Sorex fumeus (smoky shrew): 130031276 Help Entry 130031276         CDS       T10594                                  Symbol CCDC88A Name (RefSeq) girdin isoform X1   KO K25392   girdin Organism sfum  Sorex fumeus (smoky shrew) Brite KEGG Orthology (KO) [BR:sfum00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:sfum03037]     130031276 (CCDC88A) Cilium and associated proteins [BR:sfum03037]  Primary cilia and associated proteins   Other primary cilia associated proteins    130031276 (CCDC88A) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  HOOK_N APG6_N Motif Other DBs NCBI-GeneID:  130031276 NCBI-ProteinID:  XP_055978519 LinkDB All DBs Position Unknown AA seq 2024 aa AA seqDB search MENEIFTPLLEQFMTSPLVTWVKTFGPLAAGNGTNLDEYVALVDGVFLNQVMLQINPKSE SQRVNKKVNNDASLRIHNLSILVRQIKFYYQETLQQLIMMSLPNVLIIGKNPFSEQGTEE VKKLLLLLLGCAVQCQKKEEFIERIQGLDFDTKAAVAAHIQEVTHNQENVFDLQWMEVTD MSQEDIEPLLKNMALHLKRLIDERDEHSETIIELSEERDGLHFLPHGSSSAQSPCGSPGM KRTESRQHLSVELADAKAKIRRLRQELEEKTEQLLDCKQELEQMEIELKRLQQENMNLLS DARSARMYRDELDALREKAVRVDKLESEVSRYKERLHDIEFYKARVEELKEDNQVLLETK TMLEDQLDGTRARSDKLHELEKENLQLKAKLHDMEMERDMDRKKIEELMEENMTLEMAQK QSMDESLHLGWELEQISRTSELSEAPQKSLGHEVNELTSSRLLKLEMENQSLTKTVEELR STMDSTGGNTSKILKIEKENQRLNKKVEILENEIIQEKQSLQNCQNLSKDLMKEKAQLEK TIETLRENSERQIKILEQENEHLNQTVSSLRQRSQISAEARVKDIEKENKILHESIKETS SKLSKIEFEKRQIRKELEHYKEKGERAEELENELHHLEKENELLQKKITNLKITCEKVES LEQENSELERENRKLKKTLDGFKNLTFQLESLEKENSQLDEENLELRRNVESLKCASMKM AQLQLENKELESEKEQLKKGLELMKASFKKTERLEVSYQGLDTENQRLQKALENSNKKIQ QLESELQDLEMENQTLQKNLEELKISSKRLEQLEKENKSLEQETSQLEKDKKQLEKENKR LRQQAEIKDTTLEENNVKIGNLEKENKTLIKEICIYKESCIRLKELEKENKELVKRATID VKTLVTLREDLVNEKLKTQQMNNDLEKLTHELEKIGLDKERLLQDEQNTDDRYKLLESKL ESTLKKSLEIKEEKIAALEARLEESTNYNQQLRQELKTVKKNYEALKQRQDEERTVQSSP PTSGEDNKWERESQETTRELLKVKDRLIEVERNNATLQAEKQALKTQLKQLETQNNNLQA QILALQRQTVSLQEQNTTLQTQNAKLQVENSTLNSQSTSLMNQNAQLLIQQSALENENES VIKEREDLKSLYDSLVKDHEKLELLHERQASEYESLIAKHGTLKSAHKNLEVEHKDLEDR YNQLLKQKGQLDDLEKTLKVEQEKMLLENKNHETIAAEYKKLCGENDRLNHIYNQLLKDS EVLQADHKNLKSLLNNSKLEQTRLEAEFSKLKEQYQQLDITSTKLNNQCELLSQLKGNLE EENRHLLDQIQTLMLQNRTLLEQNMESKDLFHVEQRQYIDKLNELRRQKEKLEEKIMDQY KFYDPSPPRRRGNWITLKMRKLIKSKKDINRERQKSLTLTPTRSDSGEGFLQLPHQDSQD SSSVGSNSLEDGQNLGTKKSSMVALKRLPFLRNRPKDKDKMKACYRRSMSMNDLMQSMVL AGGQWTGSTENLEVPDDISTGKRRKELGAMAFSTTAINFSTVNSSTGFRSKQLVNNKDTT SFEDISPQGISDDSSTGSRVHASRPASLDSGRTSTSNSNNNASLHEVKAGAVNIQSRPQS HSSGEFSLLHDYEAWSSSGSSPIQYLKRQTRSSPVLQHKMPETLESRTYHKIKTGSPGSE VVTLQQFLEESSKLTSIQIKSSSQENLLDEVMKSLSVSSDFLGKNKPVSCGLARSVSGKA PGDFCDRRTTKPEQFVRHDPRKTEDTSFSSSPGKPTQGKRKLVKETSLSRQSKDSNPYAT LPRASSVISTAEGTTRRTSIHDFLTKDSRLPVSVDSPPATVDSNITAASSEYCLHQWSFH TPHSPTHTVVSHTQNDLTISTPLYTQTGISRTERSHFLKQTFAPINTANDTSRILAKDCL ESFTVAHPSQTFLSLNTELVSNISGLPPRPVIKLTDQASASLDKAAQKDNEQFSDNQSPS NSKPQSFVDSSNIAISACLYPNDTEAELLVSEDNQTVWYEYGCV NT seq 6075 nt NT seq  +upstreamnt  +downstreamnt atggagaacgagatttttaccccccttctggagcagttcatgaccagccccctggtcact tgggtgaaaacgtttggacctctggccgcgggaaatgggaccaacctggatgagtatgtg gctctggtcgatggtgtcttcttgaaccaggtcatgcttcaaattaatcctaaatcggag