Sorex fumeus (smoky shrew): 130031346 Help Entry 130031346         CDS       T10594                                  Symbol AHDC1 Name (RefSeq) transcription factor Gibbin   KO K22592   AT-hook DNA-binding motif-containing protein 1 Organism sfum  Sorex fumeus (smoky shrew) Brite KEGG Orthology (KO) [BR:sfum00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03036 Chromosome and associated proteins [BR:sfum03036]     130031346 (AHDC1) Chromosome and associated proteins [BR:sfum03036]  Eukaryotic type   Heterochromatin formation proteins    Other heterochromatin formation proteins     130031346 (AHDC1) SSDB OrthologParalogGFIT Motif Pfam:  DUF4683 Motif Other DBs NCBI-GeneID:  130031346 NCBI-ProteinID:  XP_055978552 LinkDB All DBs Position Unknown AA seq 1596 aa AA seqDB search MRVKPQGLVVTSSAVHSSPDYLREPKYYPGGPPTPRPLLPARPPASPPDKAFAHTFSESP RPPPRRDPSTRRPPVLAKGDDPLPPRAARPVSQARCPTPAGDGSSTRRRWDNGRVNLRPV VQLIDIMKDLTRLSQDLQHSGVHLDCGGLRLSRPPAPPPGDLQYSFFSSPSLANSIRSPE ERATPHAKSERPSHPLYEPEPEPRGSPQPGQGHSPGATAAAAGLPPEPEPDGPDYSELAE ADILSELASLTCPEAQLLEAQSLEPPSPEPEPQLLDPQPRFLDPQALEPLGEALELPPLQ PLADPLGLPGLALQALDTLPDSLESQLLDPQALDPLPKLLDVSGRCLEPQQPLGPCPLSE PLRLDLCSPHGPPGPEGHPKYALRRTDRPKILCRRRKAGRGRKADAGPEGRLLPLPMPTG LAATLAEPPPPPPPPPPALPGPGPVPELEPESSQTPVVPTRKSKCRGVRRMVVKMAKIPV SLGRRNKTTYKVSSLSSSLSVEGKELGLRVSAEPTPLLKMKNNGRNVVVVFPPGEMPIIL KRKRGRPPKNLLLGPGKPKEPAVVAAEAATVAAATLAVPEVKKRRRRKQKLASPQPSYAA DANDSKAEYSDVLAKLAFLNRQSQCAGRCSPPRCWTPSEPESVHQAPDTQSISHFLHRVQ GFRRRGGKAGGFGGRGGGHAAKAARCSFSDFFEGIGKKKKVVAVAAAGVGGPGLTELGHP RKRGRGEVDALTGKPKRKRRSRKNGALFPEQVASGPGFGEAGADWAGDKGGGWASHHGHP GGQAGRNCGFQGTEARAFASTGLESGVPGRGSYYSTGAPAGQTELSQERQSLFTGYFRSL LDSDDSSDLLDFALSASRPESRKASGTYAGPPTSALPAQRGLPSFPSRGAKASPVAVGSS GTGTEPSFQPVLPTRQTFPPGRAASYGITPATSDCRAAETFPKLAPPPSAVARSPTTHPP ASTYPPQYSGYGAGQSVFAPAKPFSGQDCANSKDCSFAYGSGNSLPASPSSAHSAGYAPP PTGGPCLPPSKASFFNSSEGTPFSGSAPTPLRCDSRASTVSPGGYMVPKGTTASATSAAS SSSSSFQPSPENCRQFVGASQWPFRQGYGGLDWASEAFSQLYNPGFDCHVSEPNVILDIS NYTPQKVKQQTAVSETFSESSSDSTQFNQPVGGGFRRANSEASSSEGQSSLSSLEKLMMD WNEASSAPGYNWNQSVLFQSSSKPGRGRRKKVDLFEASHLGFPSATSATASGYPSKRSTG PRQPRGGRGGGACSAKKERGGAAAKAKFIPKPQPVNPLFQDSPDLGLDYYSGDSSMSPLP SQSRAFGVGERDPCDFMGPYSMNPSTPSDGTFGQGFHCDSPSLGAPELDGKHFPPLAHPP TVFDAGLQKAYSPTCSPTLGFKEELRPPPTKLTACEPLKHGLPGASLGHTAAAQAHLSCR DLPLGQPHYDSPSCKGTAYWYPPGSAARSPPYEGKVGTGLLADFLGRTEATCLSAPHLGS PPATPKADKEPLEMARLSGPPRGPAVATAGYGCPLLSDLTLSPVPRDSLLPLQDTAYRYP GFMPQAHPGLGGGPKSGFLGPMAEPHPEDTFTVTSL NT seq 4791 nt NT seq  +upstreamnt  +downstreamnt