Sorex fumeus (smoky shrew): 130032818
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Entry
130032818 CDS
T10594
Symbol
TGFBRAP1
Name
(RefSeq) transforming growth factor-beta receptor-associated protein 1
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04148
Efferocytosis
Brite
Membrane trafficking [BR:
sfum04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
130032818 (TGFBRAP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
Clathrin
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
130032818
NCBI-ProteinID:
XP_055980392
LinkDB
All DBs
Position
Unknown
AA seq
853 aa
AA seq
DB search
MTTKAFTLVPAVERELLMGDKERVNIECVECCGKNLYVGTSDGFIVHFLLEEQPQPAGTA
TFTATRQLRRHLGSRKPVEELRAASALSRLLVLCESCITLLHMTSLEPVPSGARIKGAVA
FSLNENPVSGDPFCVEVCIISTKRRTIQLFLVYEDRVQIVREVPTPEQPVAVAVDGHFLC
LALTTQYIILNYSTGTSQDLFPYCSEEKRPIVKRIGRQEFLLAGPGGLGMFATVAGISQR
APVRWSENVIGAAICFPYVIALDNEFITVHSMLDQQQKQTLPFKEGHILQDFEGRVIVTT
SKGVYILVPLPLEMQIQDLLANRRVEEALVLAKGARRNIPKEKFQVMYRRILQQAGFIQF
AQLQFLEAKELFRSGQLDVRELISLYPFLLPTSSSFTRSHPPLHEYADLNQLTQGDQEKV
AKCKRFLMSYLNEVRSTEGANGYKEDVDTALLKLYAEADHDSLLDLLVTENSCLLSDSAA
WLEKHRKYFALGLLYHYNKQDAAAVQLWVNIVNGDVQDATRTDLYEYVVDFLTYSLDQEL
VWKYADWVLQKSQEVGVKVFTERPLDEQQNSFNPNDIITCLNKYPKALVKYLEHLVMDQR
LQREEFHTRLALLYLDQVLQQRPPDGGPGAEAPEVQKKLRLLLQRSDLYRVHFLLERVRG
AGLPLERAILHGKLEEHAEALRILVLELQDFTAAEDYCTWRSEGRDPAYRQRLFHSLLSL
YLGAELSVAAADLLNRHAAEFDAAQVLPQLPGTWSVQLLCPFLMGAVRDSVHSGRNAQVA
VGLARAENRIYKYEKMKLKGSSVRLSDKKLCQMCQNPFCEPVFVRYPNGGLVHTHCAAGR
HRSPSPPTPGPRT
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccaaggccttcacgctggtccctgcagtggagcgggagctgctgatgggcgac
aaggagcgagtgaacatcgagtgcgtggaatgctgcggcaagaacctctacgtgggcacc
agcgatggcttcatcgtccactttctgctggaggagcagccgcagcccgcgggcacggcc
accttcacggccaccaggcagctgcgccggcacctgggttccaggaagccggtggaggag
ctgcgggcagcgtcggccctcagccggctgctggtgctctgcgagagctgcatcacgctg
ctgcacatgacgagcctggagcccgtgccctcgggagcccgcatcaagggggcggtggcc
ttctcgctgaacgagaaccccgtgagtggggaccccttctgcgtggaggtctgcatcatc
tccaccaagcgcaggaccatccagctcttcctggtgtacgaggaccgcgtgcagatcgtc
agggaggtgcccacccccgagcagcccgtggccgtggctgtggacggccacttcttgtgc
ctggccctgaccacccagtacatcatcctcaactatagcacaggcacctcgcaggacctg
ttcccctactgcagtgaggagaagcgccccattgttaagcggattgggcgacaggagttc
ctgctggcgggccctggggggttaggcatgtttgccaccgtggctggaatatctcagcgt
gcgcccgtgcgctggtcagagaatgtgatcggggcagccatctgtttcccgtacgtcata
gccctggacaacgaattcatcacagtccacagcatgctggaccagcagcagaagcagacc
ctgcccttcaaggaaggccacattctacaggatttcgaaggaagagtgattgtcaccacg
agtaaaggagtttacatcttggttccattacctctggagatgcaaatccaggatctcctc
gccaaccggagagtggaggaggcgctggtgttagccaaaggagctcggaggaacatccca
aaagagaagtttcaggtcatgtacagacggatcctgcagcaggcgggcttcatacagttc
gcacagcttcagtttctggaagccaaagagctcttcagaagcggccagcttgacgtccgg
gagctgatctctctctaccccttcctgttgcccacctcctcttcattcacacggtctcac
ccgcctctccacgagtatgcagacctcaaccagctgacccagggggaccaggagaaggtg
gccaagtgcaagcgcttcctcatgagctacctgaacgaagtccgcagcacggagggcgcc
aacggctataaggaggacgtggacacggccttactcaagctctacgccgaggcggaccac
gacagcctgctggacctgctggtcaccgagaactcctgcctgctgagcgacagtgccgcc
tggctggagaagcaccgcaagtatttcgccctggggctgctctatcactataataaacaa
gacgcagccgctgtccagctatgggtgaacatcgtgaatggggacgtgcaggacgccacc
cgcacggacctgtatgagtatgtcgtcgattttctcacctacagcttggaccaggagctc
gtgtggaagtatgctgactgggtcttacagaaaagccaggaggtcggagttaaagtgttc
actgagagaccattggatgaacagcagaacagtttcaatcccaacgatatcatcacttgc
cttaacaaataccccaaagcccttgtcaagtacctggaacatctagttatggaccagaga
ctacagagggaagagttccacacgcgcctcgcactcctctacctagatcaggtactgcag
cagcggcctccggatggtggccccggggcagaggcccccgaggtgcaaaagaagctccgc
ctcctgctccagagatccgacctatacagagtccactttctgctagagcgggtgcgcggg
gccgggctgcccctggagcgcgccatcctgcatgggaagctggaggagcacgccgaggcg
ctgcgcatcctggtgctggagctgcaggatttcactgcggcagaggactactgcacgtgg
cgctcggagggccgcgaccccgcctaccgccagcgcctcttccactcgctgctcagcctc
tacctgggcgccgagctgtcggtggccgccgccgacctcctgaatcgccacgcggccgag
ttcgacgcggcgcaggtgctgccgcagctgccgggcacctggtcggtgcagctgctctgc
ccgttcctgatgggcgccgtgcgggacagcgtgcacagcggcaggaacgcgcaagtcgcc
gtgggcctggcccgcgccgagaaccggatctacaagtacgagaagatgaagctgaaagga
agctcggttcggctctcagacaaaaagctttgccagatgtgccagaatcccttttgtgag
cccgtgtttgtcagataccctaatggtggccttgtgcacacccattgtgcagctggcaga
caccggagccccagcccgcccacccctggccctcggacttga
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