Sorex fumeus (smoky shrew): 130032824
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Entry
130032824 CDS
T10594
Symbol
CYFIP1
Name
(RefSeq) LOW QUALITY PROTEIN: cytoplasmic FMR1-interacting protein 1
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04810
Regulation of actin cytoskeleton
sfum05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
130032824 (CYFIP1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
130032824 (CYFIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfum03019
]
130032824 (CYFIP1)
Messenger RNA biogenesis [BR:
sfum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
130032824 (CYFIP1)
Factors involved in mRNA localization
Other mRNA localization factors
130032824 (CYFIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
Cypovirus_WIV_4
Motif
Other DBs
NCBI-GeneID:
130032824
NCBI-ProteinID:
XP_055980395
LinkDB
All DBs
Position
Unknown
AA seq
1371 aa
AA seq
DB search
MAAQVTLEDALSNVDLLEELPLPDQQPCIEPPPSSLLYQPNFNTNFEDRNAFVTGIARYI
EQATVHSSMNEMLEEGQEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
KLMNFMYFQRTAIERFCGEVRRLCHAERRKDFVSEAYLITLGKFINMFAVLDELKNMKCS
VKNDHSAYKRAAQFLRKMADPQSIQESQNLSMFLANHNKITQSLQQQLEVIAGYEELLAD
IVNLCVDYYENRMYLTPSEKHMLLKVMGFGLYLMDGSVSNIYKLDAKKRINLSKIDKYFK
QLQVVPLFGDMQIELARYIKTSAHYEENKSRWTCTSSGSSPQYNICEQMLQIREDHMRFI
SELARYSNSEVVTGSGRQEAQKTDTEYRKLFDLALQGLQLLSQWSAHVMEVYSWKLVHPT
DKYSNKDCPDNAEEYERATRYNYTSEEKFALVEVIAMIKGLQVLMGRMESVFNHAIRHTV
YAALQDFAQVTLREPLRQAIKKKKNVIQSVLQAIRKTVCDWETGHEPFNDPALRGEKDPK
SGFDIKVPRRAVGPSSTQLYLVRTMAESLSSAELLRQLRSLGLERLLHVVNAFLRQSYTY
PPLLAFGGKMSFLLRVTFAAQRRTAPPDPSLAPSPAGRPRQAGRGGAGGLCRRGSAXVAN
GLCVFSPPPMFPRITQLYMVRTMLESLIADKSGSKKTLRSSLEGPTILDIEKFHRESFFY
THLINFSETLQQCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEASMME
YVLYSLDLYNDSAHYALTRFNKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKVMAGSLL
LDKRLRSECKNQGATIHLPPSNRYETLLKQRHVQLLGRSIDLNRLITQRVSAAMYKSLEL
AIGRFESEDLTSVVELDGLLEINRMTHKLLSRYLTLDSFDAMFREANHNVSAPYGRITLH
VFWELNYDFLPNYCYNGSTNRFVRTVLPLSQEFQRDKQPNAQPQYLHGSKALNLAYSSIY
SSYRNFVGPPHFQVICRLLGYQGIAVVMEELLKVVKSLLQGTILQYVKTLMEVMPKICRL
PRHEYGSPGILEFFHHQLKDIVEYAELKTVCFQNLREVGNAVLFCLLVEQSLSLEEVCDL
LHAAPFQNILPRVHVKEGERLDAKMKRLESKYAPLHLVPLIERLGTPQQIAIAREGDLLT
KERLCCGLSMFEVILTRIRTFLDDPIWRGPLPSNGVMHVDECVEFHRLWSAMQFVYCIPV
GTHEFTVEQCFGDGLHWAGCMVIVLLGQQRRFAVLDFCYHLLKVQKHDGKDEIIKNVPLK
KMVERIRKFQILNDEIITILDKYLKSGDGESTPVEHVRCFQPPIHQSLASS
NT seq
4116 nt
NT seq
+upstream
nt +downstream
nt
atggcggcccaggtgacgctggaggacgccctgtccaacgtggacctgctggaggagctg
cccctgccggaccagcagccctgcatcgagcccccgccctcctcactgctttaccagcca
aacttcaacacaaactttgaagaccgaaatgcgtttgtcactggcatcgcgagatacatc
gagcaagccacagttcactcaagcatgaatgagatgcttgaagaaggccaagagtacgcc
gtcatgctgtacacctggaggagctgttcccgggccatcccgcaggtgaaatgtaatgag
cagcccaacagagtggaaatctacgagaagaccgtggaggtcctggagcctgaggtcacc
aaactgatgaatttcatgtacttccagagaaccgccatcgagcgcttctgtggggaggtg
cggcggctgtgccacgcggagcgcaggaaggactttgtgtccgaagcatatctgatcacg
ctgggcaagttcatcaacatgttcgccgtgctggacgagctcaagaacatgaagtgcagt
gtgaagaacgaccactcggcctacaagagggcggcgcagttcttgcggaagatggcagac
ccgcagtccatccaggagtcgcagaacctgtccatgttcctggccaatcacaacaagatc
acgcagtccctgcagcagcagctcgaggtgatcgctggctatgaggagctgctggccgac
atcgtcaacctgtgcgtggactactatgagaacaggatgtacctgacgcccagcgagaag
cacatgctgctcaaggtcatggggttcggcctgtacctgatggatgggagtgtcagcaac
atctataagctggatgccaagaaaaggatcaacttgtcgaagatcgataagtacttcaag
