Sorex fumeus (smoky shrew): 130031082
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Entry
130031082 CDS
T10594
Symbol
PARS2
Name
(RefSeq) probable proline--tRNA ligase, mitochondrial
KO
K01881
prolyl-tRNA synthetase [EC:
6.1.1.15
]
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
130031082 (PARS2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sfum01007
]
130031082 (PARS2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfum03016
]
130031082 (PARS2)
Enzymes [BR:
sfum01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.15 proline---tRNA ligase
130031082 (PARS2)
Amino acid related enzymes [BR:
sfum01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
130031082 (PARS2)
Transfer RNA biogenesis [BR:
sfum03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
130031082 (PARS2)
Prokaryotic type
130031082 (PARS2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
Zf_2nd_IFT121
Motif
Other DBs
NCBI-GeneID:
130031082
NCBI-ProteinID:
XP_055978306
LinkDB
All DBs
Position
Unknown
AA seq
472 aa
AA seq
DB search
MEGLLTRCRPLAARSPHLGHGLPPRFHHCAPGRGKRLVLSRMFQPQNLREDQVLSLEGRS
SDLTCKSQRLMLRVGLIHPAGPGCYHLLPYTVRALEKLVRVIDQEMQAIGGQKVNMPSLS
PAELWRATNRWDLMGKELLRLRDRHGKDYCLGPTHEEAITALVAAQKTLSYKQLPFLLYQ
VTRKFRDEPRPRFGLLRGREFYMKDMYTFDASVDAAQQTYGLVCEAYGRLFDRLGLRCVK
VQADVGSIGGTMSHEFQLPVAVGEDRFALCPSCGFSANTETLDLSQKNCPACQGSLTETR
GIEVGHTFYLGTKYSSIFNAQFTNERGEPTLAEMGCYGLGVTRILAAAIEMFSTEDSVRW
PGLLAPYQVCLVPPKRGSKEAAATELAELLYDQITEAVPQLRGEVLLDDRTHLTIGNRLK
DANTLGYPFVIVAGRRALEEPAQFEVRCQNTEEVLFLSREGVLELLRPVQVG
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggaagggctactcacacgatgcagaccactggctgcccgcagcccccacctcggccac
ggcctgcctcccaggtttcaccactgcgccccagggagagggaagcgcctggtgttgtct
cggatgttccagccgcagaaccttcgggaggaccaggtgctgtccctggagggcagatcc
agcgacctgacctgtaagagccagcggctgatgctacgggtgggcttgatccacccggcc
ggcccgggctgctaccacctgctgccatataccgtccgggccttggagaagctggtgcgg
gtgatagaccaggagatgcaggccatcggcgggcagaaggtcaacatgcccagcctcagc
cctgccgagctgtggcgagccaccaaccggtgggacctgatgggcaaggagctgcttcga
ctcagggacaggcacggcaaggactactgcctgggccccacgcacgaggaagccatcacg
gccctggtcgccgcccagaagaccctgtcctacaagcagctcccgttcctgctctaccag
gtgaccaggaagttccgtgacgagccccggccccgcttcgggcttctccggggccgagag
ttttacatgaaggacatgtacacctttgatgcctccgtggatgccgcccagcagacctac
gggctggtgtgtgaggcctacgggcgcctcttcgaccggctggggctgcgctgtgtgaag
gtccaggccgacgtgggcagcatcgggggcaccatgtcacatgagttccagctcccagtg
gcggtaggagaggaccgttttgcactgtgccccagctgcggcttctccgctaacaccgag
acgctggacctgtcacagaagaactgcccagcctgccaggggtccctgaccgaaaccaga
ggcatcgaggtggggcacacgttctacctgggtaccaagtattcatccatcttcaacgcc
cagtttaccaatgagcgcggtgagcccaccctggccgagatgggctgctacggcttggga
gtgacccggatcctggcggctgccatcgagatgttctccacggaagactccgtgcgctgg
cccggcctcctggccccttaccaagtctgcctcgtgcccccaaagagggggagtaaggag
gcagcggccaccgagctcgctgagctcttatatgaccagatcacggaggcagtaccccag
ctccgtggggaggtcctgctggatgatcggacccacctgaccatcgggaacagactgaaa
gatgccaacacgctcggctacccctttgtgattgtcgctggcaggagggccctggaggag
cccgcgcagttcgaggtgcgatgccagaacacagaggaggtgctcttcctcagcagagaa
ggcgtcctggagttactgcgcccagtgcaggtgggctga
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