Sorex fumeus (smoky shrew): 130031816
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Entry
130031816 CDS
T10594
Symbol
HMGCL
Name
(RefSeq) hydroxymethylglutaryl-CoA lyase, mitochondrial isoform X1
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum00280
Valine, leucine and isoleucine degradation
sfum00650
Butanoate metabolism
sfum01100
Metabolic pathways
sfum04146
Peroxisome
Module
sfum_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
130031816 (HMGCL)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
130031816 (HMGCL)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
130031816 (HMGCL)
Enzymes [BR:
sfum01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
130031816 (HMGCL)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-GeneID:
130031816
NCBI-ProteinID:
XP_055979299
LinkDB
All DBs
Position
Unknown
AA seq
325 aa
AA seq
DB search
MATVRKALPRRLAGLTSLRAVNISSMSAFPSRVKIVEVGPRDGLQNEKNIVPTAVKIKLI
DMLSEAGLPVIEATSFVSPKWVPQMADNAEVFKGIQKFPGINYPVLTPNFKGFQAAVAAG
AKEVSIFGAASELFTKKNINCSIDESLQRFDEILKAAQGANILVRGYVSCVLGCPYEGKI
APAKVAEVSKKLYSMGCYEISLGDTIGVGTPGIMKDMLSAVMQEVPVTALAVHCHDTYGQ
ALANTLMALQMGVTVVDASVAGLGGCPYAQGASGNLATEDLVYMLTGLGIQTGVNLQKLQ
EAGTFICQALNRKTSSKVSQATCKL
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggcgactgtgaggaaggcgctgccgcggaggctggcgggcttgacgtccctccgggct
gtcaacatttcatctatgagtgcttttcccagccgggtgaaaatcgtggaagttggtccc
cgagatggactacaaaatgaaaagaatattgtacctactgcagtgaaaatcaagcttata
gacatgctttctgaagctggactacccgttatagaagccacgagctttgtgtctcccaag
tgggtgcctcagatggctgacaatgctgaagtctttaagggcatccagaaatttcctggc
atcaattacccagtcctgaccccaaatttcaaaggcttccaggcggcggttgctgctgga
gccaaggaagtgagcatctttggagctgcctcagagctctttactaagaagaacatcaac
tgctctattgatgagagtttgcagcggttcgatgaaatcctgaaagcagctcagggagcc
aatatccttgtacgcggttatgtctcctgcgtgcttggatgcccctatgaagggaagatc
gcccctgctaaagtagctgaggtctccaagaagttgtactcaatgggctgctatgagatc
tccctaggcgacactatcggcgtgggcacacctggcatcatgaaggacatgctgtctgct
gtcatgcaggaagtgccagtgactgcccttgctgtccactgccatgatacctatggccag
gccctggccaacaccttgatggccctgcagatgggtgtgactgttgtggacgcttctgta
gctggacttggaggctgtccatatgcacaaggggcttcaggaaacttggccacggaggac
cttgtctacatgctcactggtttgggcattcaaacgggtgtgaacctccagaagctccaa
gaagctgggacctttatttgtcaagccttgaacagaaaaaccagctctaaagtgtctcaa
gctacctgtaaactgtga
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