atgcgtgtgaagccccagggcctggtggtgacgtccagtgccgtgcacagctctcctgac tacctccgggagcccaagtactaccccggcggcccccccaccccccggcccctgcttcct gcccggccccccgccagcccacccgataaggccttcgcccacaccttctccgagagcccg cgccctcccccacgccgggaccccagcacccggcgcccgccagtccttgccaaaggagac gacccgctgccccccagggcggcccgcccggtctcacaggcccgctgccccacgcctgcg ggagacggcagtagcacccgacgccgctgggacaacgggcgggtgaacctgcgcccagtg gtgcagctcatcgacatcatgaaggacctgacacggctgtcccaagacctgcagcacagc ggcgtgcacctggactgtgggggcctgcggctcagccgccctccggccccgcctcccggc gacctccagtacagtttcttctcctcccccagcctggccaacagcatccgcagccccgag gagcgggccaccccccacgccaagtccgagcggcccagccacccgctctacgagcccgag ccggagccccggggcagcccccagcccggccaaggccacagtcccggagccacggccgcg gccgccgggctgcccccagagccggagcccgatggccccgattactcagaactggccgaa gcggacatcctcagcgagctggcctccctcacctgccccgaggcccagctgctggaggcc cagtcgctcgagccgccgtctcccgagccggagcctcagctcctggacccccagccccgc tttctggacccacaggctctagagccgcttggggaagctttggagctgccgcccctgcaa cccctcgccgaccccttggggctgccgggcctggctctgcaggccctggacaccctgccc gactccctggagtcgcagctgctggaccctcaggccctcgaccccctgcccaagctgctc gacgtctccggccgctgcctggagccccagcagcccctggggccctgcccactgtccgag cccttgcgtctggacttgtgttcaccccacggccccccagggccagagggtcaccccaag tacgccttgcggcgcactgataggccaaagatcctgtgtcgccggcgcaaagctggacgg gggcgcaaggcagatgccggacccgagggccgcctgctgcccctgcctatgcccacgggg ctggcggccaccctggccgagcccccgccgccgccgccgccaccgcctcctgccctgcca ggccccggcccagtcccagagctagagccggagtcttcccagaccccggtggttcccacc cgcaaaagcaagtgccggggcgtgcggcgcatggtggtgaagatggccaagatcccggtc tcgctggggcggcggaacaagaccacgtacaaggtgtcgtccttgagcagcagcctgagc gtggagggcaaggagctgggcctgcgggtgtccgctgagcccaccccgctgctgaagatg aagaacaacgggcggaacgtggtggtggtcttcccgccgggcgagatgcccatcatcctc aagcggaagcgtggccgccctcccaagaacctgctgctggggcccggcaagcccaaggag ccggccgttgtggccgccgaggccgccacggtggcggccgccaccctggccgtgcccgag gtgaagaaacggcggcggaggaagcagaagctggcgtctccccagccgtcgtacgccgcc gacgccaacgacagcaaggccgagtactccgatgtcctcgccaagctggccttcctgaac cgccagagccagtgtgccgggcgctgctccccgccccgctgctggacgcccagcgagccc gagtctgtgcaccaggcgcccgacacccagagcatctcccacttcctgcaccgtgtgcaa ggcttccggcggcgaggtggcaaggcaggcgggtttggtggccggggagggggccatgcc gccaaggcggcccgctgctccttcagtgacttctttgagggcatcggcaagaagaagaag gtggtggccgtggctgctgctggcgtcgggggtcccggcctcaccgagttggggcacccc cgcaaacggggccgtggggaggtggatgccttgactgggaagcccaagcgcaagaggcgg tcccggaaaaacggggctctgttcccagagcaggtggccagcggcccgggcttcggggag gcaggggcggactgggccggggacaagggtggcggctgggcctctcaccacgggcaccca ggcgggcaggctggccgaaactgcgggttccagggaaccgaggcccgggcctttgcctcc