Sorex fumeus (smoky shrew): 130032062
Help
Entry
130032062 CDS
T10594
Symbol
BCAN
Name
(RefSeq) brevican core protein
KO
K06795
brevican
Organism
sfum Sorex fumeus (smoky shrew)
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
sfum00535
]
130032062 (BCAN)
00536 Glycosaminoglycan binding proteins [BR:
sfum00536
]
130032062 (BCAN)
04091 Lectins [BR:
sfum04091
]
130032062 (BCAN)
Proteoglycans [BR:
sfum00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
130032062 (BCAN)
Glycosaminoglycan binding proteins [BR:
sfum00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
130032062 (BCAN)
Lectins [BR:
sfum04091
]
C-Type lectins
Lecticans
130032062 (BCAN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Xlink
Lectin_C
V-set
EGF
Sushi
hEGF
ig
Ig_2
I-set
Izumo-Ig
EGF_3
Motif
Other DBs
NCBI-GeneID:
130032062
NCBI-ProteinID:
XP_055979631
LinkDB
All DBs
Position
Unknown
AA seq
899 aa
AA seq
DB search
MAPGLLCLLATLALAPLPAAFTDTLEDSSEDRAFRVRIAGPAPLRGVLGGALTIPCHVHI
LRQSTSRPAPGLPRVKWTFLAGGREAEVLVARGLRVKVSEAYRFRVALPAYPASLTDVSL
VLSELRPNDSGIYRCEVQHGIDDSSDAVEVKVKGVVFLYREGSARYAFSFPAAQEACSRI
GARIATPEQLYAAYLGGYEQCDAGWLADQTVRYPIQTPREACYGDMDGFPGVRNYGLVDP
QDLYDVYCYAEDLNGELFLGAPEDKLTLEEAREYCRERGAEIATTGQLYAAWDDGLDRCS
PGWLADGSVRYPIVTPSQRCGGGLPGVKTLFLFPNQTGFPNKHSRYNVYCFRDSAQPSAL
PEAPSLDPDALETIITVTETLKELQLPPEAMESESRGAIYSIPIPEDGAGGSSTLEDPAE
APRTLEFESQSLAPPTGSSEEEGRTLKDEEEYKEEEEDVEDEALWTWPGEPSSPDPRVPV
PTKQPPEEWLSQASLPTGARATFQPGASPPPSQQPETEPPRVLGPPLAILPTPRRGNLAS
PAPSTPAGASEGVQAGAPELSGLPRGEGEEAGSSEDALSLPPATRAPEGARELEGPSEEN
SGRTVPAGSNGQTQPVLPTDSGSRGGAAVAPSSGDCVPSPCHNGGTCLEEDEGVRCICLP
GYGGHLCDVGLRSCSPGWDAFQGACYKHFSTRRSWEEAESQCRQHGAHLASISTPEEQDF
INNRYREYQWIGLNDRIIEGDFLWSDGVPLLYENWHPGQPDSYFLSGENCVVMVWHDEGQ
WSDVPCNYHLSYTCKMGLVSCGPPPELPLALVFGRPQLRYEVDTVLRYQCQEGLAQRNLP
LIRCQEDGHWETPQISCVPRGHARSLPPFKAPESKQKKPLGRWKVPLTPPSRLPLRPWG
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atggccccagggctcctgtgcctgctggccacgctggccctggctccactccctgccgcc
ttcactgacacactggaagacagctcagaggaccgcgcgttccgcgtgcgcatcgccggc
cctgcgccgctgcggggtgtgctgggcggcgccctaaccatcccgtgccacgtacacatc
ctgcgtcagtccaccagccgcccggccccgggcctgccgcgggtcaagtggacgttcctg
gcgggcggccgcgaggccgaggtgctggtggcgcgcgggctgcgcgtgaaggtgagcgag
gcctaccgcttccgcgtggcgctgcccgcctaccccgcgtccctcaccgacgtctccctg
gtgctgagcgagctgcggcccaacgactcgggcatctaccgctgcgaggtccagcatggc