caactccaggtggttccgctgtttggggacatgcaaatagaactggcaagatacatcaag
accagcgcgcactacgaggagaacaaatctcggtggacatgcacgtcatcaggcagtagc
ccccagtacaacatctgtgagcagatgctccagatccgggaggaccacatgcgcttcatc
tcggagctggcgcgctacagcaacagcgaggttgtcacgggctcaggccgccaggaggcc
caaaagaccgacactgagtaccggaagctgttcgacctggcgctgcagggcctgcagctg
ctgtcacaatggagtgcccacgtcatggaagtgtactcctggaagctcgtgcacccgacc
gacaagtactccaacaaagactgccccgacaacgctgaggagtacgagagagccacccgc
tacaactacaccagcgaggagaagttcgccctggtggaggtcatcgccatgatcaaaggg
ttgcaggtactgatgggcaggatggagagcgtgttcaaccacgccatccggcacaccgtc
tacgccgcactgcaggatttcgcgcaagtgacactgcgggagccgctgcggcaggccatc
aagaagaagaagaatgtcatccagagtgtcctgcaggccatcaggaagacagtgtgtgac
tgggagacggggcacgagccctttaacgaccctgccctgcgtggcgagaaggaccccaag
agcggcttcgacatcaaagtgccccgacgcgccgtgggcccctccagcacgcagctgtac
ctggtgcgcaccatggccgagtctctgagctctgccgagctgctcaggcagctcaggtct
ctgggcttggaaaggctcttgcatgtggtaaacgcgtttctgaggcagtcctacacctat
ccacctctgttagccttcggtggtaagatgtccttccttcttcgggtgacatttgcggcc
cagaggcggacggccccgccagacccgagcctggcgcccagccccgcgggccggccccgg
caggcagggcgaggtggcgccggaggcctctgccgccgtgggagtgcgnncgtcgctaat
ggcctgtgtgtattctctcctccgccgatgtttccccggataacgcagctttacatggtg
agaaccatgctagagtccctcattgcagacaaaagtggttccaagaaaaccctgagaagt
agccttgaggggcccaccatattggacatagaaaaattccaccgcgagtccttcttctac
acgcacttgatcaatttcagcgagacgctccagcagtgctgcgacctctcgcagctgtgg
ttccgcgagttcttcctggagctgacgatgggcagaagaatccagttccccattgagatg
tccatgccctggatcctcacggaccacatcctggagaccaaggaggcgtccatgatggag
tatgtcctatactccctggacctgtacaatgacagcgcccactacgcgctcaccaggttc
aacaaacagttcctgtacgacgagattgaggccgaggtgaatctgtgcttcgaccagttt
gtctacaagctggcagaccagatcttcgcctattacaaggtcatggctggaagtttgctg
ctcgataagcggctgcggtctgagtgcaaaaaccagggtgccaccatccacctcccaccg
tccaaccgctatgagacgctcctcaagcagaggcacgtgcagctcctgggcaggtccata
gacctcaatcgtctcatcacccagcgtgtctcagccgccatgtacaagtctctggagctg
gcgatcggacgatttgagagtgaggacctcacctcagtggtggagctggacggcctcttg
gaaatcaaccgcatgactcacaagctgctcagccgctatctgacgctggacagtttcgac
gccatgttccgcgaggccaaccacaacgtgtcggcgccctatgggaggatcacgctccat
gtcttctgggagctcaactacgactttctgcctaactactgctacaacggctccaccaac
cggtttgttcggacagtgttgccattatctcaagagtttcaaagagataaacagccgaac
gcacagcctcagtatttgcacggatcaaaggctctgaacctggcctattccagcatctac
agcagctaccggaacttcgtgggccccccccacttccaggtcatctgtaggctgcttggc
taccagggcattgctgtggtcatggaggagctgctgaaggttgtcaagagcctgctgcaa
ggcaccatcctgcagtacgtgaagacgctgatggaggtgatgcccaagatctgccgcctg
cctcggcacgagtacggctcccccggcatcctggaattcttccaccaccagctgaaggac
atcgtggagtacgccgagctgaagactgtgtgtttccagaacctgcgggaggtgggcaat
gctgtgctcttctgcctgctggtggagcagagcctgtctctggaggaggtgtgtgacctg
ctccatgccgcccctttccagaacatcttgcctcgggttcacgtgaaagagggagagagg
ctggatgccaagatgaaaagactggaatccaagtatgccccgctgcacctcgtccccctg
atcgagagactggggacccctcagcaaatcgctattgcgcgtgaaggggacctgctgacc
aaggaacggctgtgctgtggtctgtccatgttcgaggtcattctcacccgcatccgcacc
ttcctggatgatcccatctggcgcgggccgctgcccagcaatggcgtcatgcacgtggac
gagtgtgtggagttccaccggctctggagcgccatgcagttcgtctactgcatccccgtg
ggcacacacgagttcaccgtcgagcagtgctttggggacggcctgcactgggcaggctgc
atggtcatcgtgctcctggggcagcagcgacgctttgctgtgctggatttctgctaccat
ctgctcaaagtccagaaacacgatggcaaagatgagatcatcaaaaatgtgcctttgaag
aagatggtggagagaattcgcaagttccagattctgaatgacgagatcatcaccatcttg
gacaagtacctgaagtcaggcgacggagagagcaccccggtggagcacgtgcgctgcttc
cagccgcccatccaccaatccctggccagtagctga
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