Sorex fumeus (smoky shrew): 130032819
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Entry
130032819 CDS
T10594
Name
(RefSeq) protocadherin beta-14-like
KO
K16494
protocadherin beta
Organism
sfum Sorex fumeus (smoky shrew)
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sfum04515
]
130032819
Cell adhesion molecules [BR:
sfum04515
]
Cadherins
Protocadherins
130032819
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Peptidase_S55
Motif
Other DBs
NCBI-GeneID:
130032819
NCBI-ProteinID:
XP_055980389
LinkDB
All DBs
Position
Unknown
AA seq
798 aa
AA seq
DB search
MKSREAFSLWKRQVLILFVFLRLSRVCSESVRYSVAEETEVGFRVANLINDLGLGVEELS
SREARVVSDDNKKHLHLDLLTGDLFLNEKLDREELCGSIEPCMLHFQVVLENPLQFFQAE
LHVRDINDHSPIFLDKEILLKISESTTIGTTFLMESAQDLDIGRNSLQNYSVSPNSHFQI
KTQDTGDGKIYPELVLNKELDHEEQPELRLTLTALDGGSPPKSGTTLILIKVLDINDNVP
AFPLTLYKVEVQEDTSVGSWIITISAKDLDTGIYGKISYTFLHASEDIRKTFKIDSVSGE
IHLISHLDFEEIQLYAINVQATDGGGLSEECTLMVKVIDINDNPPEITITSITKTIPENS
SENLVALFSVRDKDAGENGRTICSIQDDIPFYLKPTFKNFFTLVSEKELDRESQAEYNIT
ITVTDMGTPRLQTQHTIRVLVSDMNDNAPTFSQPSYTLLVGENNSPALHIGSVSATDPDA
GSNAQVIYSLLPSQDPQLPLASLVSINADNGQLFALRSLDFEAVRTFEFGVGAWDRGSPA
LSSQARVRVLVLDRNDNAPFVLYPLQNASAPCSELVPRAAEAGYLVTKVVAVDGDSGQNA
WLSFQLLKATEPGLFSVWAHNGEVRTARPLSERDAPKHRLLVLVRDNGEPPLSASVTLHV
LLVDGFSQPFLPLPDASLDAPPDDRLTVYLVVALACVSSLFLFSVLAFVTVCLCQRASPP
AGGSYPLPDAHFPGHLLDVSGAGTLLHSYQYEVCLAEGAGANEFKFLKPLIPNLPFQDTG
SDVEETINFQNSFGVNIQ
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgaagagcagagaggcattcagtctgtggaaaaggcaagtcctaattctctttgttttt
ctgagattgtcccgggtatgttctgaatctgtgcgatattctgtggcagaggaaacagaa
gttggctttcgtgtggccaatctgataaatgatctggggttaggggtagaggagctgtct
tcaagggaggcccgggtggtatctgatgataataaaaagcatttgcatcttgatttgctg
actggagatttgtttttaaatgagaaactggacagagaagaactgtgtggctccatagag
ccttgtatgttgcattttcaggtagtgttggaaaaccctttacagtttttccaggctgag
ctgcatgtgagagatataaatgatcattcccctatattcctggacaaggaaatacttttg
aaaatatcagaaagcaccactataggaaccacattcttaatggagagtgctcaagatttg
gatataggaagaaacagtctacaaaattattcagttagccccaattctcattttcaaata
aaaactcaagacactggtgatggaaaaatttacccagaactagtcctgaacaaagaatta
gatcatgaggaacaacctgagctcagattaacactcacagcactggacggtggctcccca
cccaaatctgggacaacattgattctcattaaggtcttggatataaatgataatgttcca
gcatttccgttgacactctataaggtggaggttcaggaggacacatcagttggttcctgg
attatcaccatctctgctaaggatttggatacaggaatttatgggaaaatatcttacaca
tttttgcatgcatcagaagatattcgtaaaacgtttaaaattgatagtgtatctggggaa
attcatttgatatcacacttggattttgaagaaatacagctctatgccataaatgttcag
gcaacagatggtggaggactttcagaagaatgcactcttatggttaaagtgatagatata
aatgacaacccaccagaaattaccataacatcaataacaaagacaattcctgagaactcc
tctgagaatcttgtggctctgtttagtgttcgagacaaagacgctggtgaaaatgggagg
actatttgctctattcaagatgacatccccttttatctgaaacctaccttcaagaatttt
ttcactctagtttccgaaaaagaactggaccgagagagccaggcagagtacaacatcacc
atcacggtgacagacatgggcaccccaaggctgcaaacacagcacaccatcagagtgctg
gtgtccgacatgaacgacaatgccccaaccttcagccagccctcctacaccctgctagtg
ggtgaaaacaacagccctgcactgcacataggcagcgtgagcgccactgaccccgacgca
ggtagcaacgcccaggtgatctactcgctgctgccttcccaagacccgcagctgccactc
gcctcgctggtgtccatcaacgccgacaatgggcagctgttcgcgctgcgctcgctagac
ttcgaggccgtgcgcaccttcgagttcggcgtgggcgcgtgggaccgcggctcgcccgcg
ctcagcagccaggcgcgggtgcgcgtgctggtgctggaccgcaatgacaacgcgcccttc
gtgctgtacccgctgcagaacgcctcggcgccttgcagcgagctggtgcccagggcggca
gaggcgggctacctggtgaccaaagtggtggcggtggacggcgactcgggccagaacgcc
tggctgtcgttccagctgctcaaggccacggagcccgggctcttcagcgtgtgggcgcac
aatggcgaggtgcgcactgcgcggccgctcagcgagcgcgacgcgcccaagcacaggctg
ctggtgctggtcagggacaatggcgagccgccgctgtcggccagcgtcacgctgcacgtg
ctgctggtggacggcttctcgcagcccttcctgccgctgcccgacgcgtcgctagacgcg
cctcccgacgaccgcctcacagtgtacctggtggtggccttggcctgcgtgtcgtcgctc
ttcctcttctccgtgctggccttcgtgaccgtgtgcctgtgccagcgggccagcccgccc
gcggggggctcctatccgctgcccgacgcgcacttcccaggacacctgctggacgtcagt
ggtgctgggaccctgttgcacagctaccagtatgaggtgtgtctggccgagggcgctggc
gctaatgagttcaagtttctgaaaccacttatccccaatcttccatttcaggacactggt
agtgatgtagaggagaccataaactttcagaatagttttggagttaacattcaataa
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