atcgacgacagcagcgacgccgtggaggtcaaagtcaaaggggtcgtcttcctctaccgc
gagggctccgcccgctacgccttctccttccccgcggcgcaggaagcctgctcccgcatc
ggagcccgcatcgccacccccgagcagctgtacgccgcctatctggggggctacgagcag
tgcgatgcgggctggctggccgaccagaccgtcaggtaccccatccagacgccacgagag
gcttgttatggagacatggatggtttccctggggtccgcaactatgggctggtggacccc
caagacctctatgatgtctactgctatgccgaggacctaaatggagagctgttcctgggg
gcacctgaggacaagctgaccctggaggaggcgcgagagtactgccgggagcggggcgca
gagatcgccaccacgggtcagctgtatgcagcctgggatgatggcctggaccgctgcagc
ccgggctggctggctgacggcagtgtgcgctaccccatcgtcacgcccagccagcgctgt
ggcgggggcctgcccggggtcaagacgctcttcctcttccccaaccagactggcttcccc
aacaagcacagccgctacaacgtctactgtttccgagactctgcccagccctctgccctc
cccgaggcacccagcctggaccctgatgcactggagaccattatcactgtgaccgagacc
ctgaaggagctgcagctgcccccagaggccatggagagtgaatcccgtggcgccatctac
tccatccctatccccgaggatggggcaggtgggagctccacgctggaagaccccgcagag
gcccctaggacactagagtttgaaagtcaatccctggcacctcccacggggtcttcagaa
gaggaaggccgaactctcaaggatgaagaggagtacaaggaggaagaggaggatgtggag
gacgaggctttgtggacctggcctggggagcccagcagcccggaccccagggtccccgtt
cccaccaagcagccccccgaggagtggctgtcccaggcttccctgccaaccggggccaga
gcaactttccagcccggcgcctcaccacctcctagccaacagccagagacggagcccccg
agggtcctgggaccacccctggcgatcctgcccactcccaggagggggaacctggcctcc
ccagcgccttctaccccagctggggctagcgagggggtgcaggcgggtgctcctgagctt
tctgggctccccagaggagagggtgaagaggcaggaagctccgaggatgccctgtccctg
cctcccgccacgcgggcccctgaaggtgccagggagctggagggtccctctgaagagaat
tctggaaggacagtcccagcagggagcaacgggcagacccagccagtgctgcccacggac
agcggcagccggggcggagcggccgtggccccctcgtcaggtgactgtgtccccagcccc
tgccacaatggtggtacatgcttggaggaggatgagggggtccgctgcatatgcttgcct
ggctatggggggcacctgtgcgatgttggcctccgctcctgcagccccggctgggacgcc
ttccagggcgcctgctacaagcacttttccacgcggcggagttgggaggaggcagagagc
cagtgccggcaacacggcgcgcacctggccagcatcagcacgcccgaggagcaggacttc
atcaacaatcgataccgagaataccagtggatcggactcaacgacaggatcatcgaaggc
gatttcctgtggtcagatggagtacccctgctttatgagaactggcaccctggacagccc
gatagctacttcctgtccggcgagaactgcgtggtcatggtgtggcatgatgagggccag
tggagtgacgtgccctgcaactaccacctgtcctacacctgcaagatggggctggtgtcc
tgcgggccgcccccagagctgcccctggccctagtcttcggccgcccacagctacgctac
gaggtggacacggtgctgcgttaccagtgccaggaggggctggcccagcgcaacctgccg
ctgatccgctgccaggaggatgggcactgggagactccccagatctcctgtgtgccgcgc
ggccatgcccgatcactgccccctttcaaggccccagaaagcaaacagaagaagccactg
gggcgctggaaggtgccgctgacccctccttcccgtttgcctctgaggccctggggatga
DBGET
integrated database retrieval system
