Sorex fumeus (smoky shrew): 130031807
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Entry
130031807 CDS
T10594
Symbol
SOX11
Name
(RefSeq) transcription factor SOX-11
KO
K09268
transcription factor SOX11/12 (SOX group C)
Organism
sfum Sorex fumeus (smoky shrew)
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfum03000
]
130031807 (SOX11)
Transcription factors [BR:
sfum03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
130031807 (SOX11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
130031807
NCBI-ProteinID:
XP_055979292
LinkDB
All DBs
Position
Unknown
AA seq
464 aa
AA seq
DB search
MVQQAESLEAESNLPREALDTEEGEFMACSPVALDESDPDWCKTASGHIKRPMNAFMVWS
KIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKHMADYPDYKYRP
RKKPKMDPSAKPSASQSPEKSAAGGGGGGGGGGGASGGAGGAKTSKSSTKKCGKLKAPAA
PAAAGAKAGAGKATQAGDFGGAGEDYVLGSLRVSSGAGGGGPGKTVKCVFLDEDDEDEED
DDELQLRIKQEADEDDDDPPHQQLLQPPGQQQPPQLLRRYNVAKVPASPTLSSSAESPEG
ASLYDEVRAGAPSGSGSGSRLYYSFKNITKQHPPPLAQPALSPASSRSVSTSSSSSSSSS
GSSSSGSSSSSSSSSSGGEDADDLMFDLSLNFSQSAHSASEQQLGGSAAAGNLSLSLVDK
DLDSFSEGSLGSHFEFPDYCTPELSEMIAGDWLEANFSDLVFTY
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagcaagcggagagcttggaagcggagagcaacctgccccgggaggctctggac
acggaggagggcgaattcatggcttgcagcccggtggccctggacgagagcgacccggac
tggtgcaagacggcgtcgggccacatcaagcggccgatgaacgcgttcatggtgtggtcc
aagatcgagcgcaggaagatcatggagcagtctccggacatgcataacgccgagatctcc
aagaggctgggcaagcggtggaaaatgctgaaggacagcgagaagatcccgttcatccga
gaggcggagcggctgcggctcaagcacatggccgactatcccgactacaagtaccggccc
cggaaaaagcccaaaatggacccctcggccaagcccagcgccagccagagccccgagaag
agcgcggcgggcggcggcggcggcggcggcggcggcgggggtgcgagcggcggcgcgggt
ggcgccaagacctccaagagctccaccaagaaatgcggcaagctcaaggcccccgccgcc
cccgcggccgccggcgccaaggccggcgcgggcaaagcgactcaggcgggggacttcggg
ggcgcgggcgaagactacgtgctcggcagcctgcgcgtgagcagcggcgcgggcggcggc
ggccccggcaagacggtcaagtgcgtgttcctggacgaggacgacgaggacgaggaagac
gacgacgagctgcagctgcggatcaagcaggaggcggacgaggacgacgacgacccgccg
caccagcagctcctgcagccgccgggccagcagcagccgccgcagctgctgagacgctac
aacgtcgccaaagtccccgccagccccacgctgagcagctcggccgagtcccccgagggc
gcgagcctctacgacgaggtgcgggccggcgccccctcgggctcggggagcgggagccgc
ctctactacagcttcaagaacatcaccaagcagcatccgccaccgctcgcgcagcccgcg
ctgtcgcccgcgtcctcgcgctccgtctccacctcttcgtcctcctcgtccagcagcagc
ggcagcagcagcagcggcagtagcagcagcagcagcagcagcagcagcggcggcgaggac
gccgacgacctgatgttcgacctgagcttgaatttctcccaaagcgcgcacagcgccagc
gagcagcagctggggggcagcgcggcggccgggaacctgtccctttctctagtggataag
gatttggattcgttcagcgagggcagcctgggctcccacttcgagttccccgactactgc
acgcccgagctgagcgagatgatcgcaggggactggctggaggcgaacttctctgatctg
gtgttcacgtattga
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