWAASFSAGTQAGEEMPVVSKTNIKEYKDSFSNEKFDFRNHPNITFFVYVSNFTWP
IKIQIAFSQHSNFMDLVQFFVTFFSCFLSLLLVAAVVWKIKQSCWASRRREQLLREMQQM
ASRPFASVNVALETDEEPPDLIGGSIKTVPKPIALEPCFGNKAAVLSVFVRLPRGLGGIP
PPGQSGLAVASALVDISQQMPIVYKEKSGAVRNRKQQPPAQPGTCI
NT seq
4281 nt
NT seq
+upstream
nt +downstream
nt
atggtggcggcggcggcggcgaccgaggcgaggctgaggaggaggcggaggaggaggacg
gaggcgacgacagcgcccgcgggcacggacggcgggcgccgcggggactgggacgcgccc
ggggcggggaggccggggctgggggccgggctgcgcctcctgctcccgacgccgccgccg
ccgccgttgctgctgctgctgctgccgctgctgctgccgttgccttgggcggccgaggcc
gcggcggccgcggcgatcgtgtcgggctccgccgcagccgaggccaaggaatgtgaccgg
ccctgtgtcaacggcggccgctgcaaccctggcaccggccagtgcgtctgccccgccggc
tgggtgggcgagcaatgccagcactgcgggggccggttcagactaactggaccttctggg
tttgtaacagatggacctggaaattacaaatataaaaccaagtgcacatggctcattgag
ggacagccaaatagagtaatgagacttcgtttcaatcattttgctacagagtgtagttgg
gaccatttatacgtttatgatggggactcaatttatgcacccctaattgccgccttcagc
ggcctcattgttcctgagagagatggcaacgacactgtccctgaggtggtcgccacatca
ggctatgccctgctgcatttcttcagtgatgctgcttataatctgactggattcaatatc
acttacaattttgacatgtgtccaaataattgctcaggccgaggagaatgtaagatcagc
gacggcagcaacacggtgcgatgtgaatgctctggaaactggaaaggggaagcctgtgac
attccccactgtgtcaataactgtagctttccccgaggaggcttctgcaatccagataac
gtcagaggctgctcctgctttgcgaactggcagggtcccggatgttcaattcctgtacca
gctaaccagtcattttggactcgagaggaatattctaacctaaagcttcccagagcctct
cacaaggcggtggtcaatggaaacataatgtgggtcattggcgggtacatgttcaaccac
tcagattacagcatggttctcgcatacgatctttcctctaaggagtggcttacactgaac
cagtctgtgaacaatgtcatggttagatacggacattccttagcgttacacaagggaaaa
atttacatgtatggaggaaaaattgattcaacagggaatgtaaccaatgagttgagagta
tttcatattcataatgagtcctgggtgctgctgagcccccgagccaaggagcagtatgcc
gtagttgggcattcggcacatatcgtcacattgagcactgaccgtgtggtcatgctggtc
atctttggtcactgtcccctctatggatacataagcaacgtgcaggaatatgacttggat
aagaacacgtggacgatactgcccacccagggcgccctggtccaaggaggctacggccac
agcagcgttttcgaccgcaacacgagggccatctacgtccacggaggctacaaggctttc
agtgccaacaaataccgactcgccgacgatctctacagatatgacgtggacacgaggatg
tggaccatcctcaaggacagccggttcttccgctacctgcacaccgcggtggtggtgagt
ggcaccatgctggtgttcggagggaacacgcacaatgacacctccatgagccacggcgcc
aagtgcttctcctcagacttcatggcttatgacattgcttgtgaccgctggtccgtgctc
cccaggcctggcctccatcaggacgtcaacagattcggccactcggcagtcttgcacaac
agcaccatgtatgtgtttgggggtttcaacagtctcctgctcagtgacatcctggtcttc
acctcggagcgctgtgaggctcaccggaacgaggctgcctgcttggccgcgggccccggc
atacgctgcgtgtgggacccgactctgactcagtgcatctcctgggagctggcaaatgac