agtcagagagtaaataaaaaagtcaacaatgatgcctcactcagaattcataatctatcc attttggtgagacagataaaattttattatcaggagactttgcagcagttgatcatgatg tcattgccgaatgtcttaattattggcaaaaatcccttttctgaacaaggcacagaagaa gttaaaaagttgcttttacttttactgggttgtgcagttcagtgtcagaaaaaagaagaa tttattgaaagaattcaaggtttagattttgatacaaaagcagctgttgccgcacatatt caagaggtaactcataatcaggaaaatgtatttgatctacaatggatggaagtaactgat atgtctcaagaggatattgaaccacttttgaaaaatatggcattgcatctaaaaagactt atagatgaaagagatgaacattcagagactatcatagaactctctgaagagcgggatggt cttcattttctaccccatggttcttcatctgcacaatcaccatgtggttctccaggcatg aagcgaacagaaagtcgacagcatctgtcagtagaattggcagatgctaaggccaagata agaaggcttaggcaggaattggaagaaaaaactgaacagttattggactgtaaacaagaa cttgagcaaatggaaatagaactgaaaaggctgcaacaagagaacatgaatttgctttcg gatgccagatctgcaagaatgtaccgagatgaattagatgcacttcgagagaaggccgtc agagttgataagcttgaaagtgaagtcagcagatataaagagagactgcatgatattgaa ttttataaggcaagagttgaggaattaaaagaagacaatcaagttttattagaaacaaaa accatgctggaagatcagttagatggaactcgagcccgttctgataaattgcacgaatta gaaaaagagaatttacaactaaaggctaaactgcatgatatggagatggaacgtgatatg gataggaaaaagattgaagaattaatggaagaaaacatgactttggaaatggcacagaag caaagtatggatgaatcattacatcttggctgggagctggaacagatatccagaactagt gaactttctgaagcaccacagaaatctttgggccatgaggtaaatgagctgacatcaagt agattattgaagttagagatggaaaaccagagtttgactaaaactgtagaagagcttcgg agtactatggattctacaggaggcaatacttccaaaatcctgaaaattgaaaaagaaaat caaagactaaataaaaaggttgaaattcttgaaaatgaaattattcaagaaaagcaaagt cttcagaattgtcagaacttaagcaaggatctaatgaaggagaaagctcagcttgaaaaa acaatcgaaactcttagagaaaattcagagagacagattaaaatattggaacaggaaaat gagcatctgaatcaaactgtgtcttctttgaggcagcgctcccagataagtgctgaagca agggtgaaggacattgaaaaagaaaataaaattctccacgaatctatcaaagaaacaagc agcaagctaagcaaaattgaatttgaaaaaagacaaattagaaaagaattagaacattat aaagagaaaggagaacgagcagaagaacttgaaaatgaattgcatcatcttgaaaaggaa aatgaattgttacagaaaaagataaccaatttaaaaattacttgtgaaaaagttgagtcc ttagaacaagaaaattcagagctagaaagagaaaataggaaattgaaaaaaactttggat ggttttaaaaaccttacttttcagctagaatctctcgaaaaagagaattcccagctagat gaggaaaacttagaactgcgaaggaatgtggaatctttgaaatgtgcaagcatgaaaatg gctcagctacaactagaaaacaaagagttggaaagtgaaaaagagcaactgaaaaagggt ttagaactcatgaaagcatctttcaagaaaacagaacgtttagaagttagttaccagggt ttagatacagagaaccaaagattacagaaagcgctagaaaatagcaataaaaaaattcaa caattagagagtgagctacaagacttagagatggaaaatcaaacattgcagaaaaattta gaagagttaaaaatatctagcaaaagattagaacagctggagaaagagaataaatcatta gagcaagagacttctcaactggaaaaagataaaaagcaactggagaaggaaaacaagaga ctccgacaacaagcagaaataaaagataccacattagaagaaaataatgtgaaaattgga aatttggaaaaagaaaacaaaaccttaatcaaggagatttgtatttataaagaatcctgc atccgtctgaaagagttggagaaagaaaataaggagcttgtaaagagagcaactattgat gtaaaaactttggtcacattacgtgaggacttggtgaatgaaaaattgaagacacaacaa atgaataatgatctagaaaaattaactcatgaacttgaaaagataggattagataaagaa cgactcttacaagacgagcaaaatactgatgacagatacaaacttttggaatcaaaatta gaatccactctaaagaaatcccttgaaataaaagaagaaaaaattgctgccttagaagct cgattagaagaatccacaaattataaccaacaattacgccaggaacttaaaacggtgaaa aagaattatgaagctctgaaacagagacaagatgaggaaagaacagtgcagagctctcct ccaacatctggtgaagataacaaatgggagcgagaaagtcaggaaacaactagagaactt ttgaaagttaaagacagattaattgaagtagaaagaaataatgctacactgcaagcagaa