Sorex fumeus (smoky shrew): 130031496
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Entry
130031496 CDS
T10594
Name
(RefSeq) LOW QUALITY PROTEIN: guanylate-binding protein 4-like
KO
K20899
guanylate-binding protein 1/3/4/7
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
130031496
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GFIT
Motif
Pfam:
GBP
GBP_C
RHD3_GTPase
MMR_HSR1
UPF0302
AAA_18
Motif
Other DBs
NCBI-GeneID:
130031496
NCBI-ProteinID:
XP_055978819
LinkDB
All DBs
Position
Unknown
AA seq
679 aa
AA seq
DB search
MSKGPIMKDPICLVENYKNDLRVNRKALNILETISQPVVVVAITGLCRTGKSYLMNRLAG
HNRGFQLGCTVKAETKGIWMWCVPHPSKIDHTLILLDTEGLGDVEKGDSRNDSWIFALAV
LLSSVLVYNSIGTINYQVLEQLHXHSNYVVELAELIRTKSCPSTEELNDSVEFVTFFPDF
IWALRDFKLKLESKGQSITEDEYLENALKLVEGEDSKIKRSNDSKHSIRMFFPKRKCFVF
KQPTKDDDLLLNLEEASEHQLESIFQDQCQNFCSYIFTNARPKTLKGGIIIKGSGLAVLV
DSYVNAINVGEVPCLENSVALLAQQENAMAVQKAVDHYSEQVTQQVQFPTESLQDLLDVH
AACEREAFAIFMEHSFKDNKRKFQTELLSMIEEKKEAFLLQNEEASFKHCEDELRKISRT
LMESISKGIFFVPGGHSLYLAAKNKVEQDYALVPKKGVKSMEVLQGFLQSQESTEQAILH
ADKSLTNAEKRIAVEQAQNQASKKKMDLVRKRNKMEEQKAKALENTLKENLIQVKKKLEE
EMEIKLKELKIILEHLLKNQEKLRTEGFTNKSEEMNRTINQVEENITSIQNNWLKELKSM
PGMCEAHSYLWYHSLMAPTLGETRPWAARLDPSIEPSVLHSHADSLWGELKEVNTKHVLL
PQATEEDTPEVNLVHKTCG
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagggacctatcatgaaggaccccatctgtctggtggaaaactacaaaaatgat
ctgagagtaaatcgcaaagcactgaatattcttgagactatatctcagccagtggtggtg
gtggccattacagggctatgtaggacaggtaaatcctacctaatgaaccgcctggctgga
cataaccgtggtttccagctgggttgcacagtgaaggctgaaactaagggcatctggatg
tggtgtgtacctcatccctccaagatagaccacaccctgatacttctggacactgagggc
ctgggcgatgtggaaaagggtgactccagaaatgactcttggatctttgcactggccgtt
cttctgagcagtgtattagtctacaacagcataggaaccatcaactaccaagtcttggaa
cagctacactaacattccaactacgtagttgaattagcagaactaatcagaacaaagtct
tgtccaagtactgaagaattaaatgattcagtggagtttgtgactttctttccagacttt
atttgggctttacgggatttcaagttgaagttggagtcaaaaggacagagtatcactgaa
gatgagtacctggagaatgcgttgaaattggttgaaggtgaggattcaaaaattaaacgt
tccaatgactctaaacattctatcaggatgttctttcccaaaaggaaatgctttgttttt
aaacaacccacaaaagatgatgatctattgctcaatcttgaggaagcatcagaacaccaa
ttggaatcaattttccaggaccaatgccaaaatttctgttcttatatcttcacaaatgca
agacccaagaccctaaaaggtggaatcattatcaaaggcagtggactggctgttctggtt
gattcctatgtgaatgctatcaatgttggggaagttccttgtttggaaaattcagtggca
ctcctggcccagcaggagaatgcaatggctgtgcagaaggcagttgaccactacagtgag
caggtgacgcagcaagtgcagttccccacagaatcacttcaggacctgctagatgtgcat
gcagcctgtgagagagaggcctttgcaatttttatggagcactcctttaaggataacaaa
aggaagttccagacagagcttttgagcatgatagaggaaaaaaaagaggccttcttgctt
caaaatgaggaggcatctttcaaacactgcgaggatgaacttagaaagatttcaagaact
ctgatggaaagtatttcaaaaggaattttctttgtacctggaggacacagtctctactta
gcagcgaagaacaaagttgagcaggactatgcattggtacccaaaaaaggagttaagtca
atggaggtcctccagggcttcttgcaatctcaagaatcaacagagcaagccatccttcac
gcagacaaatccctcaccaatgcagagaaacgtatagcagttgaacaggcccaaaatcaa
gcatctaagaagaaaatggatctggtgagaaagagaaataaaatggaggagcaaaaagca
aaggctctagaaaatactctgaaggaaaacctaatccaagtgaagaagaaattggaggaa
gaaatggaaataaaattgaaagagctgaaaataattctggaacacttgctgaagaatcaa
gaaaaactacgtactgaagggtttacaaataagtctgaagaaatgaataggactataaat
caagtagaagaaaatattacaagcatccaaaataattggcttaaagaactgaagtccatg
cctggcatgtgtgaggcccatagttatctctggtaccacagcctgatggccccaacactg
ggcgagaccagaccctgggctgcacgactagacccaagcattgaaccatctgttctgcac
agtcatgcagatagtttatggggagagctgaaagaagtcaacacaaaacatgtgctgttg
ccccaggccacagaggaagacactccagaagtaaaccttgtccataagacctgtggttga
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