Sorex fumeus (smoky shrew): 130031111
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Entry
130031111 CDS
T10594
Symbol
PARN
Name
(RefSeq) poly(A)-specific ribonuclease PARN
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum03018
RNA degradation
Brite
Enzymes [BR:
sfum01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
130031111 (PARN)
Messenger RNA biogenesis [BR:
sfum03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
130031111 (PARN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
130031111
NCBI-ProteinID:
XP_055978350
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Position
Unknown
AA seq
637 aa
AA seq
DB search
MEIIRSNFKSSLPKVYQAIEEADFFAIDGEFSGISDGPSVTALTNGFDTPEERYQKLKKH
SMDFLLFQFGLCTFKYDHADSKYVTKSFNFYVFPKPFNRSSPDVKFVCQSSSIDFLASQG
FDFNKVFRNGIPYLNQEEERQLREQYDEKRSQSNGAGALAYVSPNASKCPVMIPEDQKKF
INQVVEKIENLLQNEENKNLDLEPCTGFQRKLIYQTLSWKYPKGIHVETLETEKKERYIV
ISKVDEEERKRREQQKQAKEQEELNDAVGFSRVVHAIANSGKLVIGHNMLLDVMHTVHQF
YCPLPTDLNEFKEMTTCVFPRLLDTKLMASTQPFKDIINNTSLAELEKRLKATPFSPPKV
ESAEGFPSYDTASEQLHEAGYDAYITGLCFITMADYLGSFLSPPKIHVSARSKLIEPFFN
KLFLMRVMDIPYLNLEGPDLQPKRDHVLHVTFPKEWKTSDLYQLFSAFGNIQISWIDDTS
AFVSLSQPDQVQIAVNTSRYAESYRIQTYADYVGRKQEERQVKRKWAEDGWKEAERKRLH
TQRLSFAPQDHAHRAGSLTVPGSGEKRTVSPSLAEADSEARVSELSDADLEPTEPSTEAL
SEGRKKAKKLKRMKKDLSPPGSFSDDSAALFEVPDTW
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atggagatcattcggagcaattttaagagcagcctccccaaggtgtaccaggccatcgag
gaggccgacttcttcgccatcgacggggagttctcgggaatcagtgatggaccttcagtc
actgcattaacaaatggttttgacactccagaggaaaggtatcagaagcttaaaaagcat
tccatggactttttgctgtttcagtttggcctttgcacttttaaatatgaccacgcagat
tcaaagtatgtaacaaaatcattcaacttctacgttttcccgaaacccttcaacagatcc
tcaccagatgtcaaatttgtttgccagagctcgagcattgactttctggcgagccaaggc
tttgattttaacaaagtttttcgcaatggaattccatatttaaatcaggaagaagaaagg
cagttacgagagcagtatgatgagaagcgctcccagtccaatggtgcaggagctctcgcg
tatgtttctcctaatgcttccaaatgtcccgtaatgattcccgaggatcagaagaagttc
attaaccaagtggtagagaaaattgaaaatttattgcagaatgaagaaaacaagaactta
gatttagagccgtgtactgggttccagagaaagctaatctaccagactttgagctggaag
taccccaagggcattcacgttgagactttagaaacggaaaagaaagaacggtacatcgtt
atcagcaaagtcgatgaagaagagcgtaaacggcgagagcagcagaaacaagccaaagag
caggaggagctgaatgacgctgtgggattttctagagttgttcatgccatagctaactcg
ggaaagctggtcatcggacataatatgctcctggacgtcatgcacacggtccatcagttc
tactgcccgctgcccacggacttaaacgagtttaaggagatgacgacgtgtgttttcccc
agactcctggatacaaaattgatggccagcacacagccttttaaggacatcatcaacaat
acttcccttgcggaattagaaaagcggttaaaagcgacaccattcagccctcctaaagtt
gaaagtgccgaaggttttccgagctacgacacggcgtcggagcagctgcacgaggcgggc
tacgacgcttacatcacggggctgtgcttcatcaccatggccgactaccttggctccttc
cttagtcctccaaaaatccatgtgtctgccagatcaaagctcattgaacctttttttaac
aagttatttcttatgagagtcatggatatcccgtacctaaacttggaaggacccgacttg
cagcctaaacgcgaccatgttctccacgtgaccttccccaaagagtggaaaaccagtgat
ctgtaccagctcttcagtgcctttggtaacattcagatctcctggattgatgacacttcg
gcatttgtttctctcagccagcctgaccaggtacaaatcgctgttaacaccagcagatac
gccgaaagctaccggatccagacatacgccgactacgtgggcaggaagcaggaggagagg
caggtcaagaggaagtgggccgaggacggctggaaggaggcggagcgcaagcgcctgcac
acgcagcgcctgtccttcgccccgcaggaccacgcgcaccgcgccggcagcctcacagtg
cccggctcgggagaaaagaggaccgtgagtcccagcctggccgaggcagactcggaggct
agggtctcggagctctcggacgctgacctggagccgacggagcccagcacagaggcactc
tcggagggcaggaagaaggccaagaagttgaagaggatgaagaaagacctgtctccccca
ggaagcttctcagatgactctgccgccctctttgaagtccctgacacgtggtaa
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