actgggctggagagtggagtccctggccgcggcagctactacagcacgggtgcccccgcg ggccagaccgagctcagccaggagcgccaaagcctcttcaccggctacttccgctcgctg ctggattcggatgactcctccgacctcctggacttcgccctctcggcctctcgccctgag tcccggaaggcgtcgggcacctacgcggggccccccaccagtgccctgcccgcacagcga ggcctgcccagcttcccgagccggggagccaaggccagccccgtggccgtgggcagcagt gggacagggacagagccctccttccagcctgtgctgcccacccgccagaccttcccacca ggccgcgcggcgagctatgggatcacccctgccacgtcagactgccgggcagcagagacc ttcccgaagctggctcccccgccttcggctgtggcccgctctccaaccacccacccgcct gccagcacctacccgcctcagtacagtggctacggggccggacaaagcgtgtttgcccca gctaagcccttctcgggccaggactgcgctaacagcaaagactgcagctttgcctatggc agcggcaacagcctgcctgcctcccccagcagcgcccacagcgctggctatgccccacct cccaccggtggcccctgcctgccaccgagcaaggcctccttcttcaacagctccgagggg acccccttctccggctcagcccccacacccctgcgctgtgacagccgcgccagcaccgtc tcccctggcggctacatggtgcccaagggcaccaccgcctccgccacctccgccgcctcc tcctcctcctcctccttccagccctcgcctgagaactgtcggcagtttgtgggggcttct cagtggcctttccggcagggctatggaggcctggactgggcctcagaggccttcagtcag ctctacaatcccgggttcgactgccacgtcagcgagcccaacgtgattctggatatctcc aactacacgccgcagaaggtgaagcagcagaccgccgtgtctgagaccttctccgagtcc tcctccgacagcacccagttcaatcagcccgtcggcggtggcttccggcgtgccaacagc gaggcctcaagcagtgagggccagtcgagcctgtccagcctggagaaactgatgatggac tggaacgaggcgtcgtccgccccaggctacaactggaaccagagtgtcctcttccagagc agctccaagcctggccggggacggcggaagaaggtggacctgttcgaggcctcccacctg ggcttcccgtcagccacttcggccaccgcctcgggttacccctccaaacggagcacaggg ccccggcagccgagggggggccggggaggaggggcctgctcagccaagaaggagcggggt ggcgcggccgccaaagccaagtttatccccaaaccccagccggtgaacccgctgttccag gacagcccagacctgggcctggactattacagtggggacagcagcatgtcaccgctgccc tcacagtcgagggcctttggcgtgggggagcgagacccctgtgactttatgggaccctac tccatgaacccgtccacaccgtcggacggcacctttggccaaggtttccactgcgactcg cccagtctgggtgccccggagctagatggcaaacatttcccgcccctggcccacccgccc accgtgttcgatgccggcctgcagaaggcctactcgcccacctgctcgcccacactgggc ttcaaggaagaactgcggccgccgcccaccaagctcacggcctgtgagcccctcaaacac gggctcccgggggctagtctaggccacacggctgcagcccaggctcacctgagctgccgg gacctgcccctgggccagccccactacgactcccccagctgcaagggcacagcctactgg tacccaccgggctcggctgcccgcagcccgccctacgaaggcaaggtgggcacggggctg ttggctgacttcctgggcaggacggaggccacgtgcctcagtgccccacacctgggcagc ccaccggccacgcccaaggccgacaaggagccgctggagatggcccgactgtccggccca ccccgaggccctgccgtcgccaccgctggctatggctgcccgctccttagtgacttgacg ctgtccccagtgcccagggactcgctgctgcccctgcaggataccgcctacaggtatccg ggcttcatgccgcaggcgcatcctggccttggcggaggccccaagagcggcttcctgggg cccatggcggaacctcatcccgaggacacattcaccgtcacctccctgtag

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