Sorex fumeus (smoky shrew): 130032609
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Entry
130032609 CDS
T10594
Symbol
CSTF2
Name
(RefSeq) cleavage stimulation factor subunit 2 isoform X1
KO
K14407
cleavage stimulation factor subunit 2
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
130032609 (CSTF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfum03019
]
130032609 (CSTF2)
Messenger RNA biogenesis [BR:
sfum03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
130032609 (CSTF2)
U7-dependent histone pre-mRNA processing factors
130032609 (CSTF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_10
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
130032609
NCBI-ProteinID:
XP_055980119
LinkDB
All DBs
Position
Unknown
AA seq
606 aa
AA seq
DB search
MAGLPVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYG
FCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTGAPVIESPYGESIN
PEDAPESISKAVASLPPEQMFELMKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMR
IVDPEIALKILHRQTNIPTLIAGNPQAVHNAGPVSGASVQMNQQNSQEDMSKEEWSGARD
INCSFQVPEYMGGMHVNGAPPLMQASMQAGVPPPGQMPAAVAGPGALAPGGGMPAQMGMP
GSGPVPMDRGQGTLQHSPVGPAGPASIERVQVPMQDPRAAMQRGALPASVATPRGLLGDA
PNDPRGGTLLSVTGEVEPRGYLGPPHQGPPMHHVPGHDSRGPPPHEMRGGPLGEPRPLMA
EPRGPMLDQRGPPLDGRGGRDPRAMDARAMEARAMEARGLDARGLEARAMEARAMEARAM
EARAMEARAMEVRGMDPRGPVPGPRGPLPAGIQGPGSINMGAVGPQGSRQVQVMPGAGMQ
GASIQGGQPGGFSPGQSQVTPQDHEKAALIMQVLQLTADQIAMLPPEQRQSILILKEQIQ
KSTGAP
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtttgccggtcagagaccctgcggtggatcgttctcttcgttcagtattcgtg
gggaatattccctatgaagctacagaggagcaattaaaagacatcttttctgaagttggg
cctgttgttagtttcaggttggtatatgacagggaaacgggaaagccaaagggttatggc
ttctgtgaataccaagaccaagagactgcacttagtgccatgcgcaacctgaatgggcgt
gaattcagtgggagagcacttagagtggacaatgctgccagtgaaaagaacaaagaagaa
ctaaagagccttggcactggggcccctgtgattgagtcaccttatggagagagtattaat
cctgaggatgcccctgaatctatcagcaaagcggtggctagtcttccaccagagcagatg
tttgaactgatgaaacaaatgaagctgtgtgtccagaatagtccccaggaagcaaggaac
atgttgcttcagaatcctcaattggcttatgctttgctgcaagcacaggtagtgatgaga
attgtggatccagagattgcgctgaaaattctgcatcgccagacaaatattccaacactg
attgcaggcaaccctcaagcagttcacaatgctggacctgtttcaggagccagtgtgcaa
atgaaccagcagaattctcaggaggatatgtcgaaagaagagtggtcgggagccagagat
attaattgcagtttccaggttccagagtacatgggtggaatgcatgtcaatggtgcccct
cctttgatgcaagcttctatgcaggctggagttccaccaccagggcaaatgccagctgct
gtagcaggacctggtgccttagctcctggagggggaatgccagcccagatgggaatgcca
ggaagtggaccggtgcccatggaccggggacaaggaaccctacaacactcgcccgtggga
cccgccgggcctgcatcaattgagcgagttcaagtacccatgcaagatcccagagcagca
atgcagcgtggggccttgcctgccagtgtggcaactcctcgaggtctattaggtgatgcg
ccaaatgacccacgtggaggtactttactttctgtaactggagaagtagagccaagaggt
tacctcggaccacctcaccaaggtcctcctatgcaccatgtccctggccatgatagccgt
ggcccacccccacatgagatgaggggagggccattaggtgagcctagacctctaatggca
gagccaagaggacccatgctagatcagaggggtccgcccttggatggcagaggtggaaga
gatcccagagccatggatgcccgggccatggaggcacgagccatggaggcaaggggattg
gatgctagaggattggaggctcgtgcaatggaagcccgagcaatggaagcccgagcgatg
gaggcccgagcaatggaggcccgagcaatggaagttagagggatggatccaaggggccct
gtccctggccctagaggccctctgcctgctggaatccaagggcctggttcaattaacatg
ggggcagttggccctcaggggtccagacaggtccaagtcatgccaggggcaggcatgcaa
ggagccagtattcagggtggacagcctgggggctttagtcctgggcaaagccaggtgact
ccacaggaccatgaaaaggctgctttgatcatgcaagttcttcagcttactgcagaccag
attgccatgctgcctcctgaacagaggcaaagtatcctgatcttaaaggaacaaatacag
aaatccactggagcaccttga
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