gagcaacaggagaagttgaaatcagagtgtttatccaaaagaccccttgaccatgacaga
tgtgaccagcacacggattgctacagctgcacggccaacacgaatgattgccactggtgc
ccggaccactgcatccccctgaaccacagctgcgcggagaaccagatctccattgccaag
tatgagaattgtcccaaggataaccccatgtattactgtaacaagaagaccagctgcagg
agctgtgccctggaccagaactgtcagtgggagcctcggaatcaggagtgcatcgccttg
cctgaaaatatctgcggcattggatggcatttggtcggaaactcatgcctgaagatcacg
acggccaaagagaactacgacaacgctaagctgtcctgccggagccacaatgccttcctg
gcctccctcaccacccagaagaaggtcgagtttgtcctgaagcagctgcgggtaatgcaa
tcctcgcagagcttgtccaagctcaccctgaccccgtgggttggcctccggaagatcaat
gtgtcctactggtgctgggaggacatgtcccccttcacgaacagcctgctgcagtggatg
ccgtcggagcccagcgatgcgggcttctgtggaatcctgtcggagcccagcgtgcggggc
ttgaaggcggccacatgcatcaaccccctcaacggcagtgtctgcgaaaggcctgccaac
cacagcgccaagcagtgccggaccccgtgcgccctgcggacggcgtgtggcgagtgcacg
agcggcagctccgagtgcatgtggtgcagcaacatgaagcagtgcgtggactccaacgcc
tacgtggcctccttccccttcggccagtgcatggagtggtacaccatgagcagctgcccc
cctgaaaactgttcaggctattacacctgcagtcattgcttggagcagccaggctgtggc
tggtgcacggaccccagcaacacaggcaaagggaagtgcatcgaaggttcctcaaaagga
cctgtgaagatgccctcaagagcgccgacaggcagccactacccacagcccctcctcaac
tccagcatgtgtctggaggacggcagatacaactggtctttcattcagtgtccagcttgt
cagtgcaatggccacagcaaatgcatcaaccagagcatctgtgagaagtgtgaaaacctg
accacgggcaagcactgtgagacctgcatctctggcttctacggggaccccaccaatgga
gggaggtgtcagccgtgcaggtgcaacgggcatgcctcgctgtgcaacaccaactcgggc
aagtgcttttgcaccaccaaaggcgtcaagggcgacgagtgccagctatgcgaggttgaa
aatcggtaccaggggaaccctctcaaaggcacctgctactatactctccttattgattac
cagttcaccttcagtctgtcccaggaagatgatcgtcactacacagccatcaattttgtg
gctacacccgatgaacaaaacagggacttggacatgttcatcaatgcctccaaaaacttc
aacctcaacatcacctgggctgccagtttctcagctgggactcaagctggagaagaaatg
ccagttgtttccaaaaccaacattaaggagtacaaagatagcttctcgaacgagaagttt
gattttcgcaaccacccaaatattactttctttgtttacgtcagtaatttcacctggccc
atcaaaattcagatcgccttctcccagcacagcaattttatggacctggtacagttcttc
gtgacattcttcagctgcttcctctctctgctcctggtggccgcggtggtctggaagatc
aagcagagctgctgggcctcccggcgccgagagcaacttcttcgagagatgcagcagatg
gccagtcgtccctttgcctcggtaaatgttgccttggagacagacgaagagcctcccgat
ctgattggggggagcatcaagactgtccccaagcccatcgccctggagccctgtttcggc
aacaaagctgctgtcctgtccgtgtttgtgaggctccccagaggcctggggggaatcccg
cctcccggccagtcaggtctcgcagtggccagcgccctcgtggacatctcccagcagatg
cccatcgtgtacaaagagaagtctggggccgtgcgcaaccggaagcagcagccccccgcg
cagcccgggacgtgcatctga
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