Sorex fumeus (smoky shrew): 130033141 Help Entry 130033141         CDS       T10594                                  Symbol DMXL1 Name (RefSeq) dmX-like protein 1 isoform X1   KO K24155   rabconnectin-3a Organism sfum  Sorex fumeus (smoky shrew) Pathway sfum04142   Lysosome Brite KEGG Orthology (KO) [BR:sfum00001]  09140 Cellular Processes   09141 Transport and catabolism    04142 Lysosome     130033141 (DMXL1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:sfum04131]     130033141 (DMXL1) Membrane trafficking [BR:sfum04131]  Exocytosis   Small GTPases and associated proteins    Rab associated proteins     130033141 (DMXL1)  Endosome - Lysosome transport   Acidification regulators    Rabconnectin-3 complex     130033141 (DMXL1)    RAVE complex     130033141 (DMXL1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Rav1p_C WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_IFT140_1st WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st Beta-prop_EML Beta-prop_DCAF4 Beta-prop_HPS5 MIOS_WD40 Beta-prop_Vps41 Beta-prop_WDR19_2nd Motif Other DBs NCBI-GeneID:  130033141 NCBI-ProteinID:  XP_055980834 LinkDB All DBs Position Unknown AA seq 3044 aa AA seqDB search MNLHQVLTGAVNPGDHCFSVGSVGDQRFTAYASGCDIVILGSDFERLQIIPGTKHGNIQV GCVDCSMLQGKIAASYGNVISVFEPVKVPKQKKNLEFYSQWQKSGQFFLDSKAHNITWDP SGNRLLTGSSCLQLWSKADSEKPTEDENPDKTDLNFGDWRCIWNCKTASQVHLMKFSPDG EFFATAGKDDCLLKVWYNVENWRTAVTSPDRSSEIQSQGEIDFSFVYLAHPRAVNGFSWR KTSKYMPRASVCNVLLTCCKDNVCRLWVETFLPNDSLLYGGDCNHWTEPVTFTNNFKRNA SSKERVQNALDINLRHFRRGRRRSHALVAHTGYLPHQQDPHLVHRNTPLHANALCHFHIA ASINPATDIPLLPSITSLSLNENEEKNGPFVVHWLNNKELQFTLSMEVFLQQLRKSFEQP SSEASVEDSNQADIKSDEEMDDGAEDLKINLEKKELGNDKMASNSSSVSLPSAAIDHQIE VLLSEWSKNADMLFSIHPMDGSLLVWHVDWLDEYQPGMFRQVQVSFVSRIPVAFPTGDAN SLCKSIVMYACTKNVDLAIQQGKQKPSVLTRSTSLLFSSGHNKSNNSLKLSIFTPNVMMI SKHADGSLNQWLVSFAEESAFSTVISISHKSRYCGHRFHLNDLACHSVLPLLLTTSHHNA LRTPDVDDQKQPDDAVNAEDCSLTQQKKSTIDVPFQDPNAVYSELILWRVDPVGPLSFSG GVSELARINSLHVSAFSNVAWLPTLIPSYCLGAYCNSPSACFVASDGQYLRLYEAVIDAK KLLYELSNPEISKYVGEVFNIVSQQSTARPGCIIALDSITRLQGRKTQLLHVFQEDFILN NLQKKSLRKDKISDAGSSCNGFSEKFYLIVIEYTQDNRSLLHMWNLHLKSVPVSLDEKVD VKIPEAVWQTEEHYYSSPEKILSPFSQKYQACKANLQSTSKLTLSSEMVYSQELQLPEGV EIISVKPSAGHLSSSSIYPMCSAPYLLATSCSDEKVRFWRCRVTDGESATSKNGEMELVY IWEEWPLLIEEGLHSNSSITIPGRPIEVSCAHTNRLAVAYKQPASNSSYSQDFVMHVSIF ECESTGGSCWILEQTIHLDELNTVLDSGISIDSNLVAYNKQEVYLSSKENITSNTKHLVH LDWMSREDGSHILTVGIGSKLFMYGPLSGKVQEQTGKESLIFPLWESTKVVPLSKFVLLR SVDLVSSVEGAPPFPVSLSWVRDGILVVGMDCEMHVYSQWQPSSKQEPIVTDSYNGSTPS LVSLVKHNNSSSSGLHPPKKTLTRSMTSLAQKICGKKTAFDPSVDMEDSGLFEAAHVLSP TLPQYHPLQLLELMDLGKVRRAKAILSHLVKCIAGEIVALNEAESNHERRLRSLTISASG STTRDPQAFNKSESTDYTEIDSVPPLPLYALLAADDDSYFSSLEKSSNQSTLNSSNQLSK ESYDDLFQNSSLTIDSYVLETDEEDTKPRVIDLSQCSPTYFGPEHAQVLSGHLLHSSLPG