KEGG   Sorex fumeus (smoky shrew): 130031074
Entry
130031074         CDS       T10594                                 
Symbol
PRPF38A
Name
(RefSeq) pre-mRNA-splicing factor 38A
  KO
K12849  pre-mRNA-splicing factor 38A
Organism
sfum  Sorex fumeus (smoky shrew)
Pathway
sfum03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sfum00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    130031074 (PRPF38A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sfum03041]
    130031074 (PRPF38A)
Spliceosome [BR:sfum03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    130031074 (PRPF38A)
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    130031074 (PRPF38A)
SSDB
Motif
Pfam: PRP38 PRP38_assoc
Other DBs
NCBI-GeneID: 130031074
NCBI-ProteinID: XP_055978294
LinkDB
Position
Unknown
AA seq 312 aa
MANRTVKDAHSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELRFVGGV
YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRMLGALYMRLTGTAIDCYKYL
EPLYNDYRKIKSQNRNGEFELMHVDEFIDELLHSERVCDIILPRLQKRYVLEEAEQLEPR
VSALEEDMDDVESSEEEEEEDEKLERVPSPDHRRRSYRDLDKPRRSPTLRYRRSRSRSPR
RRSRSPKRRSPSPRRERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRSHRHRSHSKSPERS
KKSHKKSRRGNE
NT seq 939 nt   +upstreamnt  +downstreamnt
atggcgaaccgcacggtgaaggatgcgcacagcatccacggcaccaaccctcagtatctg
gtggagaagatcattcggacgcgaatctacgagtccaagtactggaaagaagagtgcttc
gggctcacggctgaacttgtagttgataaagccatggagttaaggtttgtcggtggtgtc
tatggaggcaacataaagccaactcctttcctgtgtttgacactgaagatgctacagatc
cagcccgagaaggatatcattgtagaatttataaaaaatgaagatttcaagtatgtccgc
atgctgggtgcactttacatgagactgacaggcactgccattgattgctacaagtactta
gagcctctctacaatgactacagaaaaatcaagagtcagaaccgtaatggggagtttgaa
ctgatgcatgtagatgagtttattgatgaactactgcacagcgagagagtctgtgatatc
attctgcctcggctacagaaacgctacgtgctagaggaagctgagcaattggagcctcgg
gttagtgctctggaagaagacatggatgacgtggaatccagtgaagaagaggaagaggag
gatgagaagttggagagagtgccatcacctgatcaccgccggagaagctaccgagactta
gacaagccccggcgctctcccactctgcgctataggaggagtagaagcaggtctcctaga
agacggagtcgatctcccaagaggaggagtccctcccctcgacgagaaaggcatcggagc
aagagcccaagacgtcaccgaagcagatcccgagatagacgccacagatcccgctccaag
tccccaggtcatcaccgtagtcatagacatagaagtcattcaaagtctcctgaaagatct
aagaaaagccataagaagagtcgaagagggaatgaataa

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