Sorex fumeus (smoky shrew): 130031377 Help Entry 130031377         CDS       T10594                                  Symbol CROCC Name (RefSeq) rootletin isoform X1   KO K16469   rootletin Organism sfum  Sorex fumeus (smoky shrew) Brite KEGG Orthology (KO) [BR:sfum00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:sfum03037]     130031377 (CROCC) Cilium and associated proteins [BR:sfum03037]  Primary cilia and associated proteins   Other primary cilia associated proteins    130031377 (CROCC) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Rootletin PUMA_CC CENP-F_leu_zip DUF7077 Motif Other DBs NCBI-GeneID:  130031377 NCBI-ProteinID:  XP_055978633 LinkDB All DBs Position Unknown AA seq 2001 aa AA seqDB search MSLGQEGSLEAQLALETVIQTLESSVVGPGQDEGPSVQDPAPGSRSTCLPARIREIVTRN LSPPVSPAPPPAPEMASLLSLQEENQLLQQELSRVEDLLAQSRAERDELAIKYNAVSERL EQAFRLEAGELETQEPRGLVRQSVELRRQLQEEQASYRRKLQAYQEGQQRQAQLVQRLQA KILQYKKKCSEMEQQLLERSTELKQQQLRDTEHSQDLESALIRLEEEQQRSASLAQVNAM LREQLGQASSANQALSEDIRKVTSDWTRSRKELEQREAAWRREEESFNAYFSSEHSRLLQ LWRQVVGVRRLVSEVKMSTERDLLQLGGELARTSRAVQEAGLGLSSGLRLAESRTEAALE KQSLLQARLEEQLRDRELRDKELAQLQVQSDLDKADLNARVSELALTVEHLQKQHLEKDE LNKALTEKLEALEALRLQEQVAVEAEDGEGLQQTLRDLAQAVLSDMESGVQLSGSEHTAE TSEGSLRGLSGARTPSPPRRPSPSRGRSPRRGPSPACSDSSTLALIHSALHKRQLQVQDM RGRYEASQDLLGTVRKQLGDSESERRALEAQLRRLQDETDVAALAHEEARREAKRLQSSL DLLTREKSSLAGSLQAAQKQAEELRQEREKLQAAQEELRRQRGQLEEEREDAAQERARMR RELERSHRQLEQLEGKRSELAKELVEVREALSSTALQRDMLQAEKAEVAEALTKAEAGRV QLELSLTKLRAEEASLRDSLSKMSALNENLAQDKLALNRLIAQLEEEKAAVLGRQRQVEQ EASSAREEQERLQQERLEQEVERQGLEGSLRAAEQAREALEHRLPSLCSERCRLQEQLAQ LSRQLSSREQELEQARRETQQQVEALERSGREKEALAKEQASLTVQLAAAEREGRTLSEE AARLRVEKEALEGSLFEVRQQLAQLEARREQLEADGQALLLAKEALTVELAGLRQQMATV EEKAALDKELLAQKLVQAEREAQASLREQRAAHEEDLQRLQRDKEAAWRELETERAQLQS QLQREQEELLARLEAEKEELSEEITALQQERDEGLLLAESEKQQALSLKESEKTALSEKL MGTRHSLAAISLEMERQKRDAQSRQEQHRSTVNALTAELRDLRAQRDEAAAAHAQELEQL QEQARELGRQRELGAREAEELRKQLQLLEEARDGLRQELLEAQRRARESLDSCEAQRQGA AGLRRSLAEGAQEREALRRSNEELRAAVKKAESERISLKLAKEDKEQKLVLLEEARAAAG KEAGELRAALQEVERSRLEARRELQELRRQMKVMDSENARQARELADLQGRLALGERAEK EGRREALDLRQRLLKGEASVEAMRQELQGAQRKLQEQESEFRARERGLLGSLEEVRGAEK QQLDHTRHLELKLETARAEVAELGLRLSAAEGRAQGLEAELARVEVQRRAAEAQLGSLRS ALRRGLGLGRVPSPAPVPSPGSPARGLPAGGSGDVLGSPSPLERSPGSQPPSPGPVLSPG SSDLDPEAVRGALQEFVQELRTAQRERDELRTQAGALSRQLAETEAERDGATSRARQLQK AVAESEEARRSVDGRLSGAQAELALQEESVRRSERERRAALDQVTALQRSLQAAESELRS QQDKVSKLKASEGKLESDKRRLKEVLDACESRSIKLELQRRSLEGELQRSRRGLSDREAQ AQALQERVESLQRQVADGEVKAETLQLTVGRLSGALAKVEESEGTLRDKVKGLTDALAQN SASLTSTQDKNLQLQKTLTACEHDRQVLQERLEAAKQALSEARKQSGHLGEQVQAMRAEL ADLELQRAEAEGQRQQLQEALRQRQEGEAAALHTAQKLQERVGSLQRTLAQLEAEKRELE RSALRLEKDRAALRRTLDKVEQEKLRSHEGTLRLSAEKGRLDRTLSGAELELAEAQKQIQ LLEAQVEVLEQNHSPAQLELQQEVERLRSAQVQTERTLESRERAHRQRVRGLEEQVSTLK GQLQQELRRSSAPFSSGPAEK NT seq 6006 nt NT seq  +upstreamnt  +downstreamnt atgagtttgggacaggaggggtcgttggaagcccagctggcactggagacagtcattcag accctggagagcagcgtcgtggggccgggtcaggacgagggcccgagcgtgcaggacccg gccccaggctctcggtccacgtgcctgcccgcccgcatcagggaaatcgtcacccgcaac