Sorex fumeus (smoky shrew): 130033124
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Entry
130033124 CDS
T10594
Name
(RefSeq) protocadherin beta-6-like
KO
K16494
protocadherin beta
Organism
sfum Sorex fumeus (smoky shrew)
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sfum04515
]
130033124
Cell adhesion molecules [BR:
sfum04515
]
Cadherins
Protocadherins
130033124
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
130033124
NCBI-ProteinID:
XP_055980816
LinkDB
All DBs
Position
Unknown
AA seq
658 aa
AA seq
DB search
MVLKISEIATPGKVFPLKMAQDLDTGSNSLQSYRISSNPHFHVFTQNRSDGRKLPELVLD
KALDREEQSELKLILTALDGGSPPKSGTTEIQILVLDYNDNVPEFAQELYEAQIPENTRA
GSLVIKVSAKDLDAGHFGEISYALFQADGVNQPFEINPVTGEIRLMRILDFEEFQSYHMD
VEATDGGGLSGKSSVIIKVLDVNDNAPQLTISSLISPIPENVPETMVAVFSVSDADTGQN
QQVICSIDDNLPFLLRPSVENFYTLVTEGSLDRESQAEYNITITVTDMGTPRLQTQHTIT
VLVSDMNDNAPAFSQPSYTLLVGENNSPALHIGSVSANDPDAGSNAQVTYSLLPSQDPQL
PLASLVSINADNGQLFALRSLDFEAVRAFEFGVGAWDRGSPALSSQARVRVLVLDRNDNA
PFVLYPLQNASASCSELVPRAAEAGYLVTKVVAVDGDSGQNAWLSFQLLKATEPGLFSVW
AHNGEVRTARPLSERDAPKHRLLVLVRDNGEPPLSASVTLHVLLVDGFSQPFLPLPDAPP
DAPPDDRLTVYLVVALACVSSLFLFSVLAFVTVRLCRRAGPPAGGPYPLPDAHFPGHLLD
VSGAGTLSHSYQYEVCLAGGAGMNEFKFLKPILPTFPPQDTGEAVEENPSFRNSFPFS
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggtactgaaaatatcagaaattgccacacctggaaaagtatttcccttgaaaatggca
caggatttagacactggtagcaacagcctccagagctacagaatcagctccaatcctcac
ttccatgtttttacccaaaatcgcagtgatggtagaaaactcccagaactggtgctggat
aaggcattggaccgagaggaacagtctgagctcaagctaatactaacagctctggatggt
gggtctccacccaagtcagggaccacagagattcagattctggtactggactacaacgat
aatgtcccagagtttgcccaggagctttatgaggctcagatccctgaaaacacccgcgct
gggtctctggtaatcaaagtctctgcgaaagatttagatgcaggacattttggggagatc
tcatatgctctatttcaagctgatggtgttaatcaaccctttgaaataaacccagttaca
ggagaaattcgactgatgagaatattggattttgaggaatttcaatcttatcacatggat
gttgaggccacagatggaggaggactatccggaaaaagctctgttatcatcaaggtattg
gacgtgaatgacaacgctccacaattaaccatctcgtccctcatcagccccatccctgaa
aacgtgccagagactatggtggcagttttcagtgtatctgatgcagatactggacaaaac
caacaagttatttgttctatagatgataatcttccctttcttctaagaccctcagtggaa
aatttctataccttggtcacagaaggatcgctggacagagagagccaggcagagtacaac
atcaccatcacggtgacagacatgggcacccccaggctgcaaacacagcacaccatcaca
gtgctggtgtccgacatgaacgacaacgcccccgccttcagccagccctcctacaccctg
ctggtgggcgagaacaacagccccgcactgcacataggcagcgtgagtgccaatgacccc
gacgcgggcagcaacgcccaggtgacctactcgctgctgccttcccaagacccacagctg
ccgctcgcctcgctggtgtccatcaacgccgacaatggacagctgttcgcactgcgctcg
ctggacttcgaggccgtacgcgccttcgagttcggcgtgggcgcgtgggaccgcggctcg
cccgcgctcagcagccaggcgcgggtgcgcgtgctggtgctggaccgcaatgacaacgcg
cccttcgtgctgtacccgctgcagaacgcgtcggcgtcctgcagcgagctggtgcccagg
gcggcagaggcgggctacctggtgaccaaggtggtggcggtggacggcgactcgggccag
aacgcttggctgtcgttccagctgctcaaggccacggagcccgggctcttcagcgtatgg
gcgcacaatggcgaggtgcgcactgcgcggccgctcagcgaacgcgacgcgcccaagcac
aggctgctggtgctggtcagggacaatggcgagccgccactgtcggccagcgtcacgctg
cacgtgctgctggtggacggcttctcgcagcccttcctgccgctgcccgacgcgccgccg
gacgcgcctcccgatgaccgcctcaccgtctacctggtggtggccttggcctgcgtgtcg
tcgctcttccttttctccgtgctggccttcgtgaccgtgcgcctgtgcaggcgggccggc
ccgcccgctgggggcccctacccgctgccggacgctcacttcccgggacacctgctggac
gtcagtggcgctggaaccctgtcgcacagctatcagtatgaggtgtgtctggcggggggc
gctggcatgaatgagttcaagttcctcaagcccattttgcccaccttcccgccccaggac
actggcgaagcagtagaggaaaacccctcctttaggaatagctttccattcagttaa
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