Sorex fumeus (smoky shrew): 130032448
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Entry
130032448 CDS
T10594
Symbol
TRIM24
Name
(RefSeq) transcription intermediary factor 1-alpha
KO
K08881
tripartite motif-containing protein 24 [EC:
2.3.2.27
]
Organism
sfum Sorex fumeus (smoky shrew)
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sfum01001
]
130032448 (TRIM24)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sfum04121
]
130032448 (TRIM24)
Enzymes [BR:
sfum01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130032448 (TRIM24)
Protein kinases [BR:
sfum01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
130032448 (TRIM24)
Ubiquitin system [BR:
sfum04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
130032448 (TRIM24)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
ANCHR-like_BBOX
PHD
PHD-1st_NSD
zf-RING_5
zf-RING_UBOX
zf-C3HC4
zf-RING_2
zf-C3HC4_2
CRIC_ras_sig
Motif
Other DBs
NCBI-GeneID:
130032448
NCBI-ProteinID:
XP_055979979
LinkDB
All DBs
Position
Unknown
AA seq
1079 aa
AA seq
DB search
MEVAVEKAAAAAASAAAAAAAANGAPSASATAAAASAASAAAAAAPSGENEAESRQGPDS
EQGGEAARLNLLDTCAVCHQNIQSRAPKLLPCLHSFCQRCLPAPQRYLMLPAPMLGSAAQ
PPPPPSSSSSLSSSLPGPGSPAGGSLPFATQVGVIRCPVCSQECAERHIIDNFFVKDTTE
VPSSTVEKSNQVCTSCEDNAEANGFCVECVEWLCKTCIRAHQRVKFTKDHTVRQKEEVSP
EAVGVTSQRPVFCPFHKKEQLKLYCETCDKLTCRDCQLLEHKEHRYQFIEEAFQNQKVII
DTLITKLMEKTKYIKFTGNQIQNRIIEVNQNQKQVEQDIKVAIFTLMVEINKKGKALLHQ
LESLAKDHRMKLMQQQQEVAGLSKQLEHVMHFSKWAVSSGSSTALLYSKRLITYRLRHLL
RARCDASPVTNNTIQFHCDPSFWAQNILNLGSLVIEDKESQPQMPKQNPVVEQNSQPPGG
LSSNQLSKFPTQISLAQLRLQHMQQQVMAQRQQVQRRPAPVGLPNPRMQGPIQQPSISHQ
QPPPRLINFQNHSPKPNGPVLPPHPQQLRFSPNQNMPRQAVKPNPLQMAFLAQQAIKQWQ
ISSGQGAPSAASSTCSTPSSPTVTSAAGYDGKAFGSPMIDLSSPAGGPYNLPSLPDIDCS
STIMLDNIVRKDTSIDHGQPRPPSNRTVQSPNSSVPSPGLAGPVTMTSVHPPIRSPSASS
VGSRGSSGSSSKPAGADSTHKVPVVMLEPIRIKQENSGPPENYDFPVVIVKQESDEESRP
QNTSYPRSILTSLLLNSNQNSASDESVLRSDAPDSTGDQPGLHQENSSNGKPEWLAASQK
SPLHGETRKEDDPNEDWCAVCQNGGELLCCEKCPKVFHLSCHVPTLANFPSGEWICTFCR
DLSKPEVEYDCDAPSHNSEKKKNEGLTKLTPIDKRKCERLLLFLYCHEMSLAFQDPVPLT
VPDYYKIIKNPMDLSTIKKRLHEDNSLYTKPEDFIADFRLIFRNCAEFNEPDSEVANAGI
KLESYFEELLKNLYPEKRFPKLDFRNESEDHKFSDDSDDDFVQPRKKRLKSIDERQLLK
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atggaggtggctgtggagaaggcggcggcggccgcggcctcggcggcggcggcggcagcg
gcggccaacggggccccgtcggcgtcggcgacggcggcggcggcctcggcggcttcggca
gcggcggcggcggcgccgagcggcgagaacgaggccgagagccgccagggccccgactcg
gagcagggcggcgaggcggcccggctcaacctgttggacacttgcgccgtgtgtcaccag
aacatccagagccgcgcgcccaagctgctgccctgcctgcactccttctgccagcgctgc
ctgcccgcgccccagcgctacctcatgctgcccgcgcccatgctgggctcggcggcgcag
ccgccgccgccgccgtcgtcgtcgtcgtcgctgtcgtcgtcgctgcccggacccggctcg
ccggccggcggctccctgccgttcgccacgcaagttggagtcattcgatgtccagtttgt
agccaagaatgtgcagagagacacattatagataatttttttgtgaaggacactactgag
gttcccagcagtacagtagaaaagtctaatcaggtgtgtacaagctgtgaagacaacgca