ctctccccgcccgtgagcccagccccaccgcccgccccggagatggcatccttgctgtcc ctgcaggaagagaaccagctgctgcagcaggagctgtcccgtgtggaggacctgctggcc cagagccgagcggagcgcgatgagctggccatcaagtacaacgccgtcagcgagaggctg gaacaggctttccgactggaggccggggagctggagacgcaggagccgcgggggctggtg cggcagagcgtggagctgcggaggcagctgcaggaggagcaggcgtcctaccggcgcaag ctgcaggcctatcaggagggccagcagcggcaggcgcagctcgtgcagcggctgcaggcc aagatcctccaatacaagaagaagtgctcagagatggagcagcagcttctggagagatcc acggagctgaagcagcagcagctgcgggacaccgagcacagccaagacctggagagcgcc ctcatccgcctggaggaggaacagcagaggagtgccagcctggcccaggtgaacgccatg cttcgagagcagctgggccaggccagctcggccaaccaggctctgagcgaggacattcgc aaggtgaccagtgactggacacgcagccgcaaggagctggagcagagggaggcagcgtgg aggcgcgaggaggagtccttcaacgcctacttcagcagtgagcacagccgccttctgcaa ctgtggaggcaggtggtgggagtccggcggctggtcagcgaggtgaagatgtccaccgag agggacctgctgcagctggggggagagctggcccgcacctcccgcgccgtgcaggaggcc ggcctggggctgagctctggcctgcggctggcggagagccgcaccgaggcggccctggag aaacagagcctgctgcaggcccggctggaggagcagctccgggacagggagctccgggac aaggagctggcccagctgcaggtgcagagcgacctggacaaggctgacctcaatgccaga gtgtccgagctggccctgacggtggagcatcttcagaaacagcatctggagaaggatgag ctcaacaaagccctcacggagaagctggaggctctggaagcgctacggctccaggagcag gtggctgtggaggcggaggacggtgaggggctgcagcagaccctccgggacctggcgcag gccgtcctgtcggacatggagagcggggtccagctcagtggctccgagcacacggccgag acgtccgagggcagcctgcgggggctctcaggcgcgcggaccccgtccccgccacggcgg ccctcacccagccggggccggtccccacggcgaggcccgtcccccgcctgctccgactcc tccacgctcgccctcatccactctgccctgcataagcgccagctgcaggtccaggacatg cgggggcgctatgaggccagccaggacctgctgggcaccgtgcggaagcagctcggggac agcgagagcgagcgccgggcgctggaggcgcagctgcggcggctgcaggacgagaccgac gtggccgcactcgcccacgaggaggcgcggcgggaggccaagcggctgcagagttccctg gacctcctgaccagggagaagagcagcctggccggcagcctgcaggcggcgcagaagcag gcggaggagctgcggcaggagcgcgagaagctgcaggctgcccaggaagagctgcggcgg cagcggggccagctggaggaggagcgggaggacgccgcccaggagcgggcgcgcatgcgc agggagctggagcgcagccacagacagctggagcagctggaggggaagcgctcggagctg gccaaggagctggtggaggtgcgggaggcgctgagctccaccgcgctccagcgggacatg ctgcaggccgagaaggccgaagtggctgaggcgctgaccaaggcggaggcgggccgcgtg cagctggaactctcgctgaccaagcttcgggccgaggaggcctctctgcgggattccttg tccaagatgagcgcgctcaacgagaacctcgcacaggacaagctggctctgaaccgcctc atcgcccagctggaagaggaaaaggcagcggtgctgggccggcagcggcaggtggagcag gaggccagctcggcgcgggaggagcaggagcggctgcagcaggagcggctggagcaggag gtggagcggcagggcctggagggctccctgcgggcggcggagcaggcgcgagaggccctg gagcaccggctcccctcgctgtgctcggagcgctgcaggctgcaggagcagctggcccag ctctcccggcagctgagcagtcgggagcaggagctggagcaggcgcggcgggagacccag cagcaggtggaggcgctggagcgctcgggccgggagaaggaggcgctggccaaggagcag gccagcctgacggtgcagctggccgccgccgagcgggagggccggaccctgtccgaggag gccgcacgcctgcgcgtggagaaggaggcgctggagggcagcttgttcgaggtgcggcag cagctggcccagctcgaggcccggcgggagcagctggaggcagatggacaggccctgctc ctggccaaggaggccctgaccgtggagctggcgggcctgcggcagcagatggcaacagtg gaggagaaggcagcgctggacaaggagctcctggcccagaagctggtgcaggccgagcgg gaggcccaggcctcgctccgggagcagcgggcggctcacgaggaagacttgcagcggctg cagcgagacaaggaggcggcctggcgggagctggagacggagcgggcccagctgcagagc cagctgcagcgggagcaggaggagctgctggcccggctggaggccgagaaggaggagctg