aagcaggcattgaaaactcaactgaagcaactggaaacacagaacaataatttgcaggca cagattcttgcactgcagaggcaaacagtatcgttacaggaacagaatactactcttcag acacagaatgcgaagcttcaggttgaaaattccaccctgaactctcaaagtacctcactt atgaaccagaatgcacaactgctaatccagcagtcagccttagaaaatgaaaatgaatct gtaatcaaagaaagagaagacctgaaatcactctatgattctttggtcaaagatcatgaa aaactggaacttcttcatgaacggcaggcttcagaatatgaatctcttattgccaaacat ggaacactaaaatctgcacacaaaaatcttgaggtggaacataaagaccttgaagatcgg tataatcagttattaaaacagaaaggacagttggatgatttggaaaaaacattgaaagta gaacaggagaagatgttgcttgaaaacaaaaaccatgagactatagctgcagagtacaag aaactttgtggtgaaaatgataggttgaatcatatatataatcagcttctaaaagactct gaagttttacaagcagatcataaaaacttaaaaagtcttttaaataattccaaactggaa caaacaagattagaagctgaattttctaagttaaaggaacaataccagcagttggatatc acatcaaccaaattgaataaccagtgtgagttgctaagccagctaaaaggaaatttagaa gaagaaaatcgacatctgctagatcaaattcagacattaatgctacagaacagaacacta ttggagcagaatatggaaagcaaggacctttttcatgttgaacaaagacaatacattgat aagttaaatgaattaagacgacaaaaggaaaaactcgaagaaaaaattatggatcaatac aaattttatgacccatctcctcctcgaaggagaggcaactggattactctgaaaatgaga aaattgataaaatctaagaaagatattaatcgagaacgtcaaaaatctctaacattaact cctacccgctcagactccggtgaaggatttcttcagctacctcatcaagatagtcaggat agttcttcagtaggttcaaactctttagaagacggccaaaatttgggaaccaagaaaagc agcatggttgcactgaaaagactgccctttttgaggaacagaccgaaggataaagacaaa atgaaggcctgctatcgtcgttccatgtccatgaatgacctgatgcagtccatggtccta gcaggaggacagtggacaggtagtactgagaatttggaggttcctgatgatatttcaact ggtaaaaggaggaaagaattgggagctatggccttctctactacagccatcaacttttca actgtcaactcttctacaggcttcagatccaagcagttggttaataataaagatactaca tcttttgaagatataagtccacaaggtattagtgatgattctagtacgggatcaagagtt cacgcttcaagaccagccagccttgatagtggcagaacatccactagcaatagcaataat aatgcttcactccatgaagtcaaagcaggtgctgttaatattcaaagcagaccacaaagc cacagcagtggagaatttagtctgcttcatgattatgaggcttggtccagcagtggtagc agtccaattcagtacttgaaaagacaaaccagatcaagcccagtgcttcagcacaaaatg cctgaaacattagagagtcgaacatatcacaagataaaaactgggtcccctggaagtgaa gttgtaactctccaacagtttttggaagaaagcagcaagcttacctcaatacagataaaa tcctcaagtcaagagaatcttttagatgaagtaatgaaaagtttatctgtctcctctgac tttttgggaaaaaataagccagttagctgtggcctggctaggtcagtaagtggaaaagcc ccaggagacttctgtgatagacggacaactaaacctgaacaatttgtgagacatgatcct cgaaagactgaggatacttccttcagtagttctccagggaaacctactcaaggaaagaga aaattagtaaaagaaacttctttgtcaagacaatcaaaagatagtaatccttatgccact ttacctcgtgcaagcagtgtgatctctactgctgaaggaactacccggaggacaagcatc catgattttttgaccaaggacagtagattacctgtatcagttgattcgccaccagctact gttgatagcaacatcactgcagcatctagtgagtactgtttgcatcagtggtcctttcat acaccccatagtcccacacatactgtagtttcacatacacaaaatgatttaactatctct acacctctatacacccagactggaatctcaagaacagaaaggtcacattttctaaaacag acttttgctcctattaatacagctaatgatacatctagaatattagctaaagattgctta gagtcatttacagtggctcatccatctcagacatttttatccctgaatacagaattagtt agtaatattagtgggttacctcctagaccagtcattaagttaactgatcaagcttctgct tctttggataaagctgcacaaaaagataatgaacaattttctgataatcagagccctagc aatagtaaaccacagtcttttgtagatagcagtaatattgccatttctgcatgcctctat cctaatgacacggaagcagagttgttagtttctgaggataatcagactgtttggtatgaa tatggttgtgtatga

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