Sorex fumeus (smoky shrew): 130032617
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Entry
130032617 CDS
T10594
Symbol
HDX
Name
(RefSeq) highly divergent homeobox
KO
K24884
highly divergent homeobox
Organism
sfum Sorex fumeus (smoky shrew)
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfum03000
]
130032617 (HDX)
Transcription factors [BR:
sfum03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
130032617 (HDX)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
Motif
Other DBs
NCBI-GeneID:
130032617
NCBI-ProteinID:
XP_055980134
LinkDB
All DBs
Position
Unknown
AA seq
690 aa
AA seq
DB search
MNLRSVFTVEQQRILQRYYENGMTNQSKNCFQLILQCAQETKLDFSVVRTWVGNKRRKMS
SKNSESGTATTGTVSGPSLGTPDITVRNVVNIARSSSQQSSWTSSNNDVIVTGIYSPASS
SNRQGTTKHTNTQITEAHKIPNQKTASKNDTEFQLHIPVQRQVAHCKNASLLLGEKTIIL
SRQTSVLNSGNSVYNHTKKNYGNSSMQTSEITVPQKPSVCNRPCKIEPVGMQRLYKPEHM
GSRNLCGQKPPIRDPYCRTRNLEIREVFSLAVSDYPQRILGGSGTQKSNSAEGNCLSIAM
ETGDADDEYAREEELALMGAQIPSYSRFYESGSSLRAENQSTTLSGPGRNMPNSQMVNIR
DLSDNVLYQNRDCHLTPRTSFHTASTTMYSNTNSSRSNFSPHFSSPNQLRFSQNQNNYQI
SGNLTVPWITGCSRKRALQDRTQFSDRDLATLKKYWDNGMTSLGSVCREKIEAVATELNV
DCEIVRTWIGNRRRKYRLMGIEVPPPRGGPADFSEQPESGSLSALTHREEAGPEGEDNDR
NDEVSICLSEGSSQEESNDVVPNEERSQEEGHHALSTENVKIEILDDEESDMISNSEVEQ
VNSLLEYKNEEVRFIENELEIQKQKYFKLQTFVRSLILAMKADNKEQQQALLSDLPPELE
ELDFDHASLEPDDTSFTVSSLSEKNASGSL
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgaatctccgttctgtatttactgtagaacaacaaaggattttacagcgttattatgaa
aatggaatgacaaatcaaagtaaaaactgctttcagctcattttacagtgcgcacaagag
actaaactggacttcagtgtagttaggacgtgggttggcaataagagaagaaaaatgagt
agtaagaattctgaatcaggaacagcaacaacaggaactgtttccggtccctctttggga
actccagacattacagtcagaaatgtagttaatattgctcgatcctcaagtcaacaatct
tcatggacatcttccaataatgatgtcattgtaactggtatatacagcccagccagttca
tcaaataggcaaggaacaaccaaacatacaaatacacaaatcacagaagcacataaaatc
cctaatcagaaaacagccagtaaaaatgacactgagtttcagttgcacattcccgttcaa
aggcaagtggcacactgtaaaaatgcctctctgctcttaggtgaaaaaactattattttg
tcaagacagacaagtgtgttaaattctggaaactcagtatataatcacacaaagaaaaac
tatggaaactcttcaatgcaaacttctgaaataacagtacctcaaaagccatcagtgtgt
aaccgaccttgtaaaattgagccagttggaatgcaaaggttatataagcctgaacacatg
ggttcacgtaacttatgtgggcaaaagccaccaattagagacccttactgcagaacgcgg
aacttggaaatccgtgaagtattttcactggctgttagtgattacccacagagaattctg
ggaggaagtggcacgcagaagtccaattcagcagaaggaaattgtttgtctattgcaatg
gaaactggggatgctgatgatgagtatgccagagaggaagagttggcattgatgggagca
cagataccaagctactcaagattttatgaaagtggcagttcccttagagctgagaaccaa
agtacaactttgtctgggccaggaagaaatatgccaaattcacaaatggttaacattaga
gacctttcagataatgtgttgtatcaaaacagagactgtcacttgacaccacggacctca
tttcacacagcatctactacaatgtacagtaatacaaattcatcacggagtaatttttct
ccacatttttcatcaccaaaccaactgaggttttcacaaaaccaaaacaattaccagatt
tcaggaaaccttactgtgccttggattacagggtgttctagaaaaagagcactacaagac
cgcactcagttcagtgatcgagacttagctacccttaagaagtactgggataatggcatg
acaagccttggctctgtctgtagagagaaaattgaagcagttgcaactgaattaaatgtt
gactgtgaaatagttcggacatggattgggaatcgaagaaggaaatatcgtttaatgggt
attgaggttccacctccaagaggaggtcctgctgatttttctgagcagcctgagtctggt
tctttgtcggcactcacacatagagaagaagccggtcctgaaggagaagataatgacaga
aatgatgaagtatccatctgtttgtctgaaggaagctctcaagaagagtccaatgacgtg
gttccaaatgaagaacggtctcaagaggagggacaccatgcattatccacagaaaatgtg
aaaatagaaatactagatgatgaggaaagtgacatgataagcaattctgaagttgaacaa
gtaaattctctcttggaatataagaatgaagaagtcagatttattgaaaatgaactagaa
attcagaagcaaaaatactttaaactccaaacatttgttagaagcttaatactagctatg
aaagctgacaataaggaacaacagcaggcactgctatcagatttacctcctgaattagaa
gagttggatttcgatcatgcttcactggagcctgatgatacctcattcactgtgtcttct
ttatcagagaaaaatgcctcaggcagcttgtga
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