Sorex fumeus (smoky shrew): 130032659
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Entry
130032659 CDS
T10594
Symbol
ATRX
Name
(RefSeq) transcriptional regulator ATRX isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
130032659 (ATRX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfum03000
]
130032659 (ATRX)
03036 Chromosome and associated proteins [BR:
sfum03036
]
130032659 (ATRX)
Transcription factors [BR:
sfum03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
130032659 (ATRX)
Chromosome and associated proteins [BR:
sfum03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
130032659 (ATRX)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
ATRX_C
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
130032659
NCBI-ProteinID:
XP_055980178
LinkDB
All DBs
Position
Unknown
AA seq
2479 aa
AA seq
DB search
MTAEPMSESKLNTLVQKLHDFLAHSSEESEETSSPPRLVMNQSTDKISGSGTNLDMMESS
KEEGASSSEKSKSSGSSRSKRKPSVVTKYVESDDEKPLDETVNEDASNENSENDITMQSL
PKGTVIVQPEPVLNEDKDDFKGPEFRSRSKMKTESLKKRGEDGLHGIVSCTACGQQVNHF
QKDSIYRHPSLQVLICKNCFKYYMSDDISRDSDGMDEQCRWCAEGGNLICCDFCHNAFCK
KCILRNLGRKELSTIMDENSQWYCYICHPEPLLDLVTACNSVFENLEQLLQQNKKKIKID
NEKSNKVYDHTSRFSPKKNNSNCNGEEKKLDDSCSGSVTYSYSALIVPKEMIKKAKKLIE
TTANMNSSYVKFLRQATDHSEINSATKLRQFKAFKSVLADIKKAHLALEEDLNSEIQALD
VINKEKNTKEHKIVYAKCEAKVRKGEKPLVMERKDISKSEAKLLRKQVDSEQMDQNVPVK
EQRENKSTNSENKKTDKNEPQYEPANTSEDLDMDIVSVPSSVPEDIFENLETAMEVQSSA
NYQGDGNSGTEQELESSSVKLNVTSKDNRGCIKSKTTAKVTKELYVKLTPVSLSNSPVKG
TDCQEAPQDKDGYKSSNLNPKPENCGLEQENDGNERLVESEAPLLSEDSDLRRSPRVKTT
PLRRQTETNPATSNSDEESNEKQKLSIPDRKKDKRNSSGSAMNNPKPNKSPKSKQSVSVD
QNSDSDEMLSILKEVTRMRRGSSSDTDINDTHTNNESTLYDLKTPREAEKGKRKRKSSTS
GSEFDIKKGKSAKRSIISKKKRQNQSESSNYDSELEKEIKSMSKIGTTKTTRKRVSNKQN
HDSSEDEKSSKKVLDEQGQKSVKTVQEESSDEGEMKQESKNVSSTEGTVDKDKIIELSDP
LSKKQQPGVSSDGSDKLSSGKEDHFNSPDDKKVDGGKEKSKHLKTKMCKEMQGGLSDVAE
KFAEKRQNDESSDDDKKQSKKGAEEKETKTIDLKKVVKVEQHYESSSDGMEKLPEGEEIS
NFSVGMKNKNSTVEKKSKKGKVKSSKKKDELSDNAEKLPGKRDSCDSSEDKRSKNAASGR
EKKRSNLSEKRSKKRQDCSSSDTERYSVKEEGCNSSDKRTKRIELRERRNLNLKRNTKRV
QSGSSSSDAEESSEDNKKLKKQRSGAKKKGSGVKEKMRNSLRTSTKRKQADITSSSSDIG
DDDQNSAGEGSSDEQKIKPVTENLVLTAHTGFCQSSGDETLSKSVTVTVDDDDDDNDPEN
RIAKKMLLDEIKANLSSDEDGSSDDEAEVGKKRTGKHNEETIEETKNQVNSESDSDSEES
KKPRYRHRLLRHKLTVSDGESGEEKKTKPKEHKEAKVRNRRKVSSEDSEDSDFQESGVSE
EVSESEDEQRPRTRSAKKAELEENQRSYKQKKKRRRIKVQEDSSSENKSNSEEDKEEEED
EEEEEEDENDDSKSPGKGRKKIRKIIKDDKLRTETQNALKEEEERRKRIAEREREREKLR
EVIEIEDASPTQCPITTKLVLDEDEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCES
VKKTKKSPGSGCILAHCMGLGKTLQVVSFLHTVLLCKKLDFSTALVVCPLNTALNWMNEF
EKWQEGLKDDEKLEVSELATVKRPQDRSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSR
KLKEIFNKALVDPGPDFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEY
HCMVNFIKENLLGSIKEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRK
DYTALTKFLPPKHEYVLAVRMTSIQCKLYQYYLDHLTGVGNSNEGGRGKAGAKLFQDFQM
LSRIWTHPWCLQLDYISKENKGYFDEDSMDEFLASDSDETSMSLSSDDRTKKKKTKGKRG
KKDSSSSGSGSDNDVEVIKVWNSRSRGGGEGNVDESGNNPSVSVKLEESKATSSSNPSSP
APDWYKDFVTDSDAEVLEHSGKMVLLFEILRMAEEIGDKVLVFSQSLLSLDLIEDFLELA
SREKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIIST
KAGSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYD
RQVTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDPNSEKKKKRDTPMLPKDTIL
AELLQIHKEHIVGYHEHDSLLDHKEEEELTEEERKAAWAEYEAEKKGLTMRFNIPTGTNL
PPVSFNSQTPYIPFNLGALSAMSNQQLEDLINQGREKVVEATNSVTAVRIQPLEDIISAV
WKENMSLTETQVQALALSRQASQELDVKRREAIYNDVLTKQQMLISCVQRILMNRRLQQQ
YNQQQQQQQQQQMTYQQATLSHLMMPKPPNLIMNPSNYQQIDMRGMYQSVAGGMQPPPLQ
RAPPPMRSKNPGPSQGKSM
NT seq
7440 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgagcccatgagtgagagcaagttgaatacattggtgcagaagcttcatgac
tttctagcacactcatcagaagaatctgaagaaacaagttcacctccaaggcttgtgatg
aaccaaagcacagataaaattagtggttctggcactaacttggatatgatggaaagcagc
aaagaagagggagctagctcttctgaaaaatccaaatcttcaggatcatcacgatcaaag
aggaaaccttctgtagtaacgaagtatgtagaatctgatgatgagaaacctttggatgaa
actgtaaatgaagatgcttctaatgaaaattcagaaaatgatattactatgcaaagcttg
ccaaaaggtacagtgattgtacaaccagagccagtgctgaatgaagacaaagatgatttt
aaagggcctgaatttagaagcagaagtaaaatgaaaactgaaagtctcaaaaaacgcgga
gaagatgggcttcatgggattgtgagctgcacagcttgtggacagcaggtcaatcatttt
caaaaagattccatttatagacatccttctctgcaagtacttatttgtaagaattgcttt
aaatattacatgagtgatgatattagccgtgactcagatggaatggatgaacaatgtagg
tggtgtgcagaaggcggaaacttgatctgttgtgatttttgccataatgctttctgcaag
aaatgcattctgcgcaaccttggtcgaaaggagctgtctacaataatggatgaaaacagc
caatggtattgctacatctgtcaccctgagcctttgttggacttggtcactgcttgtaac
agcgtatttgaaaatttagagcagttgttgcaacaaaataagaagaagataaaaattgat
aatgaaaagagtaataaagtgtatgaccatacatccagattttctccaaagaaaaataat
tcaaattgtaatggggaagaaaagaaattagatgattcatgttctggttcggtaacttac
tcttactcagcactaattgtgcccaaagagatgattaagaaagctaaaaagctgattgag
acaacagcaaacatgaattccagttatgttaagtttttgaggcaggcaacagatcattca
gaaatcaattctgctacaaaattacgtcagtttaaggcttttaaatctgtgttagctgat
attaagaaagctcatcttgcactagaagaagatttaaattcagaaattcaagctttggat
gttataaacaaagagaaaaataccaaagagcataaaatcgtgtatgctaagtgtgaagca
aaagtacgtaaaggagaaaaacccttggttatggagaggaaggatatttcaaagtcagaa
gctaaattgctaagaaagcaggtagatagtgaacagatggatcagaatgttccagtgaag
gaacaaagagaaaataaaagcacaaatagtgaaaataagaaaactgataaaaatgaacct
cagtatgaacctgctaacacttctgaagacttagacatggatattgtgtcagttccttcc
tcagttccagaagacatttttgagaatcttgagactgctatggaagttcagagctcagct
aattatcagggagatggaaacagtggaactgagcaagaactggagagttcttctgtaaaa
ttaaatgttacttcaaaagacaacagaggatgtattaagtcaaaaactacagctaaagta
acaaaagaattatatgtcaaactcacccctgtttctctttctaattctccagttaagggt
actgattgtcaggaggctccacaagataaagatggctataaaagttctaatctgaacccc
aagccagagaactgtggactggaacaggaaaatgatggtaatgagcgtttagttgaaagt
gaagctccattactttcagaagactctgaccttcgaagatccccacgtgtaaagactaca
ccattaaggcgacagacagaaaccaaccctgcaacatctaattcagatgaagaaagtaat
gaaaaacaaaaactatccattccagatagaaaaaaggataagcgtaattcttctggtagt
gctatgaataatcctaaaccgaataaatcacctaaatctaaacagtcagtgagtgtagat
cagaattcagattctgatgaaatgctatctatcctcaaagaggtaactaggatgagacgt
ggctcttcttcagatactgatattaatgatacccatacaaataatgagagcactttatat
gatttaaaaactccaagggaagctgagaaagggaaaaggaaacgaaaaagttctacttct
ggctcagaatttgatattaaaaagggcaaatcagctaaaaggtctataatttccaaaaag
aaacgtcagaaccaatctgaatcttctaattatgattcagaattagaaaaagagataaag
agcatgagcaaaattgggactaccaaaacaactagaaaaagagtttcgaataaacaaaat
catgattcttccgaagatgagaagagtagcaaaaaggtattggatgaacaggggcagaaa
agtgtgaaaactgtacaagaggagtcatctgatgaaggtgaaatgaaacaagagagcaaa
aatgtctcttctaccgaaggcacagttgataaagacaaaatcatagaattaagtgatcca
ctctccaagaagcagcaaccaggtgtttcctctgatggttctgataaactttcttctggg
aaagaggaccattttaattctccagatgacaaaaaggttgatggaggtaaagagaagagt
aagcatctgaaaaccaaaatgtgtaaggaaatgcaaggtggcttatctgatgttgctgag
aaattcgcagagaaacgacagaatgatgagtcctctgatgatgacaaaaagcagagcaaa
aagggagctgaagaaaaagaaacgaaaactatagacttgaaaaaagtagttaaagtggaa
caacactatgaatcatcatctgatggcatggagaaattacctgagggagaagaaatatct
aacttttcagtgggcatgaaaaataagaactcaactgtagaaaagaaaagtaaaaaaggc
aaagttaaatcttctaaaaagaaggatgaattatctgataatgctgagaagttaccaggg
aagcgagatagttgtgattcttctgaagataaaagaagtaaaaatgcagcatctggtaga
gagaagaaaagaagcaacttgtctgaaaagcgttcaaagaagagacaagattgttcatca
tctgatactgagagatattctgtaaaagaggagggttgtaattcttctgataagagaacg
aaaagaattgaattaagggaaagaagaaatttaaatttaaagagaaataccaagagagtg
caaagtggttcatcatcatctgatgcagaagaaagctctgaagataataaaaagttgaag
aaacaaagaagtggagcgaaaaagaagggaagtggagttaaggagaaaatgagaaactca
ctaagaacaagcactaaacggaaacaagctgacattacttcatcatcttctgatatagga
gatgatgatcagaattctgcaggtgagggaagcagtgatgaacagaaaattaagcccgtg
actgaaaatttagtgctgactgcacatactggattttgccagtcttcaggagatgaaacg
ttatctaaatcagtgactgtcacggtggatgatgatgatgatgacaacgatcctgagaat
agaattgccaagaagatgcttttagatgaaatcaaagccaatctctcctctgatgaagat
ggatcatcagatgatgaagctgaagtaggaaaaaaaagaaccggaaaacacaatgaagaa
actattgaggaaacaaaaaatcaggtcaattctgaatcagattcagattctgaagaatct
aagaaaccaagatacagacataggcttttgaggcacaagctgacagtgagtgatggagaa
tctggagaggaaaaaaagacaaaaccgaaagaacacaaagaagcaaaagttagaaataga
cggaaggtgagcagtgaagattctgaagattctgattttcaggaatctggagttagtgaa
gaagttagtgagtctgaagatgaacagcgacctagaacaaggtctgcaaagaaagcagag
ttagaagaaaatcagcggagttataaacagaaaaagaaaaggcgacgaattaaggtccaa
gaagattcatccagtgaaaacaagagtaattctgaagaagataaagaagaggaggaggat
gaagaggaagaggaagaagatgaaaatgatgattctaaatcccctggaaaaggcagaaag
aaaattagaaagattattaaggatgataaactaagaacagaaacacagaatgctcttaag
gaagaagaagagagacgaaaacgtattgctgagagggaacgggaacgagagaaattgaga
gaggtgatagaaattgaagatgcttcacctacccagtgtccaataacaacaaagttggtt
ttagatgaagatgaggaaactaaagaacctttagtgcaggttcatagaaatatggttatc
aaattgaagcctcatcaagtagatggtgttcagtttatgtgggattgctgttgtgaatct
gtaaaaaaaacaaagaaatctccaggttcaggatgtattcttgcccactgcatgggcctt
ggtaagactttacaggtggtaagttttcttcatacagttcttttatgtaagaaattggat
ttcagcactgctttagtcgtttgtcctcttaatactgcattgaattggatgaatgaattt
gagaagtggcaagagggattaaaagatgatgaaaaacttgaggtttctgagttagcgact
gtgaaacgtcctcaggatagaagctacatgctacagagatggcaagaagatggtggtgtt
atgatcataggctatgagatgtacaggaatcttgctcaaggaaggaatgtgaaaagtagg
aaacttaaagaaatattcaacaaagctttggttgatcctggccctgactttgttgtttgt
gatgaaggccatattttaaaaaatgaagcatctgctgtttcaaaggctatgaattctata
cgatcaaggagaaggattattttaacaggaacaccacttcaaaataacctgattgaatat
cactgcatggttaacttcatcaaggaaaatttgcttggatctattaaggagttcaggaat
agatttataaatccgattcaaaatggtcagtgtgctgattctaccatggtagatgtcaga
gtgatgaaaaagcgtgctcacattctctatgagatgttagctggatgtgttcagaggaaa
gattatacagcattaacaaagttcttgcctccaaaacatgaatatgtattagctgtaaga
atgacttcgattcagtgcaagctttatcagtactacttagatcacttaacaggtgtaggt
aatagcaatgaaggtggaagaggtaaggcaggtgcaaaactcttccaagattttcagatg
ttaagtagaatttggactcatccttggtgtttgcagctggactacattagcaaagaaaat
aagggatattttgatgaagacagtatggatgaatttttagcttcagattccgatgaaacc
tccatgagtttaagctctgatgatcgtacaaaaaagaagaaaacaaaagggaaaagagga
aaaaaagatagtagttcaagtggaagtggcagtgacaatgatgttgaagttattaaagtc
tggaattcaagatctagaggaggtggtgaaggaaatgtggatgaatctggaaacaatcca
tcagtttctgtaaagctggaagaaagcaaagctacttcctcttctaatccaagcagccct
gctccagactggtataaagattttgttacagattctgatgctgaggttttggagcattct
gggaaaatggtacttctctttgaaattcttcgaatggcagaggaaattggggacaaagtc
cttgtttttagccagtctctcctatccctggacttgattgaagattttcttgaactagct
agtagggaaaagacagaagataaagataaaccccttatttataaaggtgaagggaagtgg
ctccgaaacattgactattaccgcttggatggatcaactactgcacagtcaaggaaaaaa
tgggctgaagaatttaatgatgaaactaatgtgagaggtcgattgtttatcatttctacc
aaagcgggatctcttgggattaatttggtagctgctaatcgagtgattatatttgatgct
tcttggaatccgtcttatgacatccagagtatatttagagtttatcgctttggacaaact
aaacctgtgtatgtatataggttcttagctcagggaaccatggaagataaaatttatgat
cggcaagtgactaagcagtcactatcatttcgagttgttgatcaacaacaggttgaacgt
cactttaccatgaatgagcttacggaactttatacatttgagccagacttgctagatgac
cctaactcagaaaagaagaagaaaagggatacccctatgctgccaaaggacaccatactg
gcagaacttctccagatacataaagaacacattgtaggatatcatgaacatgattctctt
ttggaccacaaagaagaagaagagttgactgaagaagaaagaaaagctgcttgggctgaa
tatgaagcagaaaagaagggactgaccatgcgtttcaacataccaactgggaccaattta
ccccctgtcagtttcaactctcaaactccttatattcctttcaacttaggagccttgtca
gcaatgagtaatcaacagctggaggacctcattaatcaaggaagagaaaaagttgtggaa
gcaaccaacagtgtaacagccgtgaggattcagcctcttgaagacatcatttctgctgta
tggaaggaaaacatgagtctcacagagacccaagttcaagcattagcattaagtagacaa
gccagccaggaacttgatgttaaaagaagagaagcaatctacaatgatgttttgacaaaa
cagcagatgttaatcagctgtgttcagcgaattcttatgaaccgaaggcttcagcagcag
tacaatcaacagcagcagcaacagcaacagcaacagatgacttaccaacaagcgacactg
agtcacctcatgatgccaaagccaccaaatttaataatgaatccttctaattaccagcag
attgatatgagaggaatgtatcagtcagtggctggtggtatgcagccaccaccattacag
cgtgcaccaccaccaatgagaagcaaaaatccaggaccttcccaagggaaatcaatgtga
DBGET
integrated database retrieval system
