Sorex fumeus (smoky shrew): 130030745
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Entry
130030745 CDS
T10594
Symbol
NKX1-1
Name
(RefSeq) NK1 transcription factor-related protein 1
KO
K09309
homeobox protein Nkx-1
Organism
sfum Sorex fumeus (smoky shrew)
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfum03000
]
130030745 (NKX1-1)
Transcription factors [BR:
sfum03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
130030745 (NKX1-1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
Motif
Other DBs
NCBI-GeneID:
130030745
NCBI-ProteinID:
XP_055978060
LinkDB
All DBs
Position
Unknown
AA seq
439 aa
AA seq
DB search
MSASGPAAPGDGPALPPPPPGPGPGPAAPAPAAAAARDAMDGRAEPPAFPRPGAPPLAAS
DTVPAAPEGAGAARPAPPPRPTSFSVLDILDPNKFNSRRRRCVLLGPVAPAACAPCAPGP
CAPAPAAPGHPPRAEELERRTLAAAGAAAGAEPPRAGDPYKVDEADANGYSSGGGRSPSA
DSGDEAPDEEEDDEDAAPSAEAARGPEEARGCGGSGGARGSGCPGAAETEATPGAVDDSG
NPGPRGNSSGAAGLPGPSAAGGGGPAPQSTAKPKRKRTGSDSKSGKPRRARTAFTYEQLV
ALENKFKATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQNPGADTSAPTGGGGG
AGPGAGPGAGLPGGLSPLSPSPPMGAPLTMHGPAGYPAHGPGGLVCAAQLPFLSSPAVLS
PFVLGSQTYGTPAFYAPHL
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccagcggcccggcggctcccggggacggccccgcgctcccgccgccgccgccc
gggcccggcccgggacccgcagcgcccgcgcccgccgccgccgccgcccgggacgccatg
gacgggcgcgccgagccgcccgccttcccgcggcccggagcccctccgctcgcggccagc
gacacggtgcccgcggcgcccgagggggctggcgcggcccgccccgccccgccgccgcgc
cccacctccttctcggtgctggacatcctggaccccaacaagttcaacagcaggagacgc
cgctgcgtgctgctgggccccgtggcgcccgccgcgtgcgccccgtgcgccccgggtccg
tgcgccccggcccccgccgccccgggacacccgccgcgcgcggaggagctggagcgccgc
acgcttgccgccgcgggagccgccgccggagccgagccgccccgcgctggcgacccctac
aaggtggacgaggcggacgccaacggctacagcagcggcggcggccgcagccccagcgca
gacagcggggacgaggcgcccgacgaggaggaggatgacgaggatgcggcacccagcgcg
gaggcggcacgagggccggaggaggcgcgcggctgtggtggcagcggcggggcccgcggg
tcgggctgtccgggcgcagccgagaccgaggcgaccccgggcgccgtcgacgactctggg
aaccccgggccccgcgggaactcgtcgggggccgccggcctgccgggcccttcggcggct
gggggcggggggccggccccgcagagcacagccaagcccaagcgcaaacgcacgggttcc
gactccaaatctggaaagccgcggcgagcgcgcaccgccttcacctacgagcagctcgtg
gcgctggagaacaagttcaaggcgacacgctacctctcggtctgcgagcgcctcaacctg
gccctgtcgctcagcctcaccgagacgcaggtgaagatctggttccagaaccgccgcacc
aagtggaagaagcagaacccgggtgccgacacgagcgcgcctaccggcggcggcgggggc
gcggggcccggcgcgggccccggcgcagggctgcctgggggactcagtccactcagcccg
tcgccgcccatgggcgcgccgctcaccatgcacggaccggccgggtaccccgcgcacggt
cccgggggcctggtgtgcgccgcgcagctgcccttcctgtccagcccggccgtgctgtcg
cccttcgtgctgggctcgcagacctacggcactcccgccttctatgcaccgcacctctag
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