LSRMEQMSLMALADTIATTSTDIGESRDRSQGGETLDECGLKFLLAVRLHTFLTTSLPAY RAQLLHQGLSTSHFAWAFHSVAEEELLNVLPAMQKDDPTWPELRAMGVGWWVRSNRILRR CIEKVAKAAFYRKNDPLDAAIFYLAMRKKAVIWGLYRSQKDTKMTQFFGHNFEDERWRKA ALKNAFSLLGKQRFEHSAAFFLLAGCLRDAIEVCLEKLNDIQLALVIARLYESEFDTSAT YKSILHKKVLGIDSPVSELQSLNINVNYDPFLRSMAYWILEDYSNALETLIKQPVREDDD QVKISACNPAVFNFYNYLRTHPLLLRRHFGSSDTFSRHLSVTGKSGLAGTISLSERKLFF TTASAHLKAGCPMLALEVLSKMPKVIKKTKSFCRPSSFVDTSKNCSPSSLKLDAKEDKAS AFDWSQSLINGLGSSSEGSSEKQSNSTLSFDWSQPSVVFQDDSLELKWDTDSEEENEDLS ISRKELKSSQSKVGKIDETSSNCTSSLSTLDENDIINPSEDIIAVQLKFRACLKILTVEL RTLSTGYEIDGGKLRYQLYHWLEKEVIALQRTCDYCPDAEELKSTLGENGDKFGLSEETD DLPHQEKVKQQREIFQEKRQWLLKYQSLLRMFLSYCILHGSHGGGLASVRMELILLLQES QQETSEPIFPNPLSEQTSVPLLFACTASAKTVVANPLLHLSNLTHDILHAIINFDSPPHP DNQNNKVYVMHTLAASLSACIYQCLCGSHNYSSFQTNPFTGMVYQTVLLAHRHSLKTGSL DEAVTPNTSPSQWPGITSLMRLLNSSGEEAQSGLTTLLCEILTAVYLSLFIHGLATHSSN ELFRIVAHPLNEKMWSAMFGGGAHVPSKEQTHSKALHVSSLVEEGEKQNKRFRTSKMSCR DSTPQTSSLPSVNLESLTVKEKFIPPELSIWDYFIAKPFLPPSQSRVEYDSEESLESDEE EEDDISASDFHFQEHSNSNSYSWSLMRLAMVQLVLNNLKTFYPFAGHDLAELPVSSPLCH AVLKTLQCWEQVLLRRLEIHGGPPQNYIASHTSEESVSAGPAILRHKALLEPTNTPFKSK HHLALSVKRLWQFLVKQEEIQETFIRNIFTKKRCLNESLEDHCETIKNSMLEEPNIKKIE ADLGYPGGKARIIHKESDIITAFAVNKANRNCIAIASSHDVQELDVSGILATQIYTWVDD DTEMETKGSEDFLVIHARDDLTAVQGTTPYTHSNPGTPINMPWLGSTQTGRGASVMIKKP INNVRRMTSHPTLPYYLTGAQDGSVRMFEWGHSQQITCFRSGGNSRVTRMRFSYQGNKFG IVDADGYLSLYQTNWKCCPIAGSLPKPYLTWQCHNKTANDFVFVGSSSLIATAGLSTDNR NVCLWDTLVAPANSLVHAFTCHDSGATVLAYAPKHQLLISGGRKGFTCIFDLRQRQQRQL FQSHDSPVKAVAIDPTEEYFVTGSAEGSIKIWSFSTFSLLHTFINEHARQSIFRNIGTGV MQVETGPANHIFSCGADGTMKMRILPDQFSPLNEVLKNDVKFML NT seq 9135 nt NT seq  +upstreamnt  +downstreamnt atgaacctgcaccaggtgctgaccggggcggtgaaccccggcgaccactgcttctccgtg ggcagcgtcggcgaccagcgcttcacggcgtatgcatctggatgtgacattgtaatactg ggaagtgattttgaaagattacaaataatcccaggaactaagcatggaaatattcaagtg ggatgtgtagattgttcaatgctacaaggcaagattgcagcatcctatggaaatgttatc tctgtttttgaaccagttaaagtaccgaagcaaaagaaaaatttggaattttatagtcaa tggcagaaaagtggacaattctttttagattcgaaagcacacaatataacttgggatccg tcaggcaatcgtctattaactggttctagctgtttacaactctggtccaaagctgactct gagaagccaactgaagatgaaaatccagataaaactgatcttaactttggggactggaga tgcatttggaactgcaaaactgcttctcaagttcacttaatgaaattttcaccggatgga gaattttttgccactgctgggaaggatgactgtcttttaaaggtatggtataacgtagaa aactggcggacagctgttacctctccagatagaagttcggaaatacagtctcaaggagaa attgacttttctttcgtgtatttggcccatcctcgagctgtaaatgggttttcctggcgt aaaacaagcaaatacatgccaagggcatctgtatgtaatgtattgttgacttgctgcaaa gataatgtatgtcgtctttgggtagagacatttttaccaaatgattctctactatatgga ggtgactgcaatcattggactgaaccagtgacttttacaaataacttcaagagaaatgct tctagtaaagaacgagttcaaaatgctttggatataaatctgagacattttcgtagaggt cggaggaggtcacatgcactagtagcacatactgggtatcttccacatcagcaggatcct catcttgtccacaggaacaccccactgcatgccaatgctctttgccactttcatattgct gccagcattaacccggccacagacattccacttctgccttctataacatctctaagtctc