Sorex fumeus (smoky shrew): 130032146
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Entry
130032146 CDS
T10594
Symbol
SEMA6C
Name
(RefSeq) semaphorin-6C isoform X1
KO
K06842
semaphorin 6
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
130032146 (SEMA6C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
130032146
NCBI-ProteinID:
XP_055980053
LinkDB
All DBs
Position
Unknown
AA seq
909 aa
AA seq
DB search
MPRASCFLPLLLLLFSLPHPQAAFPQDPLPLLTSDLQGTSPLAWFRGLEEDDVVADLGLD
FQRFLTLNRTLLVAARDHVFSFDLQAQEGEGLVPSKYLTWRSQDVENCAVRGKLTDECYN
YIRVLVPWNSRTLLACGTNSFSPVCRSYGITSLQQEGEELSGQARCPFDATQSNVAVFAE
GSLYSATAADFQASDAVVYRSLGPQPPLRSAKYDSKWLREPHFVHALEHGDHVYFFFREV
SVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVLQAL
TGPGNLHGHPAFFGVFTTQTNSIPGSAVCAFYLADVERGFEGRFKEQRSVDGAWTTVSED
RVPSPRPGSCAGLGRAASFSSSRDLPDDVLTFIKAHPLLDPAVPPATQQPLLTLTSRALL
TQVAVDGTAGPYGNTTVLFLGSNDGTVLKVLPPGGPQGRHQPVLLEEINAYSPSRCGGKR
AAQLARRVIGLELDTEGHRLFVAFSGCIIYLPLSRCSQHGACRRSCLASQDPYCAWQSAH
GCVDIRGPAGTQAALAGSQEPVELGDCQDGATGSQSGAGDSAYGVRRDVPAAPAASAVPV
PLLLASVAAAFALGASVSGLLVSCVCRRTHRRRSKDVETPGLPRALSLRSLARLHGPEPP
PPPKDADGAQTPQLYTTFLPPPDAAPPPELACLPTPESTPELPARHLQPAGGAWEWNQNG
NNAKEGPGRARGAHAAGGPAPRVLVRPPPPGCPGQAVEVTTLEELLRYLHGPQSPGPCAP
APAPAAPGPGLLPRDRAPPVRLDVPPDGQCAAPSGRPAPAPRLGVAGGRRPPFPAHRTPP
ALLTRVPSGAPSRCSGATDRPLLYLGRPESYRGRALKRVDLEKPPLPPKSSLGGSPPQAA
VAGGGHLDF
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atgccccgtgcctcctgcttcctgcccttgctactgctgctgttctcactgccgcatccc
caggctgcatttccccaggacccccttccgctgctgacctctgacctgcaaggaacctcg
cccttagcctggttccggggcttggaggaggatgatgtggtcgcagatcttgggctggac
ttccagagattcctgaccttgaaccggaccctgctggtggctgcccgggaccatgttttc
tccttcgatcttcaggcccaagaaggggaggggctggtgcccagcaagtatctgacgtgg
cggagccaggatgtggagaactgtgccgtccgggggaagctgacggatgagtgctacaac
tacatccgggtccttgttccctggaactctcgcacactcctggcctgcggcaccaactcc
ttcagccctgtgtgccgcagctacgggatcacgtctctgcagcaggagggcgaggagctg
agtggccaggcccggtgccccttcgatgccacccagtccaatgtggctgtctttgccgag
ggcagcctctactcagccacggcggccgatttccaggccagcgacgcggtggtgtacaga
agccttgggcctcagccgcctctccgctccgccaagtacgactccaagtggctccgagag
cctcactttgtccacgccttggagcacggagaccatgtgtacttcttcttccgagaggtg
tctgtggaggacgcccggctggggcgggtgcagttctcccgggtggctcgtgtctgcaag
cgcgacatgggcggctcccctcgggccctggaccgccactggacatccttcctgaagctt
cggctcaactgctcggtccctggggactccaccttctatttcgacgttctacaggccttg
acggggcctgggaacttgcatggccaccctgccttctttggggtcttcaccacgcagacc
aatagcatccccggctccgctgtctgcgccttttacctggctgatgttgaacgtgggttt
gagggccggttcaaggagcaaaggagcgtggatggggcctggactaccgtgtctgaagac
agggtcccctcccccaggcctggctcctgtgcagggcttggccgggcggcctcgttctct
tcttcccgagacctccctgatgacgtcctgactttcatcaaggcccacccgctgctagac
cctgccgtgccccctgccacccaacagcctctgctgactcttaccagcagggccctgctg
acccaggtggctgtggatggcactgcagggccctatgggaacaccacggtcctgttcctt
ggctccaacgacgggacggtgctgaaggtgctgcctcctgggggcccccaggggagacac
cagccagtcctgctggaagagatcaacgcctacagcccctcccggtgcggtggcaagaga
gctgcccagctagcacggcgggtcatagggctggagctggacacggagggtcacaggctc
ttcgtggccttctcgggctgcatcatctacctaccactcagccgctgttcccagcacggg
gcctgcaggaggagctgcctggcttctcaggacccctactgcgcgtggcagagcgcccac
ggctgcgtggacatcagggggcctgctggaacccaggcggctctagccgggagccaggaa
cccgtggagcttggggactgtcaagatggagcgaccgggagtcagtcgggtgccggggac
tctgcatacggcgtgcgccgggacgtccccgcagcccccgccgccagtgctgttcccgtc
ccgctgctcctggcctccgtggccgccgccttcgccctgggcgcctcggtctccggcctg
ctggtgtcctgcgtgtgccgccgcacccaccgacgccggagcaaggacgtcgagaccccc
ggcctgccgcgcgccctgtccctccgcagcctggcgcgcctgcacggcccggagccgccg
ccgccgcccaaggacgcggacggcgcgcagacgccgcagctctacaccaccttcctgccg
ccccccgacgccgcgccccctcccgagctggcctgcctgcccacgcccgagtccacgccc
gagctgcccgccaggcacctgcagcccgcgggcggcgcctgggagtggaaccagaacggg
aacaacgccaaggagggcccgggccgcgcgcggggcgcgcacgcggcgggcgggcccgcg
ccacgcgtgctcgtgcggccgccgccccccggctgccccgggcaggcggtggaggtgacc
acgctggaggagctgctgcgctacctgcacggcccgcagtccccgggcccctgcgcgccc
gcgcccgcgcccgccgcgcccggccccggcctcctcccgcgcgaccgcgccccgcccgtg
cggctggacgtgccccccgacggccagtgcgcggcccccagcggccgcccggcgcccgcg
ccccggctgggggtcgcggggggccgccggccgcccttccccgcgcaccgcacccccccg
gccctgctcacgcgtgtcccctcgggggcgccctccaggtgctcgggggccacggaccgg
cccctgctgtacctgggccggcccgagagctaccggggccgcgccctaaagcgcgtggac
ctggagaagcccccgctgccccccaagtcctccttgggcgggtccccgccccaggcggcc
gtggccggcggcggccacttggacttctga
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