Sorex fumeus (smoky shrew): 130032949
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Entry
130032949 CDS
T10594
Symbol
CDX1
Name
(RefSeq) homeobox protein CDX-1
KO
K09312
homeobox protein CDX1/4
Organism
sfum Sorex fumeus (smoky shrew)
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfum03000
]
130032949 (CDX1)
Transcription factors [BR:
sfum03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
130032949 (CDX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Caudal_act
Homeodomain
Homeobox_KN
YdaS_toxin
HTH_NDX
DUF7645
Motif
Other DBs
NCBI-GeneID:
130032949
NCBI-ProteinID:
XP_055980603
LinkDB
All DBs
Position
Unknown
AA seq
259 aa
AA seq
DB search
MYVGYVLDKDSPVYPGPARPAGLGLSPQAYNPAPPQYPDFTGYSHVEPGPAPPAAWSAPF
AAPKDDWAAAYGPGPAAPAASPAPLAFGPPPDFSPVPAPPGPGPGLLVQPLGGPGAPSSP
GAQRRAPYEWMRRSVAAGGGGGSGKTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKS
ELAANLGLTERQVKIWFQNRRAKERKVNKKQQQPPPPAQPPAPAPEVPAPGPPLGGLCPS
SAILLGASSPLPVKEEFLP
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgtacgtgggctatgtgctggacaaggactctcccgtgtaccccggccccgccaggccc
gcggggctcggcctgagcccgcaagcctacaaccccgcgcccccgcagtaccccgacttc
accggctactcgcacgtggagccgggccccgcgccccccgccgcctggagcgcgcccttc
gcggctcccaaggacgactgggccgccgcctacggcccggggcccgcggcccccgccgcc
agccctgccccactggcattcgggccgcctccggactttagcccggtgcccgcgcccccg
ggacccggcccgggcctcctggtgcagcccctcgggggtccgggcgcaccgtcctcgccg
ggagcgcagaggcgggcgccctacgagtggatgcggcgcagcgtggctgctggaggcggc
ggtggcagcggtaagacccggaccaaggacaaataccgtgtggtctacaccgaccaccag
cgcctggagctggagaaggaattccactacagccggtacatcaccatccggcgcaagtcg
gagctggctgccaacctggggctcaccgaacggcaggtgaagatctggttccaaaaccgc
cgggcgaaggagcgcaaggtgaataagaagcagcagcagcctccgcctccggcccagccc
ccagccccggcccctgaggttccagcaccggggcctcccctcgggggcctgtgccccagc
tctgccatcctcctgggggcctcctccccgctgcctgtcaaggaagagtttctgccctag
DBGET
integrated database retrieval system