aatgaaaatgaagagaagaatggaccttttgtggtacactggctaaacaataaagagttg cagtttactttgtccatggaagtctttttgcagcaactcagaaaaagttttgagcagccg tcttctgaggccagtgtagaagactctaatcaggcagatataaagtctgatgaagaaatg gatgatggtgctgaagatctgaaaataaatcttgaaaagaaggaattgggcaatgataaa atggcatcaaactcaagctctgtatcactaccatcagctgccattgatcatcagattgaa gtacttctgtctgagtggagtaagaatgcagacatgctattcagtattcatcccatggat ggttctttgctggtttggcatgtggattggctggatgaatatcagcctgggatgtttcgc caagtacaggtgtccttcgtttccagaattcctgtagctttccctactggtgacgcaaac tctctctgtaaaagcatagtgatgtatgcctgtactaaaaatgttgatttggctattcag caaggaaaacaaaaaccttcagtcctcacacgttccacatcattgcttttctcttctggt cataataaatcaaataatagtctaaaattaagtatttttacccctaatgttatgatgatt tcaaaacatgcagatggctctctgaatcagtggctggtcagttttgccgaggaatctgct ttttctacagttatcagtatttcccacaaatccagatactgtggtcatcgttttcatctt aatgatttagcttgccattcagtattaccattattacttactacatcacaccacaatgca ctaaggacaccagatgttgatgaccaaaagcaaccagatgatgccgtcaatgctgaagac tgttctttgacccaacagaagaagagcaccattgatgtgccatttcaggatcccaatgca gtttatagtgaacttattctttggagggttgatcctgttgggccactgtctttttctgga ggtgtttccgagcttgcccggattaattctcttcatgtttctgcattttctaatgtggca tggctgcccacacttatacccagttattgtctaggtgcatactgcaactctcctagtgca tgctttgtagcaagtgatggacaatatctgagattgtatgaagcggttattgatgccaag aaacttttgtatgaactttccaatcctgaaatttctaaatacgttggtgaagtatttaac atcgtaagtcagcagtcaacagcgaggccaggatgcattattgcattggattccattacc agacttcaaggcagaaaaacccagttgcttcatgtttttcaagaagacttcattttgaat aatctccagaagaaaagtctgagaaaagataaaatatctgatgcaggcagctcttgtaat ggattttctgaaaaattctacctaattgtgatagaatatactcaagacaaccgttcgttg ttgcatatgtggaatttgcatttaaagtcagttcctgtctcattggatgaaaaagtagat gtaaaaatacctgaggcagtttggcagacagaagaacattactattcttctccagagaag attctgtcccccttttcacagaaatatcaggcttgtaaagcaaatctacagagtaccagc aagttgactctgtcttcagaaatggtttatagccaagagttgcaattgccagaaggagtt gagataataagtgttaagccttcagcaggacatttgagttcttcgtccatatatcccatg tgcagtgctccttatttattggcaacttcgtgctcagatgagaaagtaagattctggaga tgcagagtaacagatggagaatcagctacatcaaagaatggagaaatggagcttgtatat atttgggaagaatggccattacttattgaagagggacttcacagcaatagtagtataacc atacctggtaggcctatagaagttagctgtgcacacacaaaccgtttagcggttgcatac aagcagcctgcatctaatagcagctattctcaggactttgtgatgcatgtaagtatattt gagtgtgagtcgacaggaggttcatgttggatccttgaacagacaattcatttagatgag ttaaatacagtgttggattctggcattagtattgatagcaatttagttgcctataataaa caagaggtatatctatccagtaaagagaatatcacttctaacacaaagcacttagttcat ttagactggatgtctagagaagatggttctcatattttgactgtaggaattggatcaaaa ctttttatgtatggacccctgtctggcaaagtacaagagcagactggtaaagaaagcctc atttttcctctctgggagagtactaaagttgtgcctctttctaagttcgtgcttttacga agtgtggacttggtttcttctgtagaaggtgccccaccttttcctgtttctttatcctgg gtccgggatggcatcctcgttgtaggaatggattgtgaaatgcatgtatattcccagtgg cagccgtcttctaaacaagaacctattgtaacagactcctataatgggagtactccatct