KEGG   Sorex fumeus (smoky shrew): 130032571
Entry
130032571         CDS       T10594                                 
Name
(RefSeq) LOW QUALITY PROTEIN: transportin-3-like
  KO
K15436  transportin-3
Organism
sfum  Sorex fumeus (smoky shrew)
Pathway
sfum03013  Nucleocytoplasmic transport
sfum03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:sfum00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    130032571
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    130032571
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sfum03016]
    130032571
Transfer RNA biogenesis [BR:sfum03016]
 Eukaryotic type
  tRNA transport factors
   tRNA import factors
    130032571
SSDB
Motif
Pfam: TPR_TNPO3_IPO13_4th TPR_TNPO3_IPO13_3rd TPR_TNPO3_IPO13_2nd Xpo1 PSMbeta Importin_rep_3
Other DBs
NCBI-GeneID: 130032571
NCBI-ProteinID: XP_055980101
LinkDB
Position
Unknown
AA seq 977 aa
MLGGDFQGEPPLCPGNGQRGDGASLGASVADTVRRREGRGPAPRRDGSGRGPARWAKPTL
QLVYQAVQALYHHPYPSGKERASFWLGELQRSVHTWEISDQLLQIRQDVESCYFAAQTMK
MKIQTSFYELPTDSHASLRDSLLTHIQNLKDLSPVIVTQLALAIADLTLQMPSWKNIAIY
IAIVEKYSNDVTSLPFLLEILTVLPEEVHSRSLHIGANWHMEIIEDLAFYSSTVVSLLMT
CVEKAGTDEKMLMKVFRCLGSWFNLGVLDSNFMANNKLLALLFEVLQQDKTSSNLHEAAS
DCVCSALYAIENVETNLPLAMQLFQGVLTLETAYYMAVAREDLDKILNYCRIFTELCETF
LEKIVCTPGQGLGDLWTLELLLICAGHPQYEVVEISFNFWYRLGEHLYKTNDEVIHGIFK
AYIQRLLHALARNCQLEPDHEGVPEETDNFGEFRMRVSELVKDLIFLIGSMECFAQLYST
LKEGNPPWEVTEAVLFIMAAIAKSVDPENNPTLVEVLEGVVRLPESVHTAVPYTSIELVG
EMSEVVDQNPQFLDPVLGYLMKDLCEKPLASVAAKAIHNLCSVCRDHMAQHFNGLLEIAR
SLDSFMLSPEAAVGLLKGTSLVLARLPLDKITECLSELCSVQVMALKKLLSQEPSNGLSS
DPTVFLDRLAVIFRHTNPIVENGQTHPCQKVIQEIWPVLSETLNKHRADNRIVEHCCRCL
RFAVHCVGKGSAALLQPLVTQMVNVYHVHQHSCFLYLGSILVDVYGMEEGCRQGLLDMLQ
ALCIPTFQLLEQQNRLQNHPDTVDDLFRLATRFIQRSPVTLLRSQVVIPILQWAIAYTTL
DHRDANCSVMRFLRDLIHTGVVNDHEDDFELQKELIGQVMNQLGQQLVSQLLHTCCFCLP
PYTLPDMAEVLWEIMQVDRPTFCRWLENSLKGLPKETTVGAVTVTHKQLTDFHKQVTSAE
ECKQVCWALRDFTRLFR
NT seq 2934 nt   +upstreamnt  +downstreamnt
atgttggggggcgacttccagggagaaccccccctctgccccggtaacggccaaagagga
gatggcgccagtctgggagcgtccgtggccgacacagtgaggaggcgcgaaggcagaggg
ccagccccccggagagacggctcaggacgagggccggcgcggtgggccaagcccaccctg
cagctcgtgtaccaggcggtgcaggcgctctaccaccacccgtaccccagcggcaaggag
cgtgcctcgttttggctgggggagctgcagcgttcggttcacacatgggagatttcagac
cagttgttacagatacgtcaggatgtggaatcatgctattttgctgcacagaccatgaaa
atgaagattcagacctcattttatgagctccccacagactctcatgcctctttacgggac
tcattattaactcatatccagaacttgaaagacttgtcacctgtcattgtaacacagctg
gctttagcaatagcagaccttaccctacagatgccttcctggaaaaatatagcaatatat