agcgaggagatcacagctctgcagcaggagcgggacgagggtctcctcctggccgagagc gagaagcagcaggccctgtccctgaaggagtcggagaagacggcgctgtcagagaagttg atggggacccgccacagcctggccgctatctccctggagatggagcggcagaagcgggac gcgcagagcaggcaggagcagcaccggagcaccgtgaacgccctgacggccgagctgcgg gacctgcgtgcccagcgggacgaggcggcggcggcgcacgcgcaggagctggagcagctg caggagcaggcccgggagctgggccggcagcgggagctgggcgcgcgcgaggcagaagag ctccggaagcagctgcagcttctggaggaggcccgggatggactgcgtcaggagctgttg gaggcgcagcggcgggcgcgggagagcctggacagctgcgaggcccagcggcagggcgcg gccggcctgcggcgcagcctagctgagggtgcccaggagcgtgaggccctgcgcaggtcc aacgaggagctgcgggcggccgtgaagaaggctgagagcgagcgcatcagcctgaagcta gccaaggaggacaaggagcagaagctggtgctactggaggaggcgcgggcagccgcgggc aaggaggccggggagctgcgggctgcactgcaggaagtggagcgttcacgattggaggcc cgcagggagctgcaggaactccggcgccagatgaaggtgatggacagcgagaacgccagg caggcacgagagctggccgacctgcagggccgcctggcgctgggcgagcgggcagagaag gagggccggcgggaggccctggacctgcggcagcgtctgctgaagggcgaggccagtgtg gaggccatgcggcaggagctccagggagctcagcgcaagctgcaggaacaagagagtgag ttccgggcccgggagcgaggcctgctgggctccctggaggaggtgcgcggtgccgagaag cagcagctggaccacacccgccacctggagctgaagctggagacggcgcgggccgaggtg gccgagctgggcttgcggttgagtgcagctgagggccgggcgcagggcctggaggcggag ctggcccgagtggaggtgcagcggcgtgcagccgaggcccagctgggcagcctgcgctcg gccctgcgccggggcctgggccttggccgggtgcccagccctgccccagtgcccagcccc gggtcccctgcccggggcttgccagctggaggaagtggagacgtgcttggcagccccagc cccctggaacgcagtccagggtcccagccaccatccccgggacctgtcctctccccgggg tcttcagacctggacccggaggcggtgcggggagccctccaggaattcgtgcaggagctg cggactgcccagagggagcgggatgagctccggactcaggcgggtgccctgagtcgccag ctggccgagacggaggccgagagggacggcgccacgtcccgggcgaggcagctgcagaag gccgtggccgagagtgaggaagcgcggcgctctgtggacgggcggctgagtggcgcccag gcggagctggccctgcaggaggagagcgtgaggcgcagcgagcgtgagcgccgggctgcg ctggaccaggtgaccgcgctgcagaggagtctgcaggctgctgagagcgagctccggtcc cagcaggataaggtcagcaagctgaaggccagcgagggcaagctggagagcgacaagcgg cggctgaaggaggtgctggacgcttgcgagagccgcagcatcaagctggaactgcagcgg cgctcgctggagggggaactgcagcgtagccggcggggcctgagcgaccgcgaggcccag gcccaggccctgcaggagcgcgtggagtctctgcagagacaggtagcagacggtgaggtg aaggcagagaccctgcagctgacggtggggcggctgagcggggccctggccaaggtggag gagagtgaggggaccctgcgtgacaaggtgaagggactgacggacgccctggcccagaac agcgccagcctcaccagcactcaggacaagaatctgcagctgcagaagacgctgaccgcc tgtgaacatgaccgccaggtgctccaggagcggctggaggccgcgaagcaggcgctgtcc gaggctcggaagcagagcggccacctgggcgagcaggtgcaggccatgcgggccgagctg gccgacctggagctgcagcgggccgaggccgagggccagcggcagcagctgcaggaggca ctgcggcagcggcaggagggcgaggcggcggccctgcacaccgcgcagaagctgcaggag cgtgtgggcagcctgcaacgcacgctggcgcagctggaggccgagaagcgggagctggag cggtcagccctgcggctggagaaggaccgggcggccctcaggaggaccctggacaaggtg gagcaggagaagctccgtagccacgagggcaccctacggctgagcgcggagaagggacgg ctggaccgcacgctctctggggcggagctggagctggccgaggcccagaagcagatccag ctgctggaggcccaggtggaggtgctggagcagaaccacagcccggcccagctggagctg cagcaggaggtggagcgtctgcgcagtgcccaggtgcagacggagcgcacgctggagtcg cgggagcgggcccaccggcagagggtgcgcgggctggaggagcaggtgtccacgctgaag gggcagctgcagcaggaacttcggaggagctcggcgcccttctcttccggccccgcggag aaatga

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