ttagtaagtttagtaaaacacaataactcgtcaagttctggattacatcctccaaagaaa actctaactcgatctatgaccagtcttgcacagaaaatatgtgggaaaaaaactgcattt gatccttctgtggatatggaagattcaggtctttttgaagcagctcatgtactgtctcca actttacctcagtaccatcccttgcagctcttggaacttatggaccttggcaaagtccgg agagcaaaggccatcttgtcacatcttgttaagtgcattgctggagaaattgtggctctt aatgaagctgaatctaatcatgagcgtcgtctaaggtctctcaccatcagtgctagtggt agcactaccagagacccacaggcattcaacaagagtgaaagtactgattacacagaaata gattctgtcccgccacttcctttatatgccttacttgcagcagatgatgatagctatttc tcatcactggagaagtctagcaatcagagtaccttaaatagctcaaatcaattgtcaaaa gaaagttatgatgatcttttccagaactcttctttaactattgatagttatgtgttagag acagatgaagaagatacgaaacccagagttattgatctttcacagtgcagtccaacttac tttggtcctgaacatgctcaggttctttctggacacctacttcattctagtttaccagga ctcagccgaatggaacagatgtctttgatggccttagcagatacaattgcaactaccagc actgatattggagaaagccgagacagaagccaaggtggagaaacacttgatgaatgtgga ttaaaatttcttttggctgttagacttcatacgtttcttaccacatcccttccagcttat cgagctcaactccttcaccaaggcctgtctactagtcattttgcctgggcatttcattca gttgcagaagaagaactgctgaacgtgttgccagcaatgcagaaagacgatcctacttgg cctgaactaagagcaatgggtgtggggtggtgggttcggagtaatcgtatcttacgcaga tgtatagaaaaagtagccaaagccgccttttacagaaagaatgatcctttagatgcagcc atattttaccttgcaatgagaaagaaagctgtcatttggggattatatagatcccaaaaa gacaccaagatgacacagttctttgggcataattttgaggatgagcgatggcgtaaagca gcattaaagaatgctttttctttgttagggaaacaaagatttgaacattctgcagccttt tttcttttagctggttgcctcagagatgcaattgaggtatgtcttgagaaactgaacgat atccagttggctcttgtaatagcacgactctatgagtctgaatttgatacatctgcaaca tataaatctattttacataaaaaagttttgggaattgattctcctgtcagtgaactccag tcattgaacataaatgtgaattatgatccttttcttcggagtatggcatattggatttta gaagattatagtaatgctctggaaacactaataaagcaacctgtcagagaggatgatgat caagtcaagatttcagcctgtaaccctgcagtttttaatttctacaactatctaagaaca catcctcttttgctgagacgtcattttggatcatcagatacattttccagacacctgagt gtaacaggaaaaagtggactggctgggacaatcagtttaagtgaaagaaaattatttttt actactgccagtgctcatttaaaagctggctgccccatgttggccttggaagtattatca aagatgccaaaggttatcaagaaaacaaaatctttttgtagaccatccagttttgtggat actagtaaaaattgttcaccttcttcactaaaattggatgcaaaggaagataaagcttct gcttttgactggtcacagtcgctcattaatggtttggggtcttcttcagagggctcttca gagaagcaatcaaattccactctttcttttgattggagtcaaccaagtgttgtatttcag gatgattctttggaattaaaatgggacactgatagtgaggaagagaatgaggatctctct atttcaaggaaagaattgaaatcttcacagagcaaagtaggtaaaatagatgaaacaagt tctaattgcaccagctctctcagcacactagatgaaaatgacattataaatccatcagaa gatataattgccgttcaattgaagttcagagcatgtttaaaaattctcacagtagaactt cgtactttatctactggctatgaaattgatggtgggaaattgcgttatcagctataccat tggcttgaaaaagaggtgatagctcttcaaaggacttgtgactattgtcctgatgctgaa gaattaaagtctacacttggagaaaatggagataaatttggattaagtgaagagactgat gatttgcctcaccaagagaaagtgaaacagcagagagagatttttcaagaaaaacggcag tggcttttgaaatatcagtcactcttacgaatgtttcttagttactgcatacttcatgga tcccatggtgggggacttgcatctgtgagaatggaattaattttacttttgcaagaatct