Sorex fumeus (smoky shrew): 130033405
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Entry
130033405 CDS
T10594
Symbol
ASCC3
Name
(RefSeq) activating signal cointegrator 1 complex subunit 3
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
sfum Sorex fumeus (smoky shrew)
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfum03400
]
130033405 (ASCC3)
Enzymes [BR:
sfum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
130033405 (ASCC3)
DNA repair and recombination proteins [BR:
sfum03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
130033405 (ASCC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
ASCC3_N
WHD_SNRNP200
ResIII
Helicase_C
Pua-like
Helicase_PWI
T2SSE
AAA_19
TPR_IFT122
FimL_C
Motif
Other DBs
NCBI-GeneID:
130033405
NCBI-ProteinID:
XP_055981079
LinkDB
All DBs
Position
Unknown
AA seq
2204 aa
AA seq
DB search
MALPRLTGALRSFSNVTKQDNYNEEESDLKLKRSKLHEQTGGLDLAWEKIIAFLNEKLEK
SEMQSVNEDLKDILQAAKQIVGMDNGKEAIESAAAFLFKTFHLKDTVGHKETKAIKQMFG
PFPSSSATAACDATNRIASHFHQDSLTALVQGSKEDHGDDRVLFGKNLVFSFDMHDLEHF
DELPINGDSQKTISLDYKKFLNEHFQEHSTPELKPVEKSNDSLLWCEVEKYLNATLNEMA
ETTRIEDLCCTLYDMLASGKSGDELQNEFFELLGPDGLELIEKLLQNRITIVDRFLNSSN
DHKLQALQDNCKKILGENAKPNYGCQVTIQSEQEKQLMKQYRREEKRNARREKKAGEDGE
ISEGLTCFDPKELRIQREQALLNARSAPILSRQRDLDVEKIRYPHVYDSQAEAMKTSAFI
AGAKMILPEGIQRENNKIYEEVKIPYSEPMPIGFEEKPVFIQDLDEIGQLAFKGMQRLNR
IQSIVFETAYNTNENMLICAPTGAGKTNIAMLTILHEIRQHFQQGVIKKNEFKIVYVAPM
KALAAEMTNYFSKRLEPLGIIVKELTGDMQLSKSEILRTQMLVTTPEKWDVVTRKSVGDV
ALSQIVKLLILDEVHLLHEDRGPVLESIVARTLRQVESTQSMIRILGLSATLPNYLDVAQ
FLHVNPFIGLFYFDGRFRPVPLGQTFLGVKSANKVQQLNNMDEVCYESVLKQVKAGHQVM
VFVHARNATVRTAMSLIERAKNNGQISCFLPAQGPEYGHAEKQVQRSRNKQVRELFLDGF
SIHHAGMLRQDRNLVEHLFSNGHVKVLVCTATLAWGVNLPAHAVIIKGTQIYDAKRGSFV
DLGILDVMQIFGRAGRPQFDVFGEGIIITTHDKLSHYLTLLTQQNPIESQFLESLADNLN
AEIALGTVTNVEEAVKWISYTYLYVRMRANPLVYGISHKAYQMDRTLAKHREQLVIEVGR
KLDKARMIRFEERTGYFSSTDLGRTASHYYIKYSTIETFNELFDAHKTESDIFAIVSKAE
EFDQIKVREEEIEELDTLLNNFCELSAPGGVENSYGKINILLQTYISRGEMDSFSLISDS
AYVAQNAARIVRALFEIALRKRWPAMTYKLLNLSKVIDKRLWGWASPLRQFSVLPPHILT
RLEEKNLSVDKLKDMRKDEIGHMLHHVNIGLKVKQCVHQIPSVTMEASIQPITRTVLRVT
LSISPDFSWSDQVHGTVGEPWWIWVEDPTNDHIYHSEYFLILKKQVISKEAQVLVFTIPI
FEPLPSQYYIRAVSDRWLGAEAVCIINFQHLILPERHPPHTELLDLQPLPVTALGCEAYE
ALYNFSHFNPVQTQIFHTLYHTDCNVLLGAPTGSGKTVAAELAIFRIFNKYPTSKAVYIA
PLKALVRERMDDWKVRIEEKLGKRVIELTGDVTPDMKSIAKADLIVTTPEKWDGVSRSWQ
NRNYVKQVTILIIDEIHLLGEERGPVLEVIVSRTNFISSHTEKPVRIVGLSTALANARDL
ADWLNINQMGLFNFRPSVRPVPLEVHIQGFPGQHYCPRMASMNKPTFQAIRSHSPAKPVL
IFVSSRRQTRLTALELIAFLATEEDPKQWLNMDEREMENIIGTLRDSNLKLTLAFGIGMH
HAGLHERDRKTVEELFVNCKVQVLIATSTLAWGVNFPAHLVIIKGTEYYDGKTRRYVDFP
ITDVLQMMGRAGRPQFDDQGKAVILVHDIKKDFYKKFLYEPFPVESSLLGVLADHLNAEI
AAGTITSKQDAMDYITWTYFFRRLIMNPSYYNLSDVSHDSVNKFLSNLVEKSLIELEHSY
CLEIGEDNRSIEPLTYGRIASYYYLKHQTVKMFKERLKPECGVEELLSILSDAEEYTDLP
VRHNEDHMNSELAKCLPLETNPHSFDSPHTKAYLLLQAHLSRTMLPCPDYDTDTKTVLDQ
ALRVCQAMLDVAADQGWLVTTLSITNLVQMVIQGRWLKDSSLLTIPNIEHHHLYIFRKWS
SNTKGSHAGGHSGPIECLPELIQACGGQDRVFSSMIGKELPEVKMKQAWSFVSHLPVIDV
SLSVKGWWDDSVEGHNELSITTLTSDKRNDNRWVKLHADQEYVLQVSLQRIHTGFHKGRP
DNHAATPRFPKLKDEGWFLILGEVDKRELIALKRVSYVRSQSVVSISFYTPEVPGRYIYT
LYFMSDCYLGLDQQYDIHLNVTPASISSRNSEEVSDSFHDLKVK
NT seq
6615 nt
NT seq
+upstream
nt +downstream
nt
atggctttacctcgactcacaggagccttgcgctccttttcaaatgtcaccaagcaagat
aattataatgaagaagagtctgacttaaagttgaagcgttctaaacttcatgaacaaact
ggaggtttagacctggcatgggaaaagataatagcatttttgaatgaaaaactggaaaaa
agtgaaatgcagagtgtaaatgaagacttgaaagatatattgcaggctgcaaaacaaata
gttggaatggataatgggaaagaagcaattgaaagcgcagctgcatttctcttcaagaca
tttcacttgaaggacactgttggtcacaaggagacaaaagctatcaagcagatgtttggt
cctttcccatcatcatctgccactgcagcatgtgatgcaactaacagaattgcttctcac
ttccatcaagatagtcttactgctcttgtccagggatcaaaagaggaccatggtgatgat
agagttttatttggtaaaaatttagtattttcatttgacatgcatgatttggagcacttt
gatgaactgccaataaatggtgactcccagaaaacaataagcctagattacaagaaattt
ctgaatgaacattttcaggagcattctaccccagagcttaagcctgtggaaaaatcaaat
gactctcttttgtggtgtgaagttgagaagtacttaaatgcaactttaaatgaaatggct
gaaacaacaagaatagaagatctatgctgtactttatatgatatgcttgcttctggtaaa
agtggtgatgaacttcagaatgagttttttgaactgctgggacctgatggacttgaactt
attgagaagcttctccagaacagaattacaattgtggatagatttctaaattcttcaaat
gatcataagttgcaagctcttcaagacaactgcaaaaaaattttaggagaaaatgctaaa
cctaattatggttgtcaagtcactattcagtctgaacaagaaaagcagttaatgaaacaa
tatcgccgcgaagaaaaaagaaatgccaggcgagaaaaaaaggctggtgaggatggagaa
atttcagaaggacttacatgctttgatccaaaggaattgcggatacaaagagagcaagct
cttctcaatgcaagaagtgctccaattcttagcaggcagagagacctggatgttgaaaaa
atacgttatccgcatgtctatgattctcaggctgaagctatgaaaacatcagcattcatt
gctggtgctaagatgattttaccagaaggaattcaaagggagaataacaagatatatgag
gaagtaaagattccctacagtgaaccaatgccaattggttttgaagaaaaaccagttttt
attcaagacttagatgagattgggcagttggcttttaaaggaatgcagaggctcaataga
atccagtcaattgtttttgaaactgcctacaacaccaatgagaacatgctgatttgtgct
cctactggagcaggaaagaccaatattgcaatgcttaccattctgcatgaaattcgccaa
cattttcaacaaggtgttatcaaaaagaatgaatttaagatcgtgtatgttgctccaatg
aaagccttggcagcagaaatgacaaactacttcagcaaacgactggagccactgggcatt
attgttaaagaactcactggtgatatgcagttgtcaaaaagtgaaattttgcgaactcag
atgcttgtgaccacaccagaaaaatgggatgtagtgacaaggaaaagtgttggggatgta
gctctttcccagattgtaaagcttcttatccttgacgaagttcacttgctgcatgaagac
agaggcccagtattagagagcattgtcgctcgtactttacgccaggttgaatccacacag
agtatgataaggattcttggcctttctgctaccttacccaactacctcgatgttgcacag
tttttacatgttaatcccttcattggactcttctactttgatggccgttttcgacccgtt
cctcttggacagacgtttttgggagttaaaagtgcaaataaggtgcagcaactgaataac
atggatgaagtatgctatgaaagtgttttgaagcaagtaaaggctggacaccaggtgatg
gtatttgtccatgctcgaaatgccacagtaagaacagccatgtctcttatagaaagagca
aaaaataatggccaaatttcctgctttttgcctgcacaaggacctgaatatggacatgca
gaaaaacaggttcagcggtcaagaaataagcaagtaagagaattattcctagatggcttt
agcattcaccatgctggaatgcttcggcaggacagaaatttggttgaacacttgttttct
aatggccatgtcaaagtcctagtctgtacagctacattagcctggggtgtcaatctccct
gctcatgctgttattattaagggaacacaaatatatgatgcaaaaagaggctcctttgtt
gaccttggaattttagatgtcatgcagatatttggtcgagctggaagaccacagtttgat
gtgtttggggaaggaattatcatcacaactcatgataaactcagccattatctcactttg
ctcactcaacaaaatccaattgagagtcagtttctggaaagccttgcggataacctcaat
gcagagattgctctgggaacagttactaatgtggaagaagcagtgaagtggataagttac
acttatctttatgtacggatgagagcaaatccattagtatatggcatcagtcacaaagct
tatcagatggaccgaacattagcaaaacatcgagaacagttggtcattgaagttggccga
aaactagacaaagctcggatgattcgttttgaggagcgaactgggtatttttcttcaaca
gacttgggtagaaccgccagccactactatattaaatatagtaccattgagaccttcaat
gaactctttgatgctcacaaaacagaaagtgatatttttgctatagtctcaaaagctgaa
gaatttgatcaaattaaggtgagagaagaggaaatagaggagctagatacattattaaac
aacttctgtgaactctccgcacctggaggtgtagagaacagttatgggaaaataaatatc
ctacttcagacttatatcagccgaggggagatggacagtttctcccttatatcagattct
gcttatgttgcacagaatgcagctagaattgtccgtgctcttttcgaaattgctctgagg
aaacgctggcctgccatgacctacaagctcctgaatcttagtaaagtcatcgacaagagg
ctttggggttgggctagccctttgaggcaattttcagtcttaccaccacacattctgaca
agattagaagagaaaaatcttagcgtggataaactgaaagacatgaggaaagatgaaata
ggtcacatgctgcatcatgtgaatattggcctcaaggtcaagcagtgtgttcatcagatt
ccatcagttacaatggaagcatccattcagcccatcacacgaactgtcctccgagtaacg
ctgagcatctctcctgatttctcatggagtgatcaggtccatggaacagtaggagaaccc
tggtggatttgggtggaagatccaacaaatgatcatatttatcattcagagtactttctc
attctaaaaaaacaggtcattagtaaagaagcgcaagtgctggtgtttacaattcctatt
tttgagcctttgccttcccaatactacatccgagcagtgtctgatagatggctgggagct
gaggctgtatgtattatcaattttcaacacctgattctaccagagagacatcctccacat
acagaattactggatcttcagcctctaccagtcacagctttgggatgtgaggcctatgaa
gctttgtacaatttcagccacttcaatcctgtacagacgcagatatttcacactctctac
catacagactgtaatgtcttactgggagcacccactggatcaggaaagacggttgcagct
gaattagccattttcagaatcttcaacaagtaccctacctcaaaggccgtatatattgca
cccctaaaagccctagtacgtgaaagaatggatgactggaaagttaggatagaagaaaaa
cttggaaaacgtgttattgaattaacaggagatgttactcctgatatgaaatccatcgcc
aaagctgaccttatcgtcaccacacccgagaagtgggatggagtcagcaggagctggcag
aatcggaactatgtaaagcaggtcactattctcatcatcgatgagatccatctacttggg
gaagaaagaggccctgttctagaggtcattgtatcgagaacaaattttatctcatcacac
acagaaaagcctgttagaatagttggactatctactgcattagccaatgccagagacctt
gctgactggctcaatattaatcagatgggcttgttcaatttccgaccatcagtacgtcca
gttccactagaagttcacattcaaggtttcccaggtcaacattactgtcctcggatggct
agtatgaataagcctacattccaggcaattagaagccattctccagccaaacctgttttg
atatttgtctcctcaagacgtcaaactcgtcttactgctttggaattgatagccttcctg
gccactgaagaagatccaaagcaatggctgaatatggatgaaagagagatggagaacatc
attggaactctaagagattccaacctgaagctgacccttgcttttggcatagggatgcat
catgctggattacatgaaagggaccgaaaaactgtagaggagctatttgtaaattgcaaa
gttcaggttcttattgccacaagtacattagcctggggtgtcaatttcccagctcattta
gtaattattaagggaacagaatattatgatgggaaaacaagacgttatgtggactttcca
attacagatgtactccaaatgatggggcgtgccggaagacctcagtttgatgatcaaggc
aaagctgtaattctggttcatgacatcaagaaagatttttacaaaaaatttctttatgaa
cctttcccagtagagtcaagcttgttaggcgtgcttgctgaccatttaaatgcagaaatt
gctgctggcactataacatctaagcaagatgctatggattatataacatggacttacttc
tttcgacgtctgatcatgaaccccagctactataatttgagtgatgtgagccatgattct
gtgaacaagtttctatccaatctggttgagaaatccctgattgaattggagcattcctat
tgtcttgaaattggagaggataatcggagcattgaacctctgacatatggtcgaattgcc
tcttactattatctgaagcatcaaactgttaaaatgttcaaggagcgtttgaaacctgag
tgtggtgttgaagaattgctctcaattctaagtgatgcagaagaatatacagatttgcca
gtgagacacaatgaagatcatatgaatagtgaactggccaaatgccttcccttagaaaca
aatcctcattcatttgacagtcctcacaccaaagcatacctactcctgcaggcccacctc
agccgcaccatgcttccctgcccagattacgacactgacaccaaaacagttttggaccaa
gctctcagagtttgtcaggcaatgctggatgtggctgcagaccaaggctggctggtgacc
actctgagtatcaccaatctggtccagatggtaatccagggccgatggttaaaagactct
tctcttctgacaataccaaacatcgaacaccatcacctttacattttcaggaaatggagc
tcaaatacaaagggctcccatgccggaggccacagtggccctatcgaatgccttccagag
ctgatccaggcctgtggagggcaagaccgtgtattcagctccatgattggaaaagagctc
cctgaagttaaaatgaagcaggcatggagcttcgtatcccacttaccagtgatagatgtt
agcttaagtgttaaaggctggtgggatgactcagttgaaggacataatgaactctctatc
acaactctgacttcagacaagcgaaatgacaacagatgggtcaagttgcatgctgatcaa
gagtatgtgcttcaagtcagcttgcagagaatccacactgggttccacaagggaaggcca
gacaaccatgcagcaacccctcgatttcccaaattaaaagatgaaggctggtttttgata
ttaggagaagtggacaagagagaacttattgctttgaagagagtcagctatgttagaagt
cagagtgttgtctccatttctttttatacccctgaagtacccggaaggtatatctatacc
ctttatttcatgagtgactgctacctgggcttggaccagcagtatgacattcatctcaat
gtgacaccggcaagcatttcctcacggaacagtgaggaggtctctgattctttccacgac
ttgaaagtgaagtaa
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integrated database retrieval system
