Sorex fumeus (smoky shrew): 130032553
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Entry
130032553 CDS
T10594
Symbol
CHM
Name
(RefSeq) rab proteins geranylgeranyltransferase component A 1
KO
K23460
Rab proteins geranylgeranyltransferase component A
Organism
sfum Sorex fumeus (smoky shrew)
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
sfum01006
]
130032553 (CHM)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfum04131
]
130032553 (CHM)
Prenyltransferases [BR:
sfum01006
]
Protein prenylation
Rab geranylgeranyltransferase
130032553 (CHM)
Membrane trafficking [BR:
sfum04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
130032553 (CHM)
Endosome - Lysosome transport
Rab GTPases and associated proteins
130032553 (CHM)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GDI
RAE1_2_domI_C
NAD_binding_8
FAD_oxidored
FAD_binding_2
Motif
Other DBs
NCBI-GeneID:
130032553
NCBI-ProteinID:
XP_055980075
LinkDB
All DBs
Position
Unknown
AA seq
650 aa
AA seq
DB search
MADNLPSEFDVIVIGTGLPESIVAAACSRSGQRVLHVDSRSYYGGNWASFSFSGLLSWLK
EYQENNDPGNESLAWQEQILENEDIIALSRKDKTIQHVEVFCYASQDLHEDVEEVGALQK
NHTSVISASSTEAADSACLPRDDESLSTASCEMPIEPILSLDPESILKENDVQISEEKDH
CDDKTCVPSTSEEDTSQTMPVAEDATEQPKKNRITYSQIIKEGRRFNIDLVSKVLYSRGL
LIDLLIKSNVSRYAEFKNITRILAFREGRVEQVPCSRADVFNSKQLSMVEKRMLMKFLTF
CMEYEEHPDEYQAYEKMTFSEYLKTQNLTPNLQYFVLHSIAMASEIGSSTIDGLKATKNF
LHCLGRYGNTPFLFPLYGQGELPQCFCRMCAVFGGIYCLRHSVQCLVVDRESRKCKAIID
QYGQRIISKHFLVEDSYFSENTCSHVQYRQISRAILITDRSVLKADSDQQISILTVPSEE
PGTSAVRIIELCSSTMTCMKGTYLVHLTCLSSKTAREDLESVVQKLFAPYAEVEIENEEV
EKPRLLWAIYFNMRDSSDVSRNSYNDLPPNVYVCSGPDCGLGNDPAVRQAETIFQQICPN
EDFCPPPPNPEDIILDGDSFQPETSEAIQDTNSKTPKESVHLGNPEESSE
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggcggataatctcccttcggagtttgatgtgatcgtaatagggacgggtttgcctgag
tccatcgttgcagctgcatgttcaagaagtggccagagagttctgcatgttgattcacga
agctactatggaggaaactgggccagttttagtttttcaggactgctttcctggctaaag
gaataccaggaaaacaatgaccctggaaatgaaagtctagcatggcaagagcagatcctt
gaaaatgaagacattattgctctcagcaggaaggacaaaaccattcaacatgtggaagta
ttttgttatgccagtcaggatttgcatgaagatgttgaagaagttggtgcactgcagaaa
aatcacacttctgtgatctcagcaagttccactgaagctgcagattctgcctgcttgcct
agagatgatgagtcattaagcactgcaagctgtgaaatgcccatagaaccaattctaagc
cttgatccagagagtatcctcaaagaaaatgatgttcaaatttcagaggagaaagatcat
tgtgatgataaaacttgtgttccatcaacttcagaagaagatacaagccaaactatgcct
gtagcagaggatgccacagagcaaccaaagaaaaacagaattacttattcacaaattatt
aaagaaggcagaagatttaatattgatttggtatcaaaggttttgtattctcgtggtttg
ctaattgatcttctaatcaaatctaatgtcagtcgatatgcagagttcaaaaatatcacc
aggatacttgcatttcgagaaggaagagtggaacaggttccttgttcccgagcagatgtc
tttaacagcaaacaactgtctatggtagaaaagcgcatgttaatgaagtttcttacattt
tgtatggagtatgaggaacatcctgatgaatatcaagcctatgagaagatgacattttct
gaatatttaaaaactcaaaacttaacccccaatctccaatattttgtcctgcattccatt
gcaatggcatcagaaataggcagcagtaccatagatggtctcaaagctaccaaaaacttc
cttcactgtcttggacgttatggcaacactccattcttgtttcctttatatggccaagga
gaacttcctcagtgtttctgcaggatgtgtgctgtgtttggtggaatctattgtcttcgc
cattctgttcagtgccttgttgtggacagagaatctagaaaatgtaaagcaatcatagat
cagtatggtcagagaataatttctaagcatttccttgtggaagacagttacttttctgag
aacacatgctcacatgtgcaatacaggcagatttccagggcaatcctgattacagataga
tctgtacttaaagcagattctgatcaacagatttccattttgacagtaccatcagaggaa
ccaggaacttctgctgttcggatcattgagttatgctcttcaacaatgacatgcatgaaa
ggcacttatttggtccatttgacctgtttgtcttcgaaaacagcaagagaagacttagaa
tcagttgttcagaagttatttgccccatatgctgaagtagagatagaaaatgaagaagtg
gaaaaaccaagacttctgtgggctatttactttaatatgagagattcttcagatgtcagc
aggaactcctacaatgatttaccacccaatgtttatgtctgctctggccccgactgtggt
ttaggtaatgatcctgcagtcagacaggctgaaacaatattccagcaaatctgccctaat
gaagacttctgtccaccccctccaaatcctgaagacattatccttgatggagatagtttt
cagccagaaacttcagaagccatacaagacaccaactcaaagactcccaaggaaagtgta
catctaggaaacccagaggagtcctctgaataa
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