caacaggaaacgtcagaaccaatatttcctaaccctctgtcagaacagacctctgtccct ctcctttttgcttgcacagctagtgccaaaacagtagttgccaatccattgttgcacctt agtaatctaactcatgatattctacatgccataataaactttgattcgccaccccatcct gataaccagaacaacaaagtttatgtaatgcatactttagcagcctcactttctgcttgc atttatcagtgcctttgtggtagtcataattacagttcatttcagacaaatccatttact ggaatggtatatcaaactgttcttcttgcccatcgacactctttgaaaaccgggagctta gatgaagcagtaactcccaatacatcaccatctcagtggccaggaattacttctctaatg cgacttttgaattcttctggtgaggaagcccagtcaggactaacaaccctgctctgtgag attctgacagcggtgtatcttagtctcttcatccatggcttggctacacattctagtaac gaactttttcggattgtggcccatcctctaaatgaaaaaatgtggtctgctatgtttggt ggaggtgcacatgttcccagcaaagaacagacacactcaaaagctttacatgtttcttcg ctagtggaagaaggagaaaaacagaacaaacgtttcaggacatcaaaaatgtcttgcaga gattctaccccacagacttcttccttaccatctgtaaacctggagtcactgacagtaaaa gagaaattcatcccacctgagttgagtatctgggactatttcatagccaagccttttcta cccccttcccaaagtagagtggaatatgattcagaggagagtctggaaagtgatgaagag gaagaagatgatatttcagcttcagattttcatttccaagagcattctaattcaaattca tatagttggtcattgatgcgcttggcaatggtacagttggtgctcaataatttgaagact ttctatccctttgcaggtcatgaccttgcagagctcccagtcagctcaccactttgtcat gcagttctaaaaactcttcagtgttgggaacaggttcttcttaggcgacttgaaatccat ggtgggccacctcaaaactatattgcgagtcatacctctgaagaaagtgtatctgcaggt ccagcaattcttcgtcacaaagctttactagaacctacaaacactcctttcaaatccaaa catcacctagcactgtctgtgaagagactttggcagtttttggtgaagcaggaagaaatt caggaaacatttatcagaaatatattcacaaagaaaagatgtttaaatgagtctttagag gaccactgtgaaaccatcaaaaattctatgttggaggagccaaacatcaaaaagatagaa gcagatttgggataccctggaggtaaagcaagaattatacataaggaatctgatatcatt acagcttttgctgttaataaagcaaatagaaactgcatagcaattgcatcaagccatgat gttcaagaactggatgtttctggaattctggctacacagatctatacatgggtagatgat gatacagaaatggaaaccaaaggatcagaagatttcttggttatccatgctcgagatgat ttaacagctgtgcaaggtaccaccccctatacacatagcaatccgggcactccaatcaac atgccgtggcttggtagtacacagactggcagaggagcatctgtgatgattaagaaaccc attaataatgttcgaagaatgacttctcatccaacacttccttactatctgacaggagct caagatggaagtgtcagaatgtttgaatggggccattctcaacaaataacctgttttcga tctggtggcaattcaagagttacaagaatgagatttagctatcagggaaataagttcgga atagttgatgctgatggatatttaagtttatatcaaacgaactggaaatgttgtcctatt gctggaagtttgccaaaaccatacctgacctggcagtgtcataacaaaacagccaatgac tttgtcttcgttggttcttcctctttgatagctactgctggtctttcaactgataataga aatgtatgtttgtgggatactctggtagcacctgccaatagtttagtccatgcttttact tgccatgatagtggagccactgttctagcatatgctccaaagcatcagctactaatatct ggtggccgaaaaggctttacgtgtatatttgacctgcggcaacgacaacaaaggcagctt ttccagagccatgattctcctgttaaagcagttgctattgatccaacagaagagtacttt gttacaggatccgcagaaggcagcataaagatttggagcttctccacctttagtcttctc cacacttttatcaatgaacatgctcgacagtccattttcaggaatattggaactggagta atgcaagtggagacaggaccagcaaatcacattttttcatgtggagctgatggaacaatg aaaatgagaatactaccagatcaatttagcccattaaatgaagtcttgaaaaatgatgta aaatttatgctgtaa

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