Sorex fumeus (smoky shrew): 130033121
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Entry
130033121 CDS
T10594
Name
(RefSeq) protocadherin beta-7-like
KO
K16494
protocadherin beta
Organism
sfum Sorex fumeus (smoky shrew)
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sfum04515
]
130033121
Cell adhesion molecules [BR:
sfum04515
]
Cadherins
Protocadherins
130033121
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
130033121
NCBI-ProteinID:
XP_055980813
LinkDB
All DBs
Position
Unknown
AA seq
795 aa
AA seq
DB search
MEARVEHAVQKRQVLFLCVFLGMSWASTEPLRYFVAEETERGTVLANLAKDLRLGAEELS
ARGSRIFSDQKILFLLFNPLTGDLLLNDKLDREELCGPTEPCVLPFQLLLQKPFQIFSAE
LWVRDINDNSPVFLEKDISLEILESTTPGSTFLLQSAQDSDIGSNNLKNYTISSNAYFHI
NVHDGGEGTIYPELVLDQALDREKVPEFSLTLTAIDGGSPPRSGTTQICIQVVDVNDNAP
EFEHSLYKVQVPENSPIGSVVATVSARDLDTGSYGEVVYAFFYATERILKTFQINPTSGN
LYLKDELDYEAVQTYTLTIQAKDGGGLSGKCTVVVDVTDKNDNTPELLMSSLTSPIAENS
PETIVAVFRIRDRDSGNNAKMVCSIQDDLPFVLKQSVKNYFTLETERSLDRESQAEYNIT
ITVTDMGTPRLQTQHTITVLVSDVNDNAPAFSQPSYTLLVGENNSPALHIGSVSATDPDA
GSNAQVTYSLLPSQDPQLPLASLVSINADNGQLFALRSLDFEAVRTFEFGVGAWDRGSPA
LSSQARVRVLVLDRNDNAPFVLYPLQNASAPCSELVPRAAEAGYLVTKVVAVDSDSGQNA
WLSFQLLRATEPGLFSVWAHNGEVRTARPLSERDAPKHRLLVLVRDNGDPPLSASVTLHV
LLVDGFSQPFLPLPDAPPDAPPDDRLTVYLVVALACVSSLFLFSVLAFVAVRLCRRAGPP
AGAPYPLPDAYLPGHLLDVSGAGTLSHSYQYEVCLAGGAGTNEFKFLKPIVPNLQSQNTG
REVKEYPSIGNDMGF
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atggaggctagagtggagcatgctgtgcagaaaaggcaagtgctatttctttgtgttttt
ctgggaatgtcttgggcgagtacagaaccgcttcggtatttcgtggcagaggaaactgag
agaggcaccgttctggccaatttggctaaagacctgaggttaggggctgaggaactgtca
gcccgtggatctagaatcttttcagatcagaaaatactgtttttactattcaatccgctt
actggtgatttgcttctaaatgataaattagatcgagaggagctctgtggccccacggag
ccctgtgttctgcctttccagctcctactacaaaaaccatttcagattttcagtgctgaa
ctatgggttagagacatcaatgataattctccagtttttctagaaaaagacatttccttg
gagatattagaaagtaccaccccaggatcaacctttctcctacaaagtgcacaggattca
gatattggaagcaacaacctgaaaaactacacaatcagttcgaatgcctatttccatata
aatgttcatgatggtggagagggaactatctatcctgaactggtactggatcaagccctg
gaccgggaaaaagttcctgagttcagtttgaccctcacagccatagatggtggttctcca
cccagatctgggactacccagatatgcatacaggttgtggatgtaaatgacaatgctcct
gaatttgaacactcactttacaaggtgcaggtacctgagaatagccccattggctccgtg
gttgccactgtatcagctagagatttagatactggaagttatggagaagtagtctatgca
tttttttatgccactgaaagaattctcaaaacattccaaatcaatccaacatcaggaaac
ctttatcttaaagatgaattggactatgaggcagtgcaaacttacactttaactattcag
gccaaagatggtgggggactttctggaaaatgtactgtagtggttgacgtaacagataaa
aatgataacacaccagaactactaatgtcttcactgactagtccaattgcagaaaactcc
cctgagaccattgtagccgtctttaggattagagacagagattcaggaaacaatgcaaag
atggtatgctccattcaagatgaccttcccttcgttctgaagcaatctgtgaagaattac
ttcacactggaaacggagagatcactggaccgagagagccaggcagagtacaacatcacc
atcacggtgacagacatgggcacccccaggctgcaaacacaacacaccatcacagtgctg
gtgtccgacgtgaacgacaacgcccccgccttcagtcagccctcctacaccctgctggtg
ggtgagaacaacagccccgcactgcacataggcagcgtgagcgccactgaccccgacgca
ggcagcaacgcccaggtgacctactcgctgctgccttcccaagacccacagctgccgctc
gcctcgctggtgtccatcaacgccgacaacgggcagctgttcgcgctgcgctcgctggac
ttcgaggccgtgcgcaccttcgagttcggcgtgggcgcgtgggaccgcggctcgcccgcg
ctcagcagccaggcgcgggtgcgcgtgctggtgctggaccgcaatgacaacgcgcccttc
gtgctgtacccgctgcagaacgcgtcggcgccctgcagcgagctggtgcccagggcggca
gaggcgggctacctggtgaccaaggtggtggcggtggacagcgactcgggccagaacgcc
tggctgtctttccagctgctcagggccacggagcccgggctcttcagcgtgtgggcgcac
aatggcgaggtgcgcactgcgcggccgctcagcgagcgcgacgcgcccaagcacaggctg
ctggtgctggtcagggacaatggcgacccgccactgtcggccagcgtcacgctgcacgtg
ctgctggtggacggcttctcgcagcccttcctgccgctgcccgacgcgccgcccgacgcg
cctcccgatgaccgcctcaccgtctacctggtggtggccttggcctgcgtgtcgtcgctc
ttcctcttctccgtgctggccttcgtggccgtgcgcctgtgcaggcgggctggcccgccc
gcgggggccccctacccgctgcctgacgcgtacttaccgggacacctgctggacgtcagt
ggtgctgggaccctgtcgcacagctaccagtatgaggtgtgtctggcagggggcgctggc
acgaatgagttcaagttcctcaagcccattgtccctaatctgcagtcccagaacacagga
agggaagtgaaagaatacccttcaattgggaatgatatgggtttctga
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