gaagcaaatggattttgtgttgagtgtgtcgagtggctctgcaagacgtgcatcagagct
caccagagggtgaagttcacaaaagaccacactgtaaggcagaaggaagaagtatctcca
gaagcagttggtgtgaccagtcagaggccagtgttttgtcctttccataaaaaggaacag
ctgaagctttactgtgaaacatgtgataaactgacatgtcgggattgccagttactagaa
cataaagagcacagatatcaatttatagaagaagcttttcagaatcagaaagtaatcata
gatacactaattaccaagctgatggaaaaaacaaaatacataaaattcacaggaaatcaa
atccaaaacaggataattgaagtaaatcaaaatcaaaagcaggtggaacaagatattaaa
gttgctatatttacactgatggtagaaatcaataaaaaaggaaaagctctactgcatcag
cttgagagccttgcaaaggaccatcgcatgaagctaatgcagcaacaacaagaagtggct
ggactttctaaacagttggaacatgtcatgcatttttctaaatgggcagtttccagtggc
agcagtacagcattgctctatagcaagcgattgatcacttaccggttacggcacctactt
cgagcaaggtgtgatgcttcgccagtgaccaacaacaccatccagtttcactgtgatcct
agtttctgggctcaaaatattctcaatttaggttctttagtaatcgaagataaagagagt
cagccacaaatgcctaagcagaatcctgtcgtggaacagaattcacagccaccaggtggt
ttatcttcaaaccagttatccaagtttccaacacagatcagcctagctcaattacgactt
cagcatatgcagcaacaggtaatggctcagaggcaacaggtgcaacggaggccagcacct
gtgggtttaccaaaccctagaatgcaggggcccatccagcaaccttccatctctcatcag
caaccccctccacgtttgataaatttccaaaatcacagccccaaacctaatggaccagtt
cttcctcctcatcctcagcaactgagattttcaccaaaccagaatatgccacgacaagca
gtaaagcccaatcccttacaaatggctttcttggctcaacaagccataaaacagtggcag
atcagcagtgggcaaggtgccccatcggctgccagcagcacctgctccactccttccagt
cccaccgtcactagtgcagcaggctatgacggaaaggcttttgggtcaccgatgattgac
ttaagctcaccagcgggagggccctataacctcccttctcttccggacattgactgttca
agtactattatgctggacaatattgtgaggaaggacactagtatagatcatggacagcca
agaccaccatcaaacagaactgtccagtcaccaaattcatcagtgccatctccaggtctt
gcaggacctgtgacgatgacgagtgtacacccaccaatacgttcacctagtgcctccagt
gttgggagccgaggaagttctggctcttccagcaaaccagcaggagctgattccacacac
aaagtcccagtggtcatgttggagccaatccgaataaaacaagaaaacagtggaccacct
gaaaattacgatttccctgttgttatagtgaagcaggagtcagatgaagaatctagacct
caaaataccagctatccaagaagtatactcacctccctcctcctaaatagcaatcagaac
tcggcctctgatgaatccgtcctgagatcagatgcacctgacagcacaggagatcagcct
ggacttcaccaggaaaattcctcgaatggaaagcctgagtggttggctgcctctcagaag
tccccccttcatggggagacgaggaaagaggatgaccccaatgaggactggtgtgcagtg
tgtcagaatggaggggagctcctatgctgtgaaaagtgtcccaaagtattccatctttct
tgtcatgtgcctactttggcaaattttccaagtggagagtggatatgcactttctgtcgc
gacttatctaaaccagaagttgaatatgattgtgatgctcctagtcacaactcagaaaaa
aagaaaaatgaaggtcttactaagttaacaccaatagataaaaggaagtgtgaacgccta
cttctatttctttattgtcatgaaatgagcctggcttttcaagacccagttccactaact
gtgcctgattattacaaaataattaaaaatccaatggacttgtcaaccatcaagaaaagg
ctacatgaagataattccctgtatacaaagcctgaagattttattgctgattttagattg
atttttcgaaactgtgctgaatttaatgagcctgattcagaagtagccaatgctggtata
aaacttgaaagctattttgaagaacttctaaagaacctatatccagaaaaaaggtttcct
aaactagacttcagaaatgaatcagaagatcataaatttagtgatgactcagatgatgac
tttgtacagccccggaagaaacgcctcaaaagcattgatgaacgccagttgcttaaataa
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integrated database retrieval system
