Sorex fumeus (smoky shrew): 130033438
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Entry
130033438 CDS
T10594
Symbol
RARS2
Name
(RefSeq) probable arginine--tRNA ligase, mitochondrial isoform X1
KO
K01887
arginyl-tRNA synthetase [EC:
6.1.1.19
]
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
130033438 (RARS2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sfum01007
]
130033438 (RARS2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfum03016
]
130033438 (RARS2)
03029 Mitochondrial biogenesis [BR:
sfum03029
]
130033438 (RARS2)
Enzymes [BR:
sfum01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.19 arginine---tRNA ligase
130033438 (RARS2)
Amino acid related enzymes [BR:
sfum01007
]
Aminoacyl-tRNA synthetase
Class I (G)
130033438 (RARS2)
Transfer RNA biogenesis [BR:
sfum03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
130033438 (RARS2)
Prokaryotic type
Other AARSs
130033438 (RARS2)
Mitochondrial biogenesis [BR:
sfum03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
130033438 (RARS2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1d
DALR_1
Motif
Other DBs
NCBI-GeneID:
130033438
NCBI-ProteinID:
XP_055981138
LinkDB
All DBs
Position
Unknown
AA seq
578 aa
AA seq
DB search
MACGFRRSIARQLSRVLDLPPENLIKSISAVPISKKQEVADFQLSVDSLLKSSDDHSRPN
IQDQAIRLAEKLKCDTVVSEISTGEGTVNFKINRELLTKTVLQQVIEDGSKYGLKSELFS
GLPQKKIVIEFSSPNVAKKFHVGHLRSTIIGNFIANLKEALGHQVTRMNYLGDWGMQFGL
LGTGFQLFGYEEKLQCNPLQHLFEIYVQINKEAAEDESITKSAQKFFQRLEVGDLQALAL
WQRFRDLSIEEYIRIYKRLGVHFDEYSGESFYREKSQEVLKLLDSKGLLQKTIKGTAVVD
LSGNGDPSSVCTVMRSDGTSLYATRDLAAAIDRMDKYNFDTMIYVTDKGQRKHFQQVFQM
LQIMGYDWAQRCQHIPFGVIRGMKTRRGDVTFLEDVLNEIQLRMLQNMSSVKTTKELENP
KETAEKVGLAALIIQDFKGSLSSDYQFSWDRVLQSRGDTGVFLQYTHARLHSLEETFGCG
YLDDFNTPYLQEPQCISVIQHLLRFDEVLYRSSQDLEPKHIVNYLLTLSHLAAVAHKTLH
IRDSPPEVAGARLHLFRAVRSVLANGMKLLGITPVCKM
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggcgtgcggcttccgcaggtccatcgcccggcagctttccagagtgttggatcttcct
ccagaaaacttgatcaagtcaatatctgcagttccaatttcaaaaaaacaagaagtagct
gattttcagctttctgtggattctctattaaaaagcagtgatgaccattcgagaccaaac
attcaagatcaagccattagattggcagagaagctaaaatgtgatacagtggtgagtgaa
ataagcactggtgaaggaactgtaaatttcaaaataaacagagaactattaacaaagact
gtgttacaacaagtaatcgaagatggctcaaaatacggattaaaaagtgagcttttttct
ggtcttcctcaaaaaaaaattgtgattgaattcagttcacctaatgttgccaagaaattt
catgttggacatttgcgttctaccatcataggaaattttatagcaaatctcaaagaagct
ttaggacatcaggtaacaagaatgaattaccttggagattggggtatgcagtttggtctt
ttggggacgggctttcagctatttggctatgaagaaaaactgcagtgcaatcctttacag
catctctttgaaatttacgtacaaattaataaagaagcagcagaagatgaaagtataaca
aagtcagcacagaagtttttccagcgattggaagtgggtgacttgcaagcacttgcactg
tggcaaagatttcgggacttgagcattgaagagtatattcgaatttacaagcgtcttgga
gtacattttgatgaatactcaggagaatcattttatcgtgaaaaatctcaagaagtctta
aaattgctggacagtaaaggactcctgcagaaaaccataaaaggaacagctgtagtagat
ctgtctgggaatggcgacccctcctccgtctgtactgtaatgcgaagtgatgggacttct
ctctatgcaacgagagatcttgctgcagctatagatcgaatggacaagtataattttgac
acaatgatttatgtgacagataaagggcaaagaaaacattttcagcaagtcttccaaatg
ctgcagattatgggatatgattgggcacaaaggtgccagcacataccgtttggagtaatt
cggggtatgaagacgcgaagaggagatgttacttttctagaagatgttttaaatgagatt
cagttaagaatgctacagaacatgtcttctgttaaaactaccaaagaactggagaaccca
aaggagacagccgagaaggttgggcttgctgcgctcattattcaggacttcaaaggctca
ctctcttctgactatcagttcagctgggatcgtgttttgcagagtcgtggggacactgga
gtcttcctgcagtatacacatgcccgcctccacagcttggaagaaacatttgggtgtggt
tatctagatgacttcaacactccttatttacaagagccgcaatgtatttcagttatccag
catcttctcagattcgatgaggtgctttatcgatcatctcaggaccttgaacccaagcac
attgtcaattaccttctaactctaagtcatcttgcagctgtggcacacaaaacattgcat
ataagagatagtcctcctgaagtggccggggctagacttcatcttttcagagctgttcgt
tctgttctagccaacggaatgaaacttcttggaataactcctgtatgtaagatgtaa
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