Sorex fumeus (smoky shrew): 130032769
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Entry
130032769 CDS
T10594
Symbol
SEMA6A
Name
(RefSeq) semaphorin-6A isoform X1
KO
K06842
semaphorin 6
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
130032769 (SEMA6A)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sema
PSI
DUF3481
Motif
Other DBs
NCBI-GeneID:
130032769
NCBI-ProteinID:
XP_055980317
LinkDB
All DBs
Position
Unknown
AA seq
1048 aa
AA seq
DB search
MRSEALLLYFTLLHCAGAGFPEDSEPISISHGNYTKQYPVFVGHKPGRNTTQRHRLDIQM
IMIMNRTLYIAARDHIYTVDIDTSHTEEIYCSKKLTWKSRQADVDTCRMKGKHKDECHNF
IKVLLKKNEETLFVCGTNAFNPSCRNYKMDTLEPLGDEFSGMARCPYDAKHANVALFADG
KLYSATVTDFLAIDAVIYRSLGDSPTLRTVKHDSKWLKEPYFVQAVDYGDYIYFFFREIA
VEYNTMGKVVFPRVAQVCKNDMGGSQRVLEKQWTSFLKARLNCSVPGDSHFYFNILQAVT
DVIRINGRDVVLATFSTPYNSIPGSAVCAYDMLDIASVFTGRFKEQKSPDSTWTPVPDER
VPKPRPGCCAGSSSLEKYTTSNEFPDDTLNFIKTHPLMDEAVPSIINKPWFLRTMVRYRL
TKIAVDTAAGPYQNHTVVFLGSEKGIILKFLARIGNSGFLNDSLFLEEMSVYNPEKCSYD
GVEDKRIMGMQLDKASSALFVAFSTCVIKVPLGRCERHGKCKKTCIASRDPYCGWVKEDG
ACAHLSPSSRLTFEQDIERGNTDGLGDCHNSFVALNDISTPLPDHEMSYNTVYGHSSSLL
PSTTTSDSAAREGFESRGGMMDWKDLLHSPDSTDSLGAVSSHNHQDKKGVIRESYLKGHD
QLVPVTLLAIAVILAFVMGAVFSGIVVYCVCDHRRKDGSAVPRKDKELAHSRRGSMSSVT
KLSGLFGDAQSKDPKPEAILTPLMHNGKLATPGSTAKMLIKADQHHLDLAALPTPESTPT
LQQKRKPSRGSREWERNQNLINACTKDMPPMGSPVIPTDLPLRASPSHIPSVVVLPITQQ
GYQHEYVDQPKMSEVAQMALEDQAATLEYKTIKDHLSSKSPNHGVNLVENLDSLPPKVPQ
REASLGPPGAPLSQNGLGKRLEMHHSASYGLDYKRSYPTNSLTRSHHQAATLKRNNTNSS
NSSHLSRNQSFGRGDNPPPAPQRVDSIQAHGSQPAGQAVTVSRQPSLNAYSSLTRAGLKR
TASLKPDVPPKPSFAPLSTSLKPNDACT
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgaggtcagaagccttgctgctctatttcacactgctacactgtgctggggctggcttc
ccagaagattctgagccaatcagtatttcgcatggcaactatacaaaacagtatccggtg
tttgtgggccacaagccaggacggaacaccacacagaggcaccgactggacatccagatg
attatgatcatgaaccgaaccctctacattgctgctagggaccatatttatactgttgat
atagacacatcacacacagaagaaatttattgtagcaaaaaactgacatggaaatctaga
caggctgatgtagacacgtgcagaatgaagggaaaacataaggacgagtgtcacaacttt
atcaaagttcttctaaagaaaaatgaggagaccctgtttgtctgtggaactaatgccttc
aacccttcctgcaggaactataagatggatactttggaacctttgggggacgaatttagt
ggaatggccagatgcccttatgatgccaaacatgccaacgttgcactatttgcagatgga
aaactttactcggccacggtgactgacttccttgctatcgatgcagtcatttatcggagt
cttggagacagcccaaccctacgaactgtcaagcatgattcaaaatggttgaaagaacca
tactttgtccaagccgtggattatggagattatatttacttcttcttcagggaaatagca
gtcgagtacaacacgatgggaaaggtcgttttcccacgggtcgctcaggtgtgcaagaat
gacatgggagggtcgcagcgcgtgctggagaagcagtggacctctttcttaaaggcgcgc
ctcaactgctccgtgcctggagactctcatttttatttcaacatacttcaggcggtcaca
gacgtgattcgtatcaatggccgtgatgttgttctggcaaccttttccacaccttataac
agcatccctggctctgccgtctgtgcctatgacatgctcgacattgccagtgttttcacc
gggagattcaaggaacagaagtctccggattccacctggaccccggtacccgacgagcgt
gtgcctaagcccaggccggggtgctgcgccggctcatcctccttagaaaagtacacgacc
tccaacgagtttccagatgacaccctgaacttcattaagacacaccccctcatggatgag
gccgtaccttccatcatcaacaagccgtggttcctgaggaccatggtgagataccgcctg
accaaaatcgctgtggacactgccgctgggccctatcagaatcacactgtggtttttctg
ggatccgagaagggaatcatcctcaagttcttggccaggataggaaacagtggtttcctc
aatgacagccttttcttggaggagatgagcgtttacaaccctgaaaagtgcagctatgat
ggcgtagaggacaagaggattatgggcatgcagctggacaaagccagcagtgctctgttc
gtcgccttctccacctgtgtgatcaaggttcccctcggccgctgtgaacgacacgggaaa
tgtaaaaaaacctgtattgcctccagagacccgtattgtgggtgggtcaaggaagatggt
gcctgcgcccatctgtcacccagcagcagactgacttttgaacaggacattgagcgaggc
aatacagatggcctgggagactgccacaattccttcgtggcactcaatgacatttcaact
cctctaccagatcatgaaatgtcttacaacacagtatatgggcactccagttccctcttg
ccgagcaccaccacgtcagactcggcggctcgcgagggctttgagtctaggggaggcatg
atggactggaaggatctgctccactcaccggacagcacagactctttgggggcagtgtcg
tcccataatcaccaagacaagaagggagtgattcgggaaagttacctcaaaggccacgac
cagctcgtcccggtcaccctcttggccatcgcggtcattctggccttcgtcatgggggcc
gtcttctcgggcatcgtcgtctactgcgtctgcgaccaccggcgcaaggacggctcggcc
gtgccgcgcaaggacaaggagctggcgcactcccgccgcggctccatgagcagcgtcacc
aagctcagcgggctcttcggcgacgcgcagtccaaggaccccaagcccgaggccatcctc
acgcccctcatgcacaacggcaagctggccacgccgggcagcacggccaagatgctcatc
aaggccgaccagcaccacctggacctggcggcgctgcccacgcccgagtccacgcccacg
ctgcagcagaagcgcaagcccagccgcggcagccgcgagtgggagcgcaaccagaacctc
atcaacgcctgcaccaaggacatgccccccatgggctcgccggtgatccccacggacctg
cccctgcgggcctcccccagccacatccccagcgtggtggtgctgcccatcacgcagcag
ggctaccagcacgaatacgtggaccagcccaagatgagcgaggtggcccagatggcgctg
gaggaccaggccgccaccctggagtataaaaccatcaaggaccacctcagcagcaagagt
cccaaccacggggtgaacctggtggagaacctggacagcctgccccccaaggtgccccag
agggaggcctccctggggcccccgggcgcccccctgtcccagaacggcctgggcaagcga
ctggagatgcatcactctgcctcctacgggctggactataagaggagctaccccacgaac
tcgctcacgagaagccaccaccaggccgccacgctcaaaagaaacaatactaactcctcc
aattcctcccacctctccaggaaccagagctttggccggggggacaacccgccccccgcc
ccgcagagggtggactccatccaggcgcacggctcgcagccggcgggccaggccgtgact
gtctccaggcagcccagcctcaacgcctacagctccctgacacgcgccgggctcaagcgc
acggcctcgctaaagcccgacgtgccccccaagccctctttcgctcccctttccacctcc
ctgaagcctaacgatgcgtgtacataa
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