Sorex fumeus (smoky shrew): 130032751
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Entry
130032751 CDS
T10594
Symbol
FANCL
Name
(RefSeq) E3 ubiquitin-protein ligase FANCL isoform X1
KO
K10606
E3 ubiquitin-protein ligase FANCL [EC:
2.3.2.27
]
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum03460
Fanconi anemia pathway
sfum04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
130032751 (FANCL)
09124 Replication and repair
03460 Fanconi anemia pathway
130032751 (FANCL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sfum04121
]
130032751 (FANCL)
03400 DNA repair and recombination proteins [BR:
sfum03400
]
130032751 (FANCL)
Enzymes [BR:
sfum01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130032751 (FANCL)
Ubiquitin system [BR:
sfum04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130032751 (FANCL)
DNA repair and recombination proteins [BR:
sfum03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
130032751 (FANCL)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FANCL_d3
FANCL_C
FANCL_d1
FANCL_d2
zf-RING_2
SLX1_C
zf-RING-like
PHD_NSD
zf-HC5HC2H
Motif
Other DBs
NCBI-GeneID:
130032751
NCBI-ProteinID:
XP_055980284
LinkDB
All DBs
Position
Unknown
AA seq
373 aa
AA seq
DB search
MEAEANLLRQFPLLLPQNRARTVYEGFISAQGRDFHIKILLPGDLQLKNARLLCSWQLRT
ILSGYHQIIQQRMKHSPDLLSFMMELKMVLEAALKNKQELSIPPPPQFYSSVIEDLGVLG
WDKLVYVDSCFSTIKLKAEDASGREHLITLKLKPKYPAESPDAFVDFPVPFSFSWTPQSS
LLSIHSQFLTALESLKVFWDVMDEIDEKTWVLEPEKPTRSAKARRIVIGNNASINIDVDP
RHPTMLPECCFLGADHVTKPLGIKLSRNIHLWDPENTLLQNLKDVLEIDFPARAVLEKSD
FSMDCGICYAYQLDGAIPDQMCDNPKCGQPFHQICLYEWLRGLLTSRQSFNIIFGECPYC
SKPITLKMYGRKS
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggaagcgaacctgttgcgccagttcccgctccttctgccccagaaccgggcc
agaaccgtgtatgagggattcatttcggctcagggaagagatttccacattaaaatattg
ttgcctggagatttacaactgaaaaatgcaagattactatgcagttggcagctgagaaca
atacttagtggataccatcaaataatacaacagagaatgaagcactctcctgatctattg
agctttatgatggagttgaagatggtcttggaagctgctttaaagaacaaacaagagctc
tctattccacctcctccgcagttctactcaagtgttattgaagatctaggagttttgggt
tgggataaacttgtttatgtggattcttgcttcagtaccatcaagttaaaagctgaagat
gcttctggtagagagcatcttatcactctcaaattgaagccgaagtaccctgcagaatca
cctgatgcttttgtggattttccagtccctttttctttttcttggacaccacagagctct
ttattaagtattcatagtcagtttttgacagcattagaatcactgaaggtattttgggat
gttatggatgaaatcgatgagaagacttgggttcttgagccagaaaaacctacacggagt
gcgaaagcacgaaggattgtcatagggaataatgcttcaataaacattgacgtagaccct
cggcatccgacgatgcttcctgagtgctgttttcttggagcggatcatgtaacaaaaccc
ttgggaatcaagctgagcagaaacatacatttatgggatccagaaaatactctattacaa
aatttgaaagatgttttagaaattgattttccagctcgagctgtcctagaaaaatcagat
ttttctatggattgtggaatttgttatgcctatcaactggatggtgccattcccgatcaa
atgtgtgataatccaaagtgtggacaacctttccatcaaatatgcttatatgagtggttg
aggggactactgactagtagacagagttttaacatcatatttggtgaatgcccttactgt
agtaagccaattaccttgaaaatgtatgggaggaaatcctga
DBGET
integrated database retrieval system