atagcaatagtggaaaaatatagcaatgatgtaacttctctgccttttctgctggagatc
cttacagtattacctgaagaagtacatagccgttccttacatattggggctaattggcat
atggaaattatagaagatttggccttctactctagtacagtagtatctctattgatgacc
tgtgtagaaaaagcaggaacggatgagaaaatgcttatgaaggtcttccgctgtttggga
agttggtttaatttaggagttttagacagtaactttatggctaataataagttactagca
ctcctttttgaagttttgcaacaggataaaacctcatccaaccttcatgaagctgcttca
gattgtgtatgctcagctctctatgcgattgagaacgtggaaactaatttgccattagcc
atgcaactttttcaaggagttctgacattggagaccgcctattacatggctgtggcacgt
gaagatttagacaaaattttgaattactgtcgtattttcactgaactatgtgaaactttt
cttgagaaaattgtttgtactccaggccaaggtcttggggacctgtggaccctagaactg
cttcttatctgtgcaggacatccgcagtatgaggttgtagaaatttcctttaacttttgg
tatcgactaggagagcatttatataaaactaatgatgaagtaattcatggtatcttcaaa
gcttacattcagaggctgcttcatgccttggctcgaaactgccagctggaaccagaccat
gagggggttcctgaagagactgacaactttggggagtttcggatgagggtatcagaactg
gtgaaagacttgattttcttgattgggtctatggagtgttttgctcagttatattctact
ctgaaagaaggcaacccaccctgggaggtgacagaagcggttctctttatcatggctgct
atagcaaagagtgttgatccggagaacaacccgacccttgtggaggtcctggaaggtgtg
gtccggctgcctgagagcgtgcataccgccgtgccctacaccagcattgagttggtcgga
gagatgagtgaagtggtcgaccaaaaccctcagttccttgaccctgtgttgggctacttg
atgaaagacctgtgtgaaaagcctctggcttctgttgcagctaaagccattcacaactta
tgctctgtttgccgggatcacatggctcagcactttaatggactcttggagattgcccgt
tcccttgactcctttatgttgtctccagaagctgctgtgggcttgttgaaaggaacatca
cttgtcctagccagattacctttggataagattactgaatgccttagtgaactatgttct
gtacaggttatggcattgaaaaagctgttgtctcaggagcccagcaacggcctgtcatca
gaccccactgtgttcttagatcgcctcgcagtgatatttagacataccaatcccatcgtg
gaaaatggacagactcatccatgccaaaaagtcatacaggaaatctggccagttttgtct
gaaactctgaataagcatcgggctgataatcggatcgtggagcattgctgcaggtgtctc
cgctttgccgtccactgtgtcggcaaaggctctgctgccctcttgcagccgctcgttaca
cagatggtgaatgtgtaccatgtacatcagcattcctgtttcctgtacctggggagtatc
cttgtggatgtgtatggcatggaggagggctgtcggcaggggctgctggacatgctccag
gcactgtgcatccccacctttcagctcctggaacagcagaacaggctgcagaatcacccc
gacaccgtggacgacctgttcaggctagccaccaggtttattcaacgtagccctgtcacc
ttactgaggagccaagtggtcattcctattttacagtgggccattgcctataccaccctc
gaccaccgggatgccaattgtagtgtcatgagattcctacgagacctcatccacacagga
gtagtcaatgatcatgaagacgactttgaattacagaaagaactgattggacaagtgatg
aaccagcttggccaacagctcgtaagccagctgctccacacgtgctgcttctgcctcccc
ccctatacactaccagacatggccgaagtgctctgggagatcatgcaggttgacagaccg
actttttgtcggtggttagagaattccttgaaaggtttgccaaaggagacgaccgtggga
gctgtgacagtgacacacaaacagcttacagacttccacaagcaagtcactagtgctgag
gaatgtaaacaagtttgctgggccttgcgagacttcaccaggctgttccgatag

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