Sorex fumeus (smoky shrew): 130033085
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Entry
130033085 CDS
T10594
Symbol
GEN1
Name
(RefSeq) flap endonuclease GEN homolog 1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
sfum Sorex fumeus (smoky shrew)
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfum03400
]
130033085 (GEN1)
DNA repair and recombination proteins [BR:
sfum03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
130033085 (GEN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XPG_I
Chromo_2
XPG_N
Chromo_SEND1
Motif
Other DBs
NCBI-GeneID:
130033085
NCBI-ProteinID:
XP_055980759
LinkDB
All DBs
Position
Unknown
AA seq
907 aa
AA seq
DB search
MGVTDLWQILEPVKQHTHLHSLGGKTIAVDLSLWICEALSVKKMMGTVVKPHLRNLFFRI
SYLTLMDVNLVFVMEGEPPKLKADVMSKRNQVRYGSSGKPGTQKTGRSHFKSVLRECCDM
LECLGIPWVQAHGEAEAMCAFLNASGHVDGCITNDGDAFLYGAHTVYRNFTMNIKDPHVD
CYTISSIQSKLGLDRDALVGLAILLGCDYLPKGVPGVGKEQALKLTRILKGQSLLQRFDR
WNEKSCYSDPQPPVIKKLAHCSVCSHPGSPKDHERNGCKLCKSDRYCEPHDYDYCCPCEW
HQTEHDRQLQAVETAIKKKACSCEGFPFHEVIQEFLLNKDKLVKEIKYTRPDLLLFQRFA
LEKMDWPNSYACEKLLVLLTHYDMIERKLGRRNSNQLQPIRIIKTRIRNGVRCFEVEWEK
PEYYAMEDKPEEFDLQTIEEESLFNAAYPEIVAVYQKQKLEIKGKKQNSKKIKPKKISLL
DSDEMNFQSHMTSKLTSEIISKQNCKFNWEIPPDSPSVLESIPASLNNLILPEDTPCLDT
QEQLKSSQRPLAMEQIKAVSESLISESNQSNACFQNTSVIAELHLSTIDWEGTSFSNSPA
LPRDTLSPGLKSELRTASSDIFKNIPEKFSCNSECYSTKNNEMLNWKLQNTNSEEHLLSG
IADLHLQDLPLKERIYKKLSHPQDYVQVNVDLKTLSSFNVKECCFASSHSDCPSYMSKAP
LGTDLQNESRNSKILEGDHLFQEHSNMSTYIPYSVSNLIEKTSSVGLESPHATLDHGGKV
AVQSVQEIITKKSVCLERHSSDEESAPTFGKVKHITQKTKQSSEKNNLRQLQKRDANNLN
NCEIRIKETEHCVQAYKTTGNEQNCFPEAAKDSLGSLHCDKGKNDSGNCLDSPLPLYERL
KLRFKNT
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgggagtgactgatttgtggcaaattctggagcctgttaagcaacacacccacttacat
agccttggtggaaaaaccattgcagttgatctgagtctctggatatgcgaagcactgtca
gtcaaaaaaatgatgggaacagtcgtgaaaccacacctcaggaatttattttttcgtatc
tcatatttaacacttatggatgtgaatctggtgtttgttatggaaggggagccccccaaa
ttaaaggctgatgttatgagcaagaggaatcaggttcgttacggatcttcaggaaagcca
gggactcagaaaacagggagatcacacttcaaatcagtcttaagagagtgttgtgacatg
ctggaatgcttggggattccctgggtgcaggcacatggagaggcagaagccatgtgtgct
ttcctcaatgccagtgggcatgtcgatggctgcatcaccaatgatggagatgctttcctc
tacggggcccacactgtttacaggaacttcactatgaatatcaaggacccacatgttgat
tgttacacaatatcatccatccagagtaaacttggcttggatagagatgctctagttgga
cttgccatactacttggctgtgattatcttccaaagggagtccctggagttggaaaagaa
caagcattaaaacttaccaggattttgaaagggcagagtttacttcagaggtttgatcgg
tggaatgaaaaatcatgttactctgatccacaaccaccagtcattaaaaaattggctcat
tgctctgtgtgttctcatccaggttcccctaaggatcatgaacgtaatggatgcaaatta
tgcaagagtgaccgatattgcgagccgcatgattatgattactgctgtccctgtgagtgg
caccaaacagagcacgacaggcagctccaggcagtagagactgctattaagaaaaaagca
tgcagttgtgagggtttcccattccacgaggttattcaagaattccttctgaacaaggat
aagttggtaaaggaaattaagtacacaagacctgatttattattgtttcagagatttgca
ttggaaaaaatggactggcccaattcctatgcatgtgaaaaattgttagtacttttgact
cactatgacatgattgaaagaaaacttggtagaaggaactcaaatcaactacagcctatt
cgaatcattaaaaccagaattagaaatggagttcgttgctttgaagtagaatgggaaaag
cctgaatattatgctatggaagataaacctgaagaatttgatctacaaacaatagaagaa
gaatcattgtttaacgcagcttatccagagattgttgctgtttatcaaaaacagaaatta
gaaatcaaagggaagaaacaaaacagcaagaaaattaaacctaagaaaatcagtttgcta
gactcagatgagatgaattttcagtcacacatgacttcaaaactcacaagtgaaattatt
tctaaacagaattgtaagttcaattgggaaattccccctgattctccatcagtcctggaa
tcaatacctgcatcattgaataatttaattttacctgaagatactccctgtttggataca
caagaacagttaaagtcctctcagagacctttggctatggagcaaattaaagctgttagt
gaatctctaatttcagaatctaatcaatctaatgcctgcttccaaaatacatcagtgatt
gctgagttacatttgagcaccattgactgggaaggcacttctttcagtaattctccagct
cttccaagggacactttatctccaggtttaaaatcagaacttagaactgccagttctgat
atctttaaaaatatcccagagaaattttcatgtaactcagaatgctacagcaccaagaat
aatgagatgctgaattggaagcttcaaaacacaaattccgaagaacatcttctttctggc
atcgctgatttacatcttcaggatttgcctttaaaagaacgaatatataaaaagttatca
catcctcaggattatgtgcaagtgaatgttgatctgaaaactttgtcctcatttaatgtg
aaagaatgttgttttgctagtagccattctgattgtccatcatatatgtcaaaggctcct
ctaggaactgacttacagaatgaatctagaaattctaagatcctcgaaggagaccacctg
tttcaagaacactctaatatgagtacttatataccttactcagtcagtaaccttatagaa
aagacctccagtgttggacttgaatccccacatgctacattagatcacggtgggaaagtt
gctgtgcaaagtgttcaggaaattatcacaaagaagagtgtttgccttgagagacattct
tctgatgaagaaagtgccccaacgtttgggaaagtgaagcacataactcaaaaaacaaag
cagagctctgagaagaataacctacgtcagctccagaaaagggatgccaataacttgaat
aactgtgagatacgtattaaagaaactgaacattgtgtccaggcatataaaaccactggg
aatgagcaaaactgttttccagaggcagcgaaagattctctgggttccctccactgtgat
aagggaaaaaatgactctggaaattgtttggatagtcctcttcctttatatgagcgatta
aagctaagattcaaaaacacttga
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