Sorex fumeus (smoky shrew): 130032803
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Entry
130032803 CDS
T10594
Name
(RefSeq) protocadherin beta-2-like
KO
K16494
protocadherin beta
Organism
sfum Sorex fumeus (smoky shrew)
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sfum04515
]
130032803
Cell adhesion molecules [BR:
sfum04515
]
Cadherins
Protocadherins
130032803
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
130032803
NCBI-ProteinID:
XP_055980372
LinkDB
All DBs
Position
Unknown
AA seq
797 aa
AA seq
DB search
MEAGEEKECFRKQRQVLILFLCLGIAHAGSQRRLYLVTEEMESGSFVTNLLKDLGLEADD
ITARAPHVVSKGKKMRLQLDSQTGDLLLNEKLDREELCGRIEPCVLPFQVLLENPLQFFQ
AELQVMDINDHSPVFLDQEITLKISESISPGTTFLMEHAQDLDVGNNSLKSYTVSPNSYF
HLKLQESPDGIILPQLVLDKALDREHQPEIRLILTAIDGGSPPRSGTALVRVEILDINDN
APEFAKLLYEVQIPENSPIGSQVAIVSARDLDLGVYGEISYVLFQASEDIRKTFRINAKS
GELLLIQELDFEFIKSYTVNIQAIDGGGLSGSCIVFVQVMDLNDNPPELTISTLNTEIPE
NLQETIIAVFSVSDPDSGYNGRTVCSIQDDIPFFLKPSVENFYTLLTNTALDRESQAEYN
ITITVTDMGTPRLQTKHTITVLVSDVNDNAPAFSQPSYTLLVGENNSPALHIGSVSATDP
DAGSNAQVTYSLLPSQDPQLPLASLVSINADNGQLFALRSLDFEAVRAFEFGVGAWDRGS
PALSSQARVRVLVLDRNDNAPFVLYPLQNASAPCSELVPRAAEAGYLVTKVVAVDGDSGQ
NAWLSFQLLKATEPGLFSVWAHNGEVRTARPLSERDAPKHRLLVLVRDNGEPPLSASVTL
HMLLVDGFSQPFLPLPDAPPDAPPDDLLTVYLVVALACVSSLFLFSVLAFVTVRLCRRAG
PPAGVPYPLPDAHFPGHLLDVSGAGTLSHSYQYEVCLAGGAGTNEFNFLKPIFPNILGQD
LGKESEGNSTLENSLGI
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atggaggctggagaggaaaaggaatgctttcggaaacaaaggcaagtcctgatactcttt
ctttgtctgggcatagctcatgctggttctcagcgtaggctttatttagtgactgaggag
atggagagtggttcctttgtgaccaatttgttaaaagatctggggttggaggcagatgat
ataactgcacgggccccccatgtcgtttccaaagggaaaaaaatgcgtttgcaattggat
tcacagactggggatttgttgttaaatgagaaactggaccgggaggaactgtgtggccgg
attgagccctgtgtactacctttccaggtgttgttggaaaatcccttgcagttttttcaa
gccgagctacaggttatggatataaatgatcattctccagttttcctagaccaagaaata
actttgaaaatatccgaaagtatctcacccggaactactttcttaatggaacatgcacag
gacttagatgtaggaaacaacagtctcaaaagttatacagtcagccccaattcctacttt
catcttaaattacaagaaagtcctgatggcataattttaccacaattggtgctggacaaa
gcattagatcgagaacatcagcctgaaatcagattaatactcactgcgatcgatggcggt
tcaccccccaggtctggcactgctctggtccgagttgaaattttggacatcaatgataac
gcccccgagtttgcaaaactgctctatgaggtgcagatcccagaaaacagccccattgga
tcccaggttgccattgtttctgctagggatttggatttgggagtgtatggagaaatatct
tacgtattatttcaagcctctgaagacattcgcaaaacttttagaataaatgcaaaatca
ggagaacttcttttaatacaggaactggattttgaattcattaagagttatacagtaaat
attcaggccatagatggtgggggactttctggaagttgtatagtgtttgttcaagtgatg
gacctgaatgacaaccccccggaactgaccatatcaacacttaatactgagataccagaa
aacttgcaggagaccataattgctgtgttcagtgtttcagatcctgactccggttataat
ggaagaactgtatgttccatccaagacgatattcctttctttcttaaaccatccgttgag
aatttttacactctattgacaaacacagcactggaccgagagagccaggcagagtacaac
atcaccatcacggtgacagacatgggcacccccaggctgcaaacaaagcacaccatcaca
gtgctagtttccgatgtgaacgacaacgcccccgccttcagccagccctcttacaccctg
ctggtgggcgagaacaacagccctgcactgcacataggcagcgtgagcgccactgaccct
gacgcgggcagcaacgcccaggtgacctactcgctgctgccttcccaagacccacagctg
ccactcgcctcgctggtgtccatcaacgccgacaacgggcagctgttcgcgctgcgctcg
ctggacttcgaggccgtgcgcgccttcgagttcggcgtgggcgcgtgggaccgcggctcg
cccgcgctcagcagccaggcgcgggtgcgcgtgctggtgctggaccgcaatgacaacgcg
cccttcgtgctgtacccgctgcagaacgcgtcggcgccctgcagcgagctggtgcccagg
gcggcagaggcgggctacctggtaaccaaggtggtggcggtggatggagactcgggccag
aacgcctggctgtctttccagctgctcaaggccacggagcccgggctcttcagcgtgtgg
gcgcacaatggcgaggtgcgcactgcgcggccgctcagcgaacgcgacgcgcccaagcac
aggctgctggtgctggtcagggacaatggcgagccgccactgtcggccagcgtcacgctg
cacatgctgctggtggatggcttctcgcagcccttcctgccactgcccgacgcgccgccc
gacgcgcctcccgatgacctcctcaccgtctacctggtggtggccttggcctgcgtgtcg
tcgctcttcctcttctccgtgctggccttcgtgaccgtgcgcctgtgccggcgggccggc
ccgcccgcgggggtcccctacccgctgccggacgcgcacttcccgggacacctgctggac
gtcagtggtgctgggaccctgtcgcacagctaccagtatgaggtgtgtctggcggggggc
gctggcactaatgagtttaatttcctcaagcctattttccccaatattctaggtcaggac
cttgggaaggagtcagagggaaattcaactttagaaaatagtttaggtatttga
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