Sorex fumeus (smoky shrew): 130033528
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Entry
130033528 CDS
T10594
Symbol
VPS28
Name
(RefSeq) vacuolar protein sorting-associated protein 28 homolog
KO
K12184
ESCRT-I complex subunit VPS28
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
130033528 (VPS28)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfum04131
]
130033528 (VPS28)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sfum04147
]
130033528 (VPS28)
Membrane trafficking [BR:
sfum04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
130033528 (VPS28)
Exosome [BR:
sfum04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
130033528 (VPS28)
Exosomal proteins of other body fluids (saliva and urine)
130033528 (VPS28)
Exosomal proteins of colorectal cancer cells
130033528 (VPS28)
Exosomal proteins of bladder cancer cells
130033528 (VPS28)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS28
Motif
Other DBs
NCBI-GeneID:
130033528
NCBI-ProteinID:
XP_055981266
LinkDB
All DBs
Position
Unknown
AA seq
221 aa
AA seq
DB search
MFHGIPATQAGGGPGNKPELYEEVKLYKNAREREKYDNMAELFAVVKTMQALEKAYIKDC
VTPNEYTAACSRLLVQYKAAFRQVQGSEIGSIDEFCRKFRLDCPLAMERIKEDRPITIKD
DKGNLNRCIADVVSLFITVMDKLRLEIRAMDEIQPDLRELMETMHRMSHLPPDFEGRQTV
SQWLQTLSGMSASDELDDSQVRQMLFDLESAYNAFNRFLHA
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgttccatgggatcccagccacgcaggccgggggaggccctgggaacaagcccgagctg
tacgaggaggtgaagctgtacaagaatgcccgggagcgggagaagtacgacaacatggca
gaactgtttgcggtggtgaagaccatgcaggccctggagaaggcctacatcaaggactgc
gtcacccccaacgagtacacagccgcctgctcccgcctcctggtccagtacaaagctgcc
ttccggcaggtccagggctcagagatcggctccattgatgagttctgtcgcaagttccgg
ctggactgtccactcgccatggagaggatcaaggaggaccggcccatcacgatcaaggac
gacaagggcaacctgaaccgctgcattgctgacgtggtctcgctcttcatcacggtgatg
gacaaactgcgcttggagatccgagccatggacgagatccagcctgacctgcgggagctg
atggagaccatgcaccgcatgagccatctgcctccagacttcgagggccgccagaccgtc
agccagtggctgcagaccctgagtggcatgtcagcatcagatgagctggatgactcccag
gtgcgccagatgctgttcgacctggagtcggcctataacgcctttaaccgcttcctacac
gcctga
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