Sorex fumeus (smoky shrew): 130032791
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Entry
130032791 CDS
T10594
Name
(RefSeq) core histone macro-H2A.1 isoform X1
KO
K11251
histone H2A
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum03082
ATP-dependent chromatin remodeling
sfum04217
Necroptosis
sfum04613
Neutrophil extracellular trap formation
sfum05034
Alcoholism
sfum05322
Systemic lupus erythematosus
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
130032791
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
130032791
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
130032791
09160 Human Diseases
09163 Immune disease
05322 Systemic lupus erythematosus
130032791
09165 Substance dependence
05034 Alcoholism
130032791
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sfum03036
]
130032791
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sfum04147
]
130032791
Chromosome and associated proteins [BR:
sfum03036
]
Eukaryotic type
Nucleosome assembly factors
Histones
130032791
Exosome [BR:
sfum04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
130032791
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Macro
Histone_H2A_C
Histone
CBFD_NFYB_HMF
DUF1764
Clp_N
Motif
Other DBs
NCBI-GeneID:
130032791
NCBI-ProteinID:
XP_055980353
LinkDB
All DBs
Position
Unknown
AA seq
372 aa
AA seq
DB search
MSSRGGKKKSTKTSRSAKAGVIFPVGRMLRYIKKGHPKYRIGVGAPVYMAAVLEYLTAEI
LELAGNAARDNKKGRVTPRHILLAVANDEELNQLLKGVTIASGGVLPNIHPELLAKKRGS
KGKLEAIITPPPAKKAKSPSQKKPVSKKTGGKKGARKSKKKQGEVSKAASADSTTEGTPA
DGFTVLSTKSLFLGQKLNLIHSEISNLAGFEVEAIINPTNADIDLKDDLGNTLEKKGGKE
FVEAVLELRKKNGPLEVAGAAVSAGHGLPAKFVIHCNSPVWGADKCEELLEKTVKNCLAL
ADDKKLKSIAFPSIGSGRNGFPKQTAAQLILKAISSYFVSTMSSSIKTVYFVLFDSESIG
IYVQEMAKLDAN
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagccggggagggaagaagaagtctaccaaaacctcccggtccgccaaggcggga
gtcatcttccctgtggggcggatgctgcggtacatcaagaaaggccaccccaagtacagg
atcggagtgggggcccccgtgtacatggctgctgtcctggaatacctgacagcggaaatt
ttggagctggctggcaatgcggcgagagacaacaagaaggggcgggtcacgccccggcac
atcctgctggctgtggccaatgatgaagagctgaatcagctgctaaaaggagtcaccatt
gccagtgggggggtgctgcccaacatccaccccgagttgctagcaaagaaacgaggatcg
aaagggaagttggaagccatcatcacaccacccccagccaaaaaggccaagtctccatcg
cagaagaagcctgtgtcgaagaaaacaggaggcaagaaaggggcccggaaatccaagaag
aagcagggagaagtcagcaaggcggccagcgccgacagcacaaccgagggcacgcccgcc
gacggcttcacggtcctctccaccaagagcctgttcctcggccagaagctgaaccttatt
cacagtgaaatcagtaatttagccggctttgaggtggaggccataatcaatcctaccaat
gctgacattgaccttaaagatgacctaggaaatacgctggagaagaaaggtggcaaagag
tttgtggaagcagttctggaactccggaaaaagaacgggcccttggaagtggctggagct
gcggtcagtgcaggccacggcctgcccgccaagttcgtgattcactgtaacagccccgta
tggggtgcagacaagtgtgaggaacttctggaaaagacagtgaagaactgcttggcactg
gctgacgataagaagctgaagtccatcgccttcccatccattggcagcggcaggaatggc
ttcccgaagcagacggcggcacagctgatcctgaaagccatctccagttacttcgtgtcc
accatgtcttcctccatcaagacggtgtacttcgtgctcttcgatagcgagagtataggc
atctatgtgcaggaaatggccaagctggacgccaactag
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