Sorex fumeus (smoky shrew): 130032772
Help
Entry
130032772 CDS
T10594
Symbol
FAN1
Name
(RefSeq) fanconi-associated nuclease 1
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
130032772 (FAN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfum03400
]
130032772 (FAN1)
Enzymes [BR:
sfum01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
130032772 (FAN1)
DNA repair and recombination proteins [BR:
sfum03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
130032772 (FAN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FAN1_TPR
Fan1_SAP
VRR_NUC
FAN1_HTH
zf-WRNIP1_ubi
Motif
Other DBs
NCBI-GeneID:
130032772
NCBI-ProteinID:
XP_055980323
LinkDB
All DBs
Position
Unknown
AA seq
990 aa
AA seq
DB search
MAEGKSPQKKRPRRSLSASKTKTKGAPSIVSFFNNAPPAKFACPVCCQMVPRYDLNQHLD
QGCVGTAQPSTVDPGHLGSRTSKESTVDRSHVTSKQPPAETLVTPGQSESPPKGIKQKTS
PYFDRGNLTSPNRDEHGLPSVTVIPLGSLSSKLSRSYQKNKRCISEEEGFAQDSPPGASS
TARPCARNEEKNPAWENSSQKENLACDSPGYSSQVTVGESAAVSPRLVVSPHTPALSPQQ
APESLSPHLNLGTQLQAASEGALAEVASSDKVGTQEDVDGMGPSEAQARLEPLETDSHSP
ASGDAQEGPLRGDSSCQGGVSGPGPLEPVDGDGDLGVARVAPLDQPYYLQSFLLVLRTVF
EHEEDRTLFDAHEQAMVARFHQLSASGQKLYVRLFQRKLGWLKVSKLEYREIAPDLTPVV
RELEQAGFLQTESELQELSEVLELLSLPELKTLAKTFHLTSPGGQKQQLVDAFLRLARQP
SICAWDKTRPGISAVILKRAKALVGASLRVCQGPRAVFARTLLLFSPADSLEEEDSACGG
QGQLSTVLLVNLGRVAFPTYTVSRETRIFQDREDLIRYAAAAHLLSDVSSAMAAGSWPTA
LRLSQRAKEDWTALKDHPALRAHEQLPVFLRCYTVGWVYTRLASRRVEILQRLHMHEEAV
QELQSLLAQNVYCPDSRGRWWDRLALNLQQHLKRLEQAVEVIAAGLADPAVRTGHRLALW
QRAARLKESSSGRRFRQQLGQLPAVTVQDVKHVTITGRLCPQRGVAKSVFVMETGDPAAP
ATVLCSVEELALAFYRRSGFDQGIHGEGSTFCTLYGLLLWDEIFMDGVPDVFRSPYQASP
LDLCTDSFFASRAAALEARLEQLHRAPAERLQAWLAATWQAQEGRAASVVSWERFASLQQ
AQDLVSCLGGTVLSGVFRRLAEDFRHCRGGLPDLVVWSSRDRRCKLVEVKGPSDRLSAKQ
MIWLDELQKLGADVEVCHVTAVGAKGHGLT
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagggaaatctccccagaaaaagagaccccggagaagtttatccgccagtaaa
actaaaacaaagggcgcaccctccattgtctctttttttaacaatgcgcctcctgccaag
tttgcctgccccgtttgctgccagatggtgccgagatatgacttaaaccagcacctggac
caggggtgtgtgggcactgctcagcccagcaccgtggaccccgggcatcttggttcaagg
acttcaaaggaatccaccgtggatcggagccatgtcacctccaaacagcccccagcagag
acactagtgacccctggccagagcgaatcccctccaaagggcatcaaacagaaaaccagc
ccctactttgatcgtggtaacttgacatccccaaaccgtgacgagcatggacttcctagc
gtgacagtcatccctctgggcagtctgtcctccaaactgtccagaagctaccaaaaaaac
aagaggtgcatctccgaggaagaaggatttgcccaggacagccctccaggtgcatcttcc
acggccaggccttgcgccaggaacgaagagaagaatccagcttgggagaacagttcacag
aaggaaaaccttgcatgtgattctccagggtacagctcacaggtgacggttggggaaagt
gcagctgtgtccccaaggctggtggtgtctccccacacccctgccttgagtccccagcag
gcacctgagtctctctccccacatttaaatcttgggactcagctccaggctgcttcagag
ggtgctctggctgaagtggccagctcagacaaggtggggacccaggaagatgttgatggc
atgggaccttcagaagctcaggcgcgtctggaacctttggagacggattctcatagccct
gcatctggcgatgcccaagaaggccctctgagaggggacagcagctgccagggtggtgta
tctggccctggccctttggaaccggtcgatggtgatggggatctaggtgtggctagggtc
gccccattggaccagccttactacctgcagagtttcctcctggtgctgaggaccgtgttt
gagcatgaagaagacaggacactctttgacgcacatgagcaggccatggtggcccggttc
caccaactctcagcgagtgggcagaaactgtacgtgaggcttttccagcgcaagttgggc
tggctgaaggtgagcaagctggagtaccgggagatcgcgcccgacctgacccctgtggtc
cgggagctggagcaagccggcttcttgcagacagaatctgagttgcaagaactctcagaa
gtgcttgagctactttcccttcctgaactaaaaaccttggccaagacgttccatctgacg
agccccggtgggcagaagcagcagctggtggatgccttcctcaggctggcacggcagccg
tccatctgtgcctgggacaagacccggcctggaatcagcgcagtcattctcaaaagagcg
aaagcgctggtgggagcgtccttgcgggtatgtcagggccctcgggccgtgtttgcccgc
accctgctgctcttctctcctgccgactccctggaggaggaggattctgcctgtggtggc
caggggcaactgtccactgtgctgttggtcaacctcggccgtgtggcgtttcccacctac
accgtcagccgggagacgcggatcttccaggacagggaggacctcatccggtatgcagcc
gctgcacacctgctgagtgacgtcagctctgccatggccgccggcagctggcccactgcg
ctccgcctctcccagcgtgccaaggaggactggacggccttgaaggaccaccctgccctc
agagcccatgagcagctgcccgtcttcctgcgctgctacaccgtaggctgggtctacacc
cgccttgcgtctcggcgtgtggagatcctgcagcgcctccacatgcatgaggaagccgtc
caggagctgcagagtctcctggcacagaacgtgtattgtccagacagcaggggccggtgg
tgggaccggctggctctgaacctgcagcagcacctcaaacgtttagaacaggctgtggag
gtcattgcagcaggcctggcggacccagcagtgcggacgggtcatcgcttggcactctgg
cagcgggctgcacgcctcaaggagtcttcgagcggccgcaggttccgacagcagcttggg
cagctgccagcagtcactgtgcaggatgtcaaacatgtgaccatcacgggccggctgtgc
ccgcagcgtggggtggccaagtcggtgtttgtgatggagacgggagaccctgctgccccc
gccaccgtcctgtgttcggtggaggagctcgctctggccttctacagacgcagcggcttc
gaccagggcatccatggggaaggctccaccttctgcacgctctatggcctcctgctgtgg
gatgagatcttcatggatggggtcccagacgtcttccgtagcccttatcaggcctcccca
ctggacctgtgcactgacagcttcttcgcgagccgggcagcagccctggaggcccggctg
gagcagctgcaccgtgccccggccgagcgcttgcaggcctggctggcagccacgtggcag
gcccaggagggccgggcagcatcggtggtcagctgggagcgcttcgcatccctccagcaa
gcacaggacctggtgtcctgcctggggggcacggtgctgagtggcgtgttcaggcgcctg
gcggaggacttccggcactgccgagggggtctgccagacctggtggtgtggagctcccgg
gaccgtcgctgtaagttggtggaagtcaaaggccccagtgaccggctctccgcaaagcag
atgatctggctggatgagctgcagaagttgggtgcggacgtggaggtctgtcatgtgact
gcagtgggcgccaagggccacgggctcacgtga
DBGET
integrated database retrieval system
