Sorex fumeus (smoky shrew): 130031374
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Entry
130031374 CDS
T10594
Symbol
SRRM1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum03013
Nucleocytoplasmic transport
sfum03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130031374 (SRRM1)
03015 mRNA surveillance pathway
130031374 (SRRM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfum03019
]
130031374 (SRRM1)
03041 Spliceosome [BR:
sfum03041
]
130031374 (SRRM1)
Messenger RNA biogenesis [BR:
sfum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
130031374 (SRRM1)
Spliceosome [BR:
sfum03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
130031374 (SRRM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
130031374
NCBI-ProteinID:
XP_055978621
LinkDB
All DBs
Position
Unknown
AA seq
919 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEIL
GFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIP
SAFLELKKEEIKQRQIEQEKLASMKKQDEDKDKRDKEEKESSREKRERSRSPRRRKSRSP
SPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELPEPSVKVKEPSVQEATS
TSDILKVPKPEPVPEPKEPSPEKNSKKEKEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRR
RHRSRSRSYSPRRRPSPRRRPSPRRRSPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSS
SSSSSRSRSPPKKPPKRTSSPPRKTRRLSPSTSPPRRRHRPSPPASPPPKTRHSPTPQQS
NRTRKSRVSVSPGRTSGKVTKHKGTEKRESPSPAPKPRKVELSESEEDKGGKMAAADSVQ
QRRQYRRQNQQSSSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKET
SPRMQMGKRWQSPMTKSGSRRRRSPSPPPTRRRRSPSPAPPPRRRRSPTPPPRRRTPSPP
PRRRSPSPRRYSPPIQRRYSPSPPPKRRTTSPPPPPKRRASPSPPPKRRVSHSPPPKQRS
SPVTKRRSPSLSSKHRKGSSPSRSTRDARSPQPNKRHSPSPRPRAPQTSSSPPPVRRGAS
SSPQRRQSPSPSTRPIRRVSRTPEPKKTKKTATPSPQSVRRVSSSRSVSGSPEPAAKKPP
APSSPVQSQSPSTNWSPAVPVKKAKSPTPSPSPARNSDQEGGGKKKKKKKDKKHKKDKKH
KKHKKHKKEKAVAAAAAVPVTPAALAAPTTTSAQEEPEAEPEPKKEIESEAEDNLDDLEK
HLREKALRSMRKAQVSPQS
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggattcttccgcggaacaagtgcagaacaggataatcgattcagcaacaaa
cagaaaaagctactgaagcagctgaaatttgcagaatgcctagaaaaaaaggtggacatg
agcaaagtaaatttggaggttataaagccttggataacaaaacgagtaacagaaatcctt
gggtttgaagatgatgttgtgattgaatttatattcaaccagctggaagtgaagaatcca
gactccaaaatgatgcaaatcaacctgactgggtttttgaatgggaaaaatgctagagaa
tttatgggagagctgtggcccctgctcttaagtgcacaagaaaacatcgctggaatccct
tctgctttcttagaactgaagaaggaagaaataaaacagagacagattgaacaagaaaaa
ttggcatctatgaaaaagcaagatgaagacaaagataagagggataaggaagaaaaagaa
agcagcagagaaaaaagagagaggtcccgaagcccaagaagacgcaaatccagatctcct
tcccctagaagacgatcttcccctgtcaggagagagagaaagcgcagtcattctcgatct
ccccgtcacagaaccaagagccggagtccttcccctgctccagaaaagaaggaaaaaact
ccagagctccctgaaccatcagtgaaagtaaaggaaccttcagtacaagaggccacttct
actagtgacatcctgaaagttcccaagcctgaacctgtaccagaacctaaagagccttct
ccagagaaaaattccaaaaaggaaaaagaaaaggagaagacgcgaccaagatctcggtca
cgatccaaatcaagatctcgaacacgttctcgttctccttctcatactcgaccaagacgg
cgccacagatcccgatcacgatcatactcacctagaaggcggccaagcccaagaaggcgt
ccatctcctcgaagacggtctccaccaagacgaatgccacctccaccacggcatagaaga
agcagatctccagtgagaaggagaaggcgttcatcagcatctttgtctgggagtagctca
tcgtcgtcttcgtctcgttcccggtcaccgccaaagaagcctcctaagaggacatccagc
ccccctcgaaaaactcgtaggttatctccttcaacaagtcctcctaggagaaggcatagg
ccgtcacccccagcaagtccaccgccaaaaactcgtcattccccaacaccccagcagtca
aaccgtacaagaaaaagtcgtgtttctgtctctccagggagaacttcaggtaaagtcaca
aagcataaaggtaccgagaaaagagaatccccttcaccagcacccaagcctcgaaaagtg
gagttatcagagtcagaagaagataaaggtggcaaaatggctgcggcagattctgttcaa
caaagacgccagtaccgaagacagaaccagcagtcttcatctgattctggctcctcatca
tcttcagaagatgagcgacccaagagatcacatgtgaagaatggtgaggtaggcagacga
cggagacattccccttcccggagtgcctctccatcaccaaggaagcgccagaaagagact
tcccctcggatgcagatgggaaagcgatggcaatcgccaatgactaaaagtggtagtaga
cgtaggagaagtccctccccacctcccaccagaagacgacgatctccttctcctgctcct
cctcctagacgtcgcaggtctcccacaccaccaccacgacgaaggactccctctcctccc
ccgcgtcgacgctcaccttccccaagaagatactctcctccaatacagaggagatactct
ccatctccacctccgaaaagaagaacaacttctccccctcctcctcctaaacgaagggca
tctccatctccaccaccaaagcgtcgggtttcccattctccacctcccaaacaaagaagc
tcccctgtcaccaagagacgttcaccttcattgtcgtcaaagcataggaaaggatcttcc
ccaagcagatctacccgggatgcccggtcaccgcaaccaaacaaacggcattcgccctca
ccacggcctcgagctcctcagacttcctctagtcctccgcctgttcgaagaggagcatca
tcatcaccccaaagaaggcagtccccatctccaagtactaggcccattaggagagtctcc
aggactccggaacccaaaaaaacaaaaaagactgccacgccgagccctcagtctgtaagg
agggtttcatcttcccgttctgtctcaggatcccctgagccagcagctaaaaaaccccca
gcaccttcatcccctgtccagtctcagtcaccctctacgaattggtccccggcggtacca
gtcaaaaaggctaaaagcccaacaccaagcccatcaccggcaaggaattcggaccaagaa
ggaggtgggaagaaaaagaagaaaaagaaggataagaaacacaaaaaagataagaagcac
aagaagcacaaaaaacacaagaaagaaaaggctgtagctgcagctgctgcagtccctgta
acccctgcagcccttgctgctcctacaacgacatcagcacaggaagaacctgaagcagag
ccagagcccaagaaggagattgaaagtgaagctgaagataacctggatgacttagaaaag
cacctgcgtgaaaaggccctgagatcaatgcggaaggctcaagtgtccccacagtcttag
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