Sorex fumeus (smoky shrew): 130032741
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Entry
130032741 CDS
T10594
Name
(RefSeq) histidine--tRNA ligase, mitochondrial
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
130032741
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sfum01007
]
130032741
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfum03016
]
130032741
Enzymes [BR:
sfum01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
130032741
Amino acid related enzymes [BR:
sfum01007
]
Aminoacyl-tRNA synthetase
Class II (A)
130032741
Transfer RNA biogenesis [BR:
sfum03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
130032741
Prokaryotic type
130032741
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_His
HGTP_anticodon
HGTP_anticodon2
PDZ_6
Motif
Other DBs
NCBI-GeneID:
130032741
NCBI-ProteinID:
XP_055980265
LinkDB
All DBs
Position
Unknown
AA seq
502 aa
AA seq
DB search
MPQLGLLQGRAWAVLLGPLLRPPRAVCLRAVRSQSQVAEALITSELKPQEKANFTLKTPK
GTRDFSPQQVVVREKILDLIVSCFKRHGAKALDTPAFELKETLTEKYGEESQLMYDLKDQ
GGELLSLRYDLTVPFARYLAMNKVKKMKRYHVGKVWRRESPSVVQGRYREFCQCDFDIAG
QYDPMIPDAECLKIICEILSGLQLGDFIIKVNDRQILDGMLAICGVPESKFYAICSSIDK
LDKVSWNDVRHEMVTMRGLAPEVADRVGDYVQCHGGVSLVEQMFQDPRLSQNKQALKGLE
DLKLLFEYVTLFGIAEKISFDLSLARGLDYYTGVIYEAVLLQAPAQAEGKALNVGSVAAG
GRYDGLVGSFGHKVPCVGLSIGVERIFSIMEQQMKTFGEKIRTTETQVFVATPQKGFLRE
RLKLIAELWDAGIKAELLYKNNPKLLTQLSYCESMDIPLVAIIGEQELKEGVIKLRSVVS
REEVAVKRENLVIEIQKRLSES
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgccgcagctcggactcctgcaggggagggcctgggcggtgctgctcggcccgctcctg
cggccgccgcgtgctgtgtgcctccgggctgtccgttcccagagccaggttgcagaggcc
ttgataacatccgagctgaaaccacaagaaaaggccaatttcactctcaagacccctaag
ggcactagagactttagtccccaacaagtggttgtgagggagaaaattcttgatttgatt
gtcagctgctttaaacgtcatggagcaaaggcattggataccccagcatttgagctaaaa
gaaacactcactgagaagtatggcgaggaatctcagcttatgtatgatctgaaggatcag
gggggcgagctcttatctctgcgctatgaccttactgttccttttgctcgttacctggcc
atgaataaagtgaagaagatgaagcgctaccatgttggaaaggtgtggcggagagagagc
ccaagcgtggtccaaggccgctaccgagagttctgccagtgtgattttgacattgctggt
cagtatgatccaatgatccctgatgctgagtgtttgaagatcatttgtgaaatcctaagt
gggttgcagcttggggacttcatcattaaggtcaatgatcggcagattttggatgggatg
cttgccatttgtggtgttcctgaaagcaagttttatgccatctgctcctcgatagacaag
cttgacaaggtgtcttggaacgatgtgagacacgaaatggtgacaatgagaggcctggct
cctgaagtggctgatagagtcggggactatgtccagtgtcatggtggggtgtccctggta
gagcaaatgttccaggatccaaggttatctcagaacaagcaggccctaaagggcctcgag
gatctaaagctgctatttgaatatgtgactttatttggaattgctgagaagatctccttt
gacctaagccttgctcggggcctggactactatacaggagtgatctatgaagcagtgcta
ctacaggctccagctcaagcagagggcaaggccttgaatgtaggcagtgtggctgctggt
ggacgctatgatgggctggtgggcagttttggccacaaggtaccgtgtgtgggactcagc
attggagtggagcgaatcttctccattatggagcaacagatgaagacgtttggtgagaag
atacgaaccacagagacccaagtatttgttgccacaccacagaagggttttctccgggaa
cggttgaagctaattgcagagctttgggatgctgggatcaaggcagagctgctgtataag
aacaaccctaaactgctaactcagctgtcctactgtgagagcatggacattccactggtg
gccattattggagagcaggaactaaaggaaggagtcatcaagctccgttcagtggtcagc
agggaagaggtggctgttaaacgtgaaaaccttgtgattgaaattcagaagcgactatct
